RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 RSPH4AQ5TD94 716 aa4.26□□□□□ -1.73
CLOCK-201ENST00000309964 CHGAP10645 457 aaKnown RBP4.26□□□□□ -1.73
CLOCK-201ENST00000309964 MYH16Q9H6N6 1097 aa4.25□□□□□ -1.73
CLOCK-201ENST00000309964 LOC105371045A0A1W2PR82 267 aa4.25□□□□□ -1.73
CLOCK-201ENST00000309964 CFAP44Q96MT7 982 aa4.25□□□□□ -1.73
CLOCK-201ENST00000309964 WDR43Q15061 677 aaKnown RBP eCLIP4.24□□□□□ -1.73
CLOCK-201ENST00000309964 ARID4BQ4LE39 1312 aaPredicted RBP4.24□□□□□ -1.73
CLOCK-201ENST00000309964 CDK11BP21127 795 aaKnown RBP4.24□□□□□ -1.73
CLOCK-201ENST00000309964 C14orf37Q86TY3 774 aa4.24□□□□□ -1.73
CLOCK-201ENST00000309964 PPARGC1BQ86YN6 1023 aaKnown RBP4.24□□□□□ -1.73
CLOCK-201ENST00000309964 CFAP53Q96M91 514 aa4.24□□□□□ -1.73
CLOCK-201ENST00000309964 HSP90AA1P07900 732 aaKnown RBP4.24□□□□□ -1.73
CLOCK-201ENST00000309964 TMC1Q8TDI8 760 aa4.23□□□□□ -1.73
CLOCK-201ENST00000309964 ANP32EQ9BTT0 268 aa4.23□□□□□ -1.73
CLOCK-201ENST00000309964 CFDP1Q9UEE9 299 aaPredicted RBP4.23□□□□□ -1.73
CLOCK-201ENST00000309964 HMGB2P26583 209 aaKnown RBP4.23□□□□□ -1.73
CLOCK-201ENST00000309964 MS4A1P11836 297 aa4.22□□□□□ -1.73
CLOCK-201ENST00000309964 P3H3Q8IVL6 736 aa4.22□□□□□ -1.73
CLOCK-201ENST00000309964 TIMELESSQ9UNS1 1208 aa4.22□□□□□ -1.73
CLOCK-201ENST00000309964 ANP32AP39687 249 aaKnown RBP4.22□□□□□ -1.73
CLOCK-201ENST00000309964 FMN1Q68DA7 1419 aa4.22□□□□□ -1.73
CLOCK-201ENST00000309964 NUDCQ9Y266 331 aa4.21□□□□□ -1.74
CLOCK-201ENST00000309964 HDAC5Q9UQL6 1122 aa4.21□□□□□ -1.74
CLOCK-201ENST00000309964 KAT6BQ8WYB5 2073 aa4.21□□□□□ -1.74
CLOCK-201ENST00000309964 SCAF1Q9H7N4 1312 aaKnown RBP4.19□□□□□ -1.74
CLOCK-201ENST00000309964 CNGB1Q14028 1251 aaPredicted RBP4.19□□□□□ -1.74
CLOCK-201ENST00000309964 CASC1Q6TDU7 716 aa4.19□□□□□ -1.74
CLOCK-201ENST00000309964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.19□□□□□ -1.741e-6■■□□□ 12.2
CLOCK-201ENST00000309964 KNSTRNQ9Y448 316 aa4.19□□□□□ -1.74
CLOCK-201ENST00000309964 TMX4Q9H1E5 349 aaPredicted RBP4.18□□□□□ -1.74
CLOCK-201ENST00000309964 TRHP20396 242 aaPredicted RBP4.18□□□□□ -1.74
CLOCK-201ENST00000309964 FOXD1Q16676 465 aa4.18□□□□□ -1.74
CLOCK-201ENST00000309964 CCNB3Q8WWL7 1395 aa4.18□□□□□ -1.74
CLOCK-201ENST00000309964 CCDC18Q5T9S5 1454 aa4.18□□□□□ -1.74
CLOCK-201ENST00000309964 CALD1Q05682 793 aaKnown RBP4.18□□□□□ -1.74
CLOCK-201ENST00000309964 KCNH8Q96L42 1107 aa4.17□□□□□ -1.74
CLOCK-201ENST00000309964 TNIKQ9UKE5 1360 aa4.17□□□□□ -1.74
CLOCK-201ENST00000309964 UACAQ9BZF9 1416 aa4.17□□□□□ -1.74
CLOCK-201ENST00000309964 EFCAB2Q5VUJ9 269 aa4.17□□□□□ -1.74
CLOCK-201ENST00000309964 NPHP1O15259 732 aa4.16□□□□□ -1.74
CLOCK-201ENST00000309964 STAC3Q96MF2 364 aa4.16□□□□□ -1.74
CLOCK-201ENST00000309964 EIF3AQ14152 1382 aaKnown RBP4.16□□□□□ -1.74
CLOCK-201ENST00000309964 POGKQ9P215 609 aa4.16□□□□□ -1.74
CLOCK-201ENST00000309964 EID1Q9Y6B2 187 aa4.16□□□□□ -1.74
CLOCK-201ENST00000309964 TOP2AP11388 1531 aaKnown RBP4.16□□□□□ -1.74
CLOCK-201ENST00000309964 CARMIL1Q5VZK9 1371 aa4.16□□□□□ -1.74
CLOCK-201ENST00000309964 MAPK8IP3Q9UPT6 1336 aa4.16□□□□□ -1.74
CLOCK-201ENST00000309964 ZRSR1Q15695 479 aaKnown RBP4.16□□□□□ -1.74
CLOCK-201ENST00000309964 SMARCA4P51532 1647 aa4.15□□□□□ -1.74
CLOCK-201ENST00000309964 CUX2O14529 1486 aa4.15□□□□□ -1.74
CLOCK-201ENST00000309964 SOGA1O94964 1423 aa4.15□□□□□ -1.74
CLOCK-201ENST00000309964 GOLGA6L22H0YM25 854 aa4.15□□□□□ -1.75
CLOCK-201ENST00000309964 CECR2Q9BXF3 1484 aa4.15□□□□□ -1.75
CLOCK-201ENST00000309964 ARID3CA6NKF2 412 aa4.15□□□□□ -1.75
CLOCK-201ENST00000309964 GOLGA2Q08379 1002 aa4.15□□□□□ -1.75
CLOCK-201ENST00000309964 BECN1Q14457 450 aa4.15□□□□□ -1.75
CLOCK-201ENST00000309964 ARHGAP35Q9NRY4 1499 aa4.14□□□□□ -1.75
CLOCK-201ENST00000309964 NCLP19338 710 aaKnown RBP4.14□□□□□ -1.75
CLOCK-201ENST00000309964 CADPSQ9ULU8 1353 aa4.14□□□□□ -1.75
CLOCK-201ENST00000309964 EIF4G1Q04637 1599 aaKnown RBP4.14□□□□□ -1.75
CLOCK-201ENST00000309964 TMF1P82094 1093 aa4.13□□□□□ -1.75
CLOCK-201ENST00000309964 PLPPR3Q6T4P5 718 aa4.13□□□□□ -1.75
CLOCK-201ENST00000309964 WWC1Q8IX03 1113 aa4.13□□□□□ -1.75
CLOCK-201ENST00000309964 NRDCO43847 1150 aa4.13□□□□□ -1.75
CLOCK-201ENST00000309964 L1TD1Q5T7N2 865 aaKnown RBP4.13□□□□□ -1.75
CLOCK-201ENST00000309964 ANKRD30AQ9BXX3 1397 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 OSCARQ8IYS5 282 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 CHMP4CQ96CF2 233 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 CCDC34Q96HJ3 373 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 CHIC2Q9UKJ5 165 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 SETD5Q9C0A6 1442 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 HNRNPUQ00839 825 aaKnown RBP eCLIP4.12□□□□□ -1.75
CLOCK-201ENST00000309964 WASHC2AQ641Q2 1341 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 A0A0G2JS52 829 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 CARD11Q9BXL7 1154 aa4.12□□□□□ -1.75
CLOCK-201ENST00000309964 FTSJ3Q8IY81 847 aaKnown RBP4.11□□□□□ -1.75
CLOCK-201ENST00000309964 KDM2AQ9Y2K7 1162 aa4.11□□□□□ -1.75
CLOCK-201ENST00000309964 HDGFL2Q7Z4V5 671 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-201ENST00000309964 DDRGK1Q96HY6 314 aa4.11□□□□□ -1.75
CLOCK-201ENST00000309964 DCAF8L1A6NGE4 600 aa4.11□□□□□ -1.75
CLOCK-201ENST00000309964 RTF1Q92541 710 aaKnown RBP4.11□□□□□ -1.75
CLOCK-201ENST00000309964 CCDC136Q96JN2 1154 aa4.11□□□□□ -1.75
CLOCK-201ENST00000309964 SPAG9O60271 1321 aaKnown RBP4.11□□□□□ -1.75
CLOCK-201ENST00000309964 MRS2Q9HD23 443 aa4.1□□□□□ -1.75
CLOCK-201ENST00000309964 PHLDB1Q86UU1 1377 aa4.1□□□□□ -1.75
CLOCK-201ENST00000309964 TERF2IPQ9NYB0 399 aa4.1□□□□□ -1.75
CLOCK-201ENST00000309964 PRDM2Q13029 1718 aa4.1□□□□□ -1.75
CLOCK-201ENST00000309964 GOLGA6L6A8MZA4 724 aa4.1□□□□□ -1.75
CLOCK-201ENST00000309964 IPO8O15397 1037 aaKnown RBP4.1□□□□□ -1.75
CLOCK-201ENST00000309964 NGEFQ8N5V2 710 aa4.1□□□□□ -1.75
CLOCK-201ENST00000309964 RAPGEF2Q9Y4G8 1499 aa4.1□□□□□ -1.75
CLOCK-201ENST00000309964 ROCK2O75116 1388 aaKnown RBP4.09□□□□□ -1.75
CLOCK-201ENST00000309964 LMOD3Q0VAK6 560 aa4.09□□□□□ -1.75
CLOCK-201ENST00000309964 LRRFIP1Q32MZ4 808 aaKnown RBP4.09□□□□□ -1.75
CLOCK-201ENST00000309964 MCCP23508 829 aa4.09□□□□□ -1.75
CLOCK-201ENST00000309964 GLIPR1L2Q4G1C9 344 aa4.09□□□□□ -1.76
CLOCK-201ENST00000309964 CUX1P39880 1505 aa4.09□□□□□ -1.76
CLOCK-201ENST00000309964 WIZO95785 1651 aa4.09□□□□□ -1.76
CLOCK-201ENST00000309964 LMOD2Q6P5Q4 547 aa4.08□□□□□ -1.76
CLOCK-201ENST00000309964 VPS8Q8N3P4 1428 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms