RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.54
ATP2A2-201ENST00000308664 SALL2Q9Y467 1007 aaPredicted RBP24.69■■□□□ 1.54
ATP2A2-201ENST00000308664 MRS2Q9HD23 443 aa24.65■■□□□ 1.54
ATP2A2-201ENST00000308664 CANXP27824 592 aaKnown RBP24.55■■□□□ 1.52
ATP2A2-201ENST00000308664 PLEKHD1A6NEE1 506 aa24.52■■□□□ 1.52
ATP2A2-201ENST00000308664 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
ATP2A2-201ENST00000308664 SENP3-EIF4A1A0A087X0R7 540 aa24.49■■□□□ 1.51
ATP2A2-201ENST00000308664 TMC1Q8TDI8 760 aa24.49■■□□□ 1.51
ATP2A2-201ENST00000308664 GOLGA3Q08378 1498 aa24.47■■□□□ 1.51
ATP2A2-201ENST00000308664 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
ATP2A2-201ENST00000308664 KIF27Q86VH2 1401 aa24.47■■□□□ 1.51
ATP2A2-201ENST00000308664 NEFMP07197 916 aa24.47■■□□□ 1.51
ATP2A2-201ENST00000308664 BAZ1AQ9NRL2 1556 aaPredicted RBP24.44■■□□□ 1.5
ATP2A2-201ENST00000308664 SIN3AQ96ST3 1273 aa24.43■■□□□ 1.5
ATP2A2-201ENST00000308664 SOGA1O94964 1423 aa24.43■■□□□ 1.5
ATP2A2-201ENST00000308664 RBM19Q9Y4C8 960 aaKnown RBP24.42■■□□□ 1.5
ATP2A2-201ENST00000308664 TSHZ2Q9NRE2 1034 aa24.4■■□□□ 1.5
ATP2A2-201ENST00000308664 CFDP1Q9UEE9 299 aaPredicted RBP24.39■■□□□ 1.5
ATP2A2-201ENST00000308664 EEA1Q15075 1411 aa24.39■■□□□ 1.5
ATP2A2-201ENST00000308664 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.49
ATP2A2-201ENST00000308664 EIF4G2P78344 907 aaKnown RBP eCLIP24.37■■□□□ 1.49
ATP2A2-201ENST00000308664 PLEKHG5O94827 1062 aa24.36■■□□□ 1.49
ATP2A2-201ENST00000308664 ARXQ96QS3 562 aa24.35■■□□□ 1.49
ATP2A2-201ENST00000308664 ERCC6Q03468 1493 aa24.35■■□□□ 1.49
ATP2A2-201ENST00000308664 B4GALNT3Q6L9W6 998 aa24.29■■□□□ 1.48
ATP2A2-201ENST00000308664 RTN4Q9NQC3 1192 aaKnown RBP24.28■■□□□ 1.48
ATP2A2-201ENST00000308664 PPP4R2Q9NY27 417 aa24.26■■□□□ 1.47
ATP2A2-201ENST00000308664 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
ATP2A2-201ENST00000308664 CUX2O14529 1486 aa24.26■■□□□ 1.47
ATP2A2-201ENST00000308664 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
ATP2A2-201ENST00000308664 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
ATP2A2-201ENST00000308664 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
ATP2A2-201ENST00000308664 ABCC8Q09428 1581 aa24.2■■□□□ 1.46
ATP2A2-201ENST00000308664 NOP58Q9Y2X3 529 aaKnown RBP24.2■■□□□ 1.46
ATP2A2-201ENST00000308664 UPF2Q9HAU5 1272 aaKnown RBP24.18■■□□□ 1.46
ATP2A2-201ENST00000308664 LAS1LQ9Y4W2 734 aaKnown RBP24.17■■□□□ 1.46
ATP2A2-201ENST00000308664 DEKP35659 375 aaKnown RBP24.16■■□□□ 1.46
ATP2A2-201ENST00000308664 ARID4BQ4LE39 1312 aaPredicted RBP24.15■■□□□ 1.46
ATP2A2-201ENST00000308664 HSP90AA1P07900 732 aaKnown RBP24.13■■□□□ 1.45
ATP2A2-201ENST00000308664 KANK4Q5T7N3 995 aaPredicted RBP24.12■■□□□ 1.45
ATP2A2-201ENST00000308664 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
ATP2A2-201ENST00000308664 GLIPR1L2Q4G1C9 344 aa24.09■■□□□ 1.45
ATP2A2-201ENST00000308664 CCNB3Q8WWL7 1395 aa24.07■■□□□ 1.44
ATP2A2-201ENST00000308664 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.07■■□□□ 1.44
ATP2A2-201ENST00000308664 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
ATP2A2-201ENST00000308664 WDR43Q15061 677 aaKnown RBP eCLIP24.06■■□□□ 1.44
ATP2A2-201ENST00000308664 ANP32BQ92688 251 aaKnown RBP24.05■■□□□ 1.44
ATP2A2-201ENST00000308664 CCER2I3L3R5 266 aa24.05■■□□□ 1.44
ATP2A2-201ENST00000308664 ZBTB7CA1YPR0 619 aa24.02■■□□□ 1.44
ATP2A2-201ENST00000308664 C14orf37Q86TY3 774 aa24.02■■□□□ 1.44
ATP2A2-201ENST00000308664 DDRGK1Q96HY6 314 aa24.01■■□□□ 1.43
ATP2A2-201ENST00000308664 CARD11Q9BXL7 1154 aa24■■□□□ 1.43
ATP2A2-201ENST00000308664 PPM1GO15355 546 aaPredicted RBP23.98■■□□□ 1.43
ATP2A2-201ENST00000308664 MLECQ14165 292 aa23.98■■□□□ 1.43
ATP2A2-201ENST00000308664 VPS8Q8N3P4 1428 aa23.96■■□□□ 1.43
ATP2A2-201ENST00000308664 FOXD1Q16676 465 aa23.96■■□□□ 1.43
ATP2A2-201ENST00000308664 WIZO95785 1651 aa23.95■■□□□ 1.42
ATP2A2-201ENST00000308664 A0A0G2JS52 829 aa23.94■■□□□ 1.42
ATP2A2-201ENST00000308664 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
ATP2A2-201ENST00000308664 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
ATP2A2-201ENST00000308664 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
ATP2A2-201ENST00000308664 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
ATP2A2-201ENST00000308664 TNNT2P45379 298 aaPredicted RBP23.86■■□□□ 1.41
ATP2A2-201ENST00000308664 RGS3P49796 1198 aa23.86■■□□□ 1.41
ATP2A2-201ENST00000308664 PDS5BQ9NTI5 1447 aa23.85■■□□□ 1.41
ATP2A2-201ENST00000308664 GGT6Q6P531 493 aa23.85■■□□□ 1.41
ATP2A2-201ENST00000308664 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
ATP2A2-201ENST00000308664 SMARCA2P51531 1590 aa23.83■■□□□ 1.4
ATP2A2-201ENST00000308664 CADPSQ9ULU8 1353 aa23.83■■□□□ 1.4
ATP2A2-201ENST00000308664 BECN1Q14457 450 aa23.82■■□□□ 1.4
ATP2A2-201ENST00000308664 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
ATP2A2-201ENST00000308664 HSPA5P11021 654 aaKnown RBP23.81■■□□□ 1.4
ATP2A2-201ENST00000308664 SETD5Q9C0A6 1442 aa23.8■■□□□ 1.4
ATP2A2-201ENST00000308664 ERICH6BQ5W0A0 696 aa23.8■■□□□ 1.4
ATP2A2-201ENST00000308664 KNSTRNQ9Y448 316 aa23.8■■□□□ 1.4
ATP2A2-201ENST00000308664 SAFB2Q14151 953 aaKnown RBP eCLIP23.78■■□□□ 1.4
ATP2A2-201ENST00000308664 LMOD2Q6P5Q4 547 aa23.76■■□□□ 1.39
ATP2A2-201ENST00000308664 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
ATP2A2-201ENST00000308664 POGKQ9P215 609 aa23.75■■□□□ 1.39
ATP2A2-201ENST00000308664 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
ATP2A2-201ENST00000308664 PKD2Q13563 968 aa23.74■■□□□ 1.39
ATP2A2-201ENST00000308664 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
ATP2A2-201ENST00000308664 CC2D1BQ5T0F9 858 aaKnown RBP23.73■■□□□ 1.39
ATP2A2-201ENST00000308664 TRIM44Q96DX7 344 aaPredicted RBP23.72■■□□□ 1.39
ATP2A2-201ENST00000308664 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.69■■□□□ 1.38
ATP2A2-201ENST00000308664 FHOD3Q2V2M9 1422 aa23.68■■□□□ 1.38
ATP2A2-201ENST00000308664 JPH4Q96JJ6 628 aa23.67■■□□□ 1.38
ATP2A2-201ENST00000308664 SOX12O15370 315 aa23.66■■□□□ 1.38
ATP2A2-201ENST00000308664 NAP1L5Q96NT1 182 aaPredicted RBP23.66■■□□□ 1.38
ATP2A2-201ENST00000308664 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
ATP2A2-201ENST00000308664 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
ATP2A2-201ENST00000308664 HNRNPMP52272 730 aaKnown RBP eCLIP23.64■■□□□ 1.381e-7■■■■□ 25.6
ATP2A2-201ENST00000308664 CDCA8Q53HL2 280 aa23.63■■□□□ 1.37
ATP2A2-201ENST00000308664 IPO9Q96P70 1041 aaKnown RBP23.62■■□□□ 1.37
ATP2A2-201ENST00000308664 STK26Q9P289 416 aa23.62■■□□□ 1.37
ATP2A2-201ENST00000308664 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
ATP2A2-201ENST00000308664 HAP1P54257 671 aaPredicted RBP23.61■■□□□ 1.37
ATP2A2-201ENST00000308664 ARHGAP35Q9NRY4 1499 aa23.59■■□□□ 1.37
ATP2A2-201ENST00000308664 CFAP53Q96M91 514 aa23.59■■□□□ 1.37
ATP2A2-201ENST00000308664 EFCAB2Q5VUJ9 269 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms