RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 CEP162Q5TB80 1403 aa20.5■□□□□ 0.87
KDM3A-201ENST00000312912 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
KDM3A-201ENST00000312912 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
KDM3A-201ENST00000312912 WDR43Q15061 677 aaKnown RBP eCLIP20.45■□□□□ 0.86
KDM3A-201ENST00000312912 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
KDM3A-201ENST00000312912 RTN4Q9NQC3 1192 aaKnown RBP20.42■□□□□ 0.86
KDM3A-201ENST00000312912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.865e-7■■□□□ 12.9
KDM3A-201ENST00000312912 TNIKQ9UKE5 1360 aa20.41■□□□□ 0.86
KDM3A-201ENST00000312912 ERICH6BQ5W0A0 696 aa20.41■□□□□ 0.86
KDM3A-201ENST00000312912 KDM2AQ9Y2K7 1162 aa20.41■□□□□ 0.86
KDM3A-201ENST00000312912 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
KDM3A-201ENST00000312912 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
KDM3A-201ENST00000312912 DEKP35659 375 aaKnown RBP20.35■□□□□ 0.85
KDM3A-201ENST00000312912 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
KDM3A-201ENST00000312912 IRX6P78412 446 aaPredicted RBP20.35■□□□□ 0.85
KDM3A-201ENST00000312912 WRNQ14191 1432 aaPredicted RBP eCLIP20.34■□□□□ 0.85
KDM3A-201ENST00000312912 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
KDM3A-201ENST00000312912 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
KDM3A-201ENST00000312912 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
KDM3A-201ENST00000312912 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
KDM3A-201ENST00000312912 PLEKHD1A6NEE1 506 aa20.21■□□□□ 0.83
KDM3A-201ENST00000312912 DDRGK1Q96HY6 314 aa20.2■□□□□ 0.82
KDM3A-201ENST00000312912 NAP1L5Q96NT1 182 aaPredicted RBP20.2■□□□□ 0.82
KDM3A-201ENST00000312912 PPM1GO15355 546 aaPredicted RBP20.19■□□□□ 0.82
KDM3A-201ENST00000312912 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
KDM3A-201ENST00000312912 ARXQ96QS3 562 aa20.17■□□□□ 0.82
KDM3A-201ENST00000312912 NOP58Q9Y2X3 529 aaKnown RBP20.16■□□□□ 0.82
KDM3A-201ENST00000312912 CDCA8Q53HL2 280 aa20.15■□□□□ 0.82
KDM3A-201ENST00000312912 BECN1Q14457 450 aa20.15■□□□□ 0.82
KDM3A-201ENST00000312912 PRKCSHP14314 528 aaPredicted RBP20.14■□□□□ 0.81
KDM3A-201ENST00000312912 TIMELESSQ9UNS1 1208 aa20.14■□□□□ 0.81
KDM3A-201ENST00000312912 MYH16Q9H6N6 1097 aa20.14■□□□□ 0.81
KDM3A-201ENST00000312912 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
KDM3A-201ENST00000312912 CFDP1Q9UEE9 299 aaPredicted RBP20.12■□□□□ 0.81
KDM3A-201ENST00000312912 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.11■□□□□ 0.81
KDM3A-201ENST00000312912 RGL3Q3MIN7 710 aa20.1■□□□□ 0.81
KDM3A-201ENST00000312912 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
KDM3A-201ENST00000312912 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
KDM3A-201ENST00000312912 CDK11BP21127 795 aaKnown RBP20.09■□□□□ 0.81
KDM3A-201ENST00000312912 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
KDM3A-201ENST00000312912 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.81
KDM3A-201ENST00000312912 RBM19Q9Y4C8 960 aaKnown RBP20.08■□□□□ 0.81
KDM3A-201ENST00000312912 KCNH8Q96L42 1107 aa20.08■□□□□ 0.8
KDM3A-201ENST00000312912 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.8
KDM3A-201ENST00000312912 CCNB3Q8WWL7 1395 aa20.07■□□□□ 0.8
KDM3A-201ENST00000312912 NCLP19338 710 aaKnown RBP20.06■□□□□ 0.8
KDM3A-201ENST00000312912 CFAP53Q96M91 514 aa20.05■□□□□ 0.8
KDM3A-201ENST00000312912 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
KDM3A-201ENST00000312912 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
KDM3A-201ENST00000312912 TSHZ2Q9NRE2 1034 aa20■□□□□ 0.79
KDM3A-201ENST00000312912 ARID4BQ4LE39 1312 aaPredicted RBP19.99■□□□□ 0.79
KDM3A-201ENST00000312912 CCER2I3L3R5 266 aa19.98■□□□□ 0.79
KDM3A-201ENST00000312912 GOLGA6L22H0YM25 854 aa19.98■□□□□ 0.79
KDM3A-201ENST00000312912 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
KDM3A-201ENST00000312912 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
KDM3A-201ENST00000312912 LAS1LQ9Y4W2 734 aaKnown RBP19.92■□□□□ 0.78
KDM3A-201ENST00000312912 SOGA1O94964 1423 aa19.92■□□□□ 0.78
KDM3A-201ENST00000312912 SENP3-EIF4A1A0A087X0R7 540 aa19.91■□□□□ 0.78
KDM3A-201ENST00000312912 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
KDM3A-201ENST00000312912 PPP1R15AO75807 674 aaPredicted RBP19.9■□□□□ 0.78
KDM3A-201ENST00000312912 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
KDM3A-201ENST00000312912 FTSJ3Q8IY81 847 aaKnown RBP19.88■□□□□ 0.77
KDM3A-201ENST00000312912 NUDCQ9Y266 331 aa19.87■□□□□ 0.77
KDM3A-201ENST00000312912 SETD5Q9C0A6 1442 aa19.86■□□□□ 0.77
KDM3A-201ENST00000312912 B4GALNT3Q6L9W6 998 aa19.85■□□□□ 0.77
KDM3A-201ENST00000312912 MS4A1P11836 297 aa19.83■□□□□ 0.76
KDM3A-201ENST00000312912 NEUROD2Q15784 382 aa19.83■□□□□ 0.76
KDM3A-201ENST00000312912 MAPK8IP3Q9UPT6 1336 aa19.83■□□□□ 0.76
KDM3A-201ENST00000312912 RGS3P49796 1198 aa19.82■□□□□ 0.76
KDM3A-201ENST00000312912 CHMP4BQ9H444 224 aaKnown RBP19.82■□□□□ 0.76
KDM3A-201ENST00000312912 VSIG10Q8N0Z9 540 aa19.81■□□□□ 0.76
KDM3A-201ENST00000312912 TMF1P82094 1093 aa19.81■□□□□ 0.76
KDM3A-201ENST00000312912 CASC1Q6TDU7 716 aa19.79■□□□□ 0.76
KDM3A-201ENST00000312912 RSPH6AQ9H0K4 717 aa19.79■□□□□ 0.76
KDM3A-201ENST00000312912 DCAF11Q8TEB1 546 aa19.78■□□□□ 0.76
KDM3A-201ENST00000312912 CUX2O14529 1486 aa19.78■□□□□ 0.76
KDM3A-201ENST00000312912 L1TD1Q5T7N2 865 aaKnown RBP19.78■□□□□ 0.76
KDM3A-201ENST00000312912 CC2D1BQ5T0F9 858 aaKnown RBP19.77■□□□□ 0.75
KDM3A-201ENST00000312912 FRAT1Q92837 279 aaPredicted RBP19.77■□□□□ 0.75
KDM3A-201ENST00000312912 HSPA5P11021 654 aaKnown RBP19.76■□□□□ 0.75
KDM3A-201ENST00000312912 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
KDM3A-201ENST00000312912 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
KDM3A-201ENST00000312912 PNNQ9H307 717 aaKnown RBP19.75■□□□□ 0.75
KDM3A-201ENST00000312912 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
KDM3A-201ENST00000312912 DNTTIP2Q5QJE6 756 aaKnown RBP19.72■□□□□ 0.75
KDM3A-201ENST00000312912 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
KDM3A-201ENST00000312912 HSP90AA2PQ14568 343 aaPredicted RBP19.71■□□□□ 0.75
KDM3A-201ENST00000312912 POGKQ9P215 609 aa19.71■□□□□ 0.75
KDM3A-201ENST00000312912 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
KDM3A-201ENST00000312912 PKNOX2Q96KN3 472 aa19.71■□□□□ 0.75
KDM3A-201ENST00000312912 ARHGAP35Q9NRY4 1499 aa19.7■□□□□ 0.74
KDM3A-201ENST00000312912 PTMAP06454 111 aaKnown RBP19.69■□□□□ 0.74
KDM3A-201ENST00000312912 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
KDM3A-201ENST00000312912 CCDC88BA6NC98 1476 aa19.68■□□□□ 0.74
KDM3A-201ENST00000312912 AMER1Q5JTC6 1135 aaPredicted RBP19.67■□□□□ 0.74
KDM3A-201ENST00000312912 ZBTB7CA1YPR0 619 aa19.66■□□□□ 0.74
KDM3A-201ENST00000312912 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
KDM3A-201ENST00000312912 U2SURPO15042 1029 aaKnown RBP19.65■□□□□ 0.74
KDM3A-201ENST00000312912 PKD2Q13563 968 aa19.65■□□□□ 0.74
KDM3A-201ENST00000312912 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms