RNA–Protein interactions for RNA: ENST00000311437.10

ZNF490-201, Transcript of zinc finger protein 490, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF490, Length 4,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-201ENST00000311437 ERICH6BQ5W0A0 696 aa9.4□□□□□ -0.9
ZNF490-201ENST00000311437 IRX6P78412 446 aaPredicted RBP9.37□□□□□ -0.91
ZNF490-201ENST00000311437 NOP58Q9Y2X3 529 aaKnown RBP9.36□□□□□ -0.91
ZNF490-201ENST00000311437 FANCD2Q9BXW9 1451 aa9.36□□□□□ -0.91
ZNF490-201ENST00000311437 NEFMP07197 916 aa9.34□□□□□ -0.91
ZNF490-201ENST00000311437 DDX10Q13206 875 aaKnown RBP9.33□□□□□ -0.92
ZNF490-201ENST00000311437 HNRNPUQ00839 825 aaKnown RBP eCLIP9.33□□□□□ -0.92
ZNF490-201ENST00000311437 CNGB1Q14028 1251 aaPredicted RBP9.33□□□□□ -0.92
ZNF490-201ENST00000311437 CYB5RLQ6IPT4 315 aa9.32□□□□□ -0.92
ZNF490-201ENST00000311437 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
ZNF490-201ENST00000311437 SALL2Q9Y467 1007 aaPredicted RBP9.3□□□□□ -0.92
ZNF490-201ENST00000311437 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
ZNF490-201ENST00000311437 POLR3GLQ9BT43 218 aa9.26□□□□□ -0.93
ZNF490-201ENST00000311437 PKNOX2Q96KN3 472 aa9.25□□□□□ -0.93
ZNF490-201ENST00000311437 LAS1LQ9Y4W2 734 aaKnown RBP9.24□□□□□ -0.93
ZNF490-201ENST00000311437 PPM1GO15355 546 aaPredicted RBP9.23□□□□□ -0.93
ZNF490-201ENST00000311437 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
ZNF490-201ENST00000311437 NESP48681 1621 aa9.22□□□□□ -0.93
ZNF490-201ENST00000311437 FANCIQ9NVI1 1328 aa9.22□□□□□ -0.93
ZNF490-201ENST00000311437 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
ZNF490-201ENST00000311437 NAP1L5Q96NT1 182 aaPredicted RBP9.21□□□□□ -0.93
ZNF490-201ENST00000311437 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.94
ZNF490-201ENST00000311437 SOGA1O94964 1423 aa9.21□□□□□ -0.94
ZNF490-201ENST00000311437 TOP2AP11388 1531 aaKnown RBP9.21□□□□□ -0.94
ZNF490-201ENST00000311437 ARXQ96QS3 562 aa9.2□□□□□ -0.94
ZNF490-201ENST00000311437 ESF1Q9H501 851 aaKnown RBP9.2□□□□□ -0.94
ZNF490-201ENST00000311437 CFTRP13569 1480 aa9.19□□□□□ -0.94
ZNF490-201ENST00000311437 FAM50AQ14320 339 aaKnown RBP9.18□□□□□ -0.94
ZNF490-201ENST00000311437 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
ZNF490-201ENST00000311437 PEG3Q9GZU2 1588 aa9.18□□□□□ -0.94
ZNF490-201ENST00000311437 B4GALNT3Q6L9W6 998 aa9.17□□□□□ -0.94
ZNF490-201ENST00000311437 PODXL2Q9NZ53 605 aa9.17□□□□□ -0.94
ZNF490-201ENST00000311437 WRNQ14191 1432 aaPredicted RBP eCLIP9.16□□□□□ -0.94
ZNF490-201ENST00000311437 P3H3Q8IVL6 736 aa9.16□□□□□ -0.94
ZNF490-201ENST00000311437 FAM9BQ8IZU0 186 aa9.16□□□□□ -0.94
ZNF490-201ENST00000311437 CARMIL2Q6F5E8 1435 aa9.16□□□□□ -0.94
ZNF490-201ENST00000311437 IL27Q8NEV9 243 aa9.16□□□□□ -0.94
ZNF490-201ENST00000311437 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
ZNF490-201ENST00000311437 WIZO95785 1651 aa9.15□□□□□ -0.94
ZNF490-201ENST00000311437 RSPH6AQ9H0K4 717 aa9.15□□□□□ -0.95
ZNF490-201ENST00000311437 ARID3CA6NKF2 412 aa9.13□□□□□ -0.95
ZNF490-201ENST00000311437 DDRGK1Q96HY6 314 aa9.12□□□□□ -0.95
ZNF490-201ENST00000311437 SLC24A1O60721 1099 aa9.12□□□□□ -0.95
ZNF490-201ENST00000311437 GRIN2BQ13224 1484 aa9.12□□□□□ -0.95
ZNF490-201ENST00000311437 HSP90AA1P07900 732 aaKnown RBP9.12□□□□□ -0.95
ZNF490-201ENST00000311437 HIRIP3Q9BW71 556 aaPredicted RBP9.12□□□□□ -0.95
ZNF490-201ENST00000311437 WDR62O43379 1518 aa9.12□□□□□ -0.95
ZNF490-201ENST00000311437 IPO9Q96P70 1041 aaKnown RBP9.11□□□□□ -0.95
ZNF490-201ENST00000311437 SYNJ1O43426 1573 aa9.1□□□□□ -0.95
ZNF490-201ENST00000311437 MSH5O43196 834 aa9.09□□□□□ -0.95
ZNF490-201ENST00000311437 HSP90AA2PQ14568 343 aaPredicted RBP9.09□□□□□ -0.95
ZNF490-201ENST00000311437 ANP32BQ92688 251 aaKnown RBP9.09□□□□□ -0.95
ZNF490-201ENST00000311437 KCNH8Q96L42 1107 aa9.08□□□□□ -0.96
ZNF490-201ENST00000311437 TDRD9Q8NDG6 1382 aaKnown RBP9.07□□□□□ -0.96
ZNF490-201ENST00000311437 TNNT2P45379 298 aaPredicted RBP9.07□□□□□ -0.96
ZNF490-201ENST00000311437 PNNQ9H307 717 aaKnown RBP9.07□□□□□ -0.96
ZNF490-201ENST00000311437 MAGI1Q96QZ7 1491 aaPredicted RBP9.06□□□□□ -0.96
ZNF490-201ENST00000311437 ARID4BQ4LE39 1312 aaPredicted RBP9.06□□□□□ -0.96
ZNF490-201ENST00000311437 MRS2Q9HD23 443 aa9.06□□□□□ -0.96
ZNF490-201ENST00000311437 A0A0U1RQG5 324 aaPredicted RBP9.06□□□□□ -0.96
ZNF490-201ENST00000311437 TRIM44Q96DX7 344 aaPredicted RBP9.06□□□□□ -0.96
ZNF490-201ENST00000311437 USP35Q9P2H5 1018 aa9.06□□□□□ -0.96
ZNF490-201ENST00000311437 DNMBPQ6XZF7 1577 aa9.05□□□□□ -0.96
ZNF490-201ENST00000311437 KIF27Q86VH2 1401 aa9.05□□□□□ -0.96
ZNF490-201ENST00000311437 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
ZNF490-201ENST00000311437 TOPBP1Q92547 1522 aa9.04□□□□□ -0.96
ZNF490-201ENST00000311437 CCDC88BA6NC98 1476 aa9.04□□□□□ -0.96
ZNF490-201ENST00000311437 FAM69CQ0P6D2 419 aa9.04□□□□□ -0.96
ZNF490-201ENST00000311437 CCER2I3L3R5 266 aa9.03□□□□□ -0.96
ZNF490-201ENST00000311437 GAPVD1Q14C86 1478 aa9.02□□□□□ -0.97
ZNF490-201ENST00000311437 SLC4A1APQ9BWU0 796 aaKnown RBP9.02□□□□□ -0.97
ZNF490-201ENST00000311437 GSE1Q14687 1217 aa9.01□□□□□ -0.97
ZNF490-201ENST00000311437 JPH4Q96JJ6 628 aa9.01□□□□□ -0.97
ZNF490-201ENST00000311437 WDR97A6NE52 1622 aa9□□□□□ -0.97
ZNF490-201ENST00000311437 BRPF3Q9ULD4 1205 aa9□□□□□ -0.97
ZNF490-201ENST00000311437 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
ZNF490-201ENST00000311437 SYNJ2O15056 1496 aa8.99□□□□□ -0.97
ZNF490-201ENST00000311437 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
ZNF490-201ENST00000311437 PAK3O75914 559 aaPredicted RBP8.99□□□□□ -0.97
ZNF490-201ENST00000311437 FHAD1B1AJZ9 1412 aa8.99□□□□□ -0.97
ZNF490-201ENST00000311437 TONSLQ96HA7 1378 aa8.99□□□□□ -0.97
ZNF490-201ENST00000311437 UPF2Q9HAU5 1272 aaKnown RBP8.98□□□□□ -0.97
ZNF490-201ENST00000311437 AQRO60306 1485 aaKnown RBP eCLIP8.98□□□□□ -0.97
ZNF490-201ENST00000311437 NCLP19338 710 aaKnown RBP8.97□□□□□ -0.97
ZNF490-201ENST00000311437 CDK11BP21127 795 aaKnown RBP8.97□□□□□ -0.97
ZNF490-201ENST00000311437 BECN1Q14457 450 aa8.96□□□□□ -0.98
ZNF490-201ENST00000311437 SNAPC4Q5SXM2 1469 aa8.96□□□□□ -0.98
ZNF490-201ENST00000311437 PTPRGP23470 1445 aa8.95□□□□□ -0.98
ZNF490-201ENST00000311437 CEP162Q5TB80 1403 aa8.95□□□□□ -0.98
ZNF490-201ENST00000311437 KIF21AQ7Z4S6 1674 aa8.95□□□□□ -0.98
ZNF490-201ENST00000311437 FGD5Q6ZNL6 1462 aa8.94□□□□□ -0.98
ZNF490-201ENST00000311437 URB2Q14146 1524 aaKnown RBP8.94□□□□□ -0.98
ZNF490-201ENST00000311437 PLEKHD1A6NEE1 506 aa8.94□□□□□ -0.98
ZNF490-201ENST00000311437 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
ZNF490-201ENST00000311437 ZNF326Q5BKZ1 582 aaKnown RBP8.93□□□□□ -0.98
ZNF490-201ENST00000311437 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
ZNF490-201ENST00000311437 ZMYND15Q9H091 742 aa8.93□□□□□ -0.98
ZNF490-201ENST00000311437 TMC1Q8TDI8 760 aa8.93□□□□□ -0.98
ZNF490-201ENST00000311437 ARHGEF11O15085 1522 aa8.92□□□□□ -0.98
ZNF490-201ENST00000311437 POLA1P09884 1462 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms