RNA–Protein interactions for RNA: ENST00000308370.11

LTBP4-203, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LTBP4, Length 4,948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-203ENST00000308370 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.47
LTBP4-203ENST00000308370 SCAF1Q9H7N4 1312 aaKnown RBP24.2■■□□□ 1.46
LTBP4-203ENST00000308370 CADPSQ9ULU8 1353 aa24.19■■□□□ 1.46
LTBP4-203ENST00000308370 PDS5BQ9NTI5 1447 aa24.18■■□□□ 1.46
LTBP4-203ENST00000308370 VPS8Q8N3P4 1428 aa24.17■■□□□ 1.46
LTBP4-203ENST00000308370 CHGAP10645 457 aaKnown RBP24.17■■□□□ 1.46
LTBP4-203ENST00000308370 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
LTBP4-203ENST00000308370 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.46
LTBP4-203ENST00000308370 ANP32BQ92688 251 aaKnown RBP24.13■■□□□ 1.45
LTBP4-203ENST00000308370 CCNB3Q8WWL7 1395 aa24.1■■□□□ 1.45
LTBP4-203ENST00000308370 ESF1Q9H501 851 aaKnown RBP24.09■■□□□ 1.45
LTBP4-203ENST00000308370 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.45
LTBP4-203ENST00000308370 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
LTBP4-203ENST00000308370 HIRIP3Q9BW71 556 aaPredicted RBP24.06■■□□□ 1.44
LTBP4-203ENST00000308370 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
LTBP4-203ENST00000308370 MIER1Q8N108 512 aa24.05■■□□□ 1.44
LTBP4-203ENST00000308370 STAG3Q9UJ98 1225 aa24.02■■□□□ 1.44
LTBP4-203ENST00000308370 KANK4Q5T7N3 995 aaPredicted RBP24.01■■□□□ 1.43
LTBP4-203ENST00000308370 EIF4G2P78344 907 aaKnown RBP eCLIP24■■□□□ 1.431e-6■■■■□ 19.5
LTBP4-203ENST00000308370 HNRNPUQ00839 825 aaKnown RBP eCLIP24■■□□□ 1.43
LTBP4-203ENST00000308370 FAM9BQ8IZU0 186 aa23.97■■□□□ 1.43
LTBP4-203ENST00000308370 CANXP27824 592 aaKnown RBP23.95■■□□□ 1.42
LTBP4-203ENST00000308370 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
LTBP4-203ENST00000308370 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
LTBP4-203ENST00000308370 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
LTBP4-203ENST00000308370 NEFMP07197 916 aa23.91■■□□□ 1.42
LTBP4-203ENST00000308370 NPM2Q86SE8 214 aaKnown RBP23.91■■□□□ 1.42
LTBP4-203ENST00000308370 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
LTBP4-203ENST00000308370 FMN1Q68DA7 1419 aa23.85■■□□□ 1.41
LTBP4-203ENST00000308370 FKBP8Q14318 412 aa23.85■■□□□ 1.41
LTBP4-203ENST00000308370 MRS2Q9HD23 443 aa23.85■■□□□ 1.41
LTBP4-203ENST00000308370 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
LTBP4-203ENST00000308370 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
LTBP4-203ENST00000308370 ARHGAP35Q9NRY4 1499 aa23.83■■□□□ 1.41
LTBP4-203ENST00000308370 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
LTBP4-203ENST00000308370 SETD5Q9C0A6 1442 aa23.78■■□□□ 1.4
LTBP4-203ENST00000308370 PLPPR3Q6T4P5 718 aa23.77■■□□□ 1.4
LTBP4-203ENST00000308370 CARMIL2Q6F5E8 1435 aa23.77■■□□□ 1.4
LTBP4-203ENST00000308370 HSP90AA1P07900 732 aaKnown RBP23.76■■□□□ 1.39
LTBP4-203ENST00000308370 UPF2Q9HAU5 1272 aaKnown RBP23.75■■□□□ 1.39
LTBP4-203ENST00000308370 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
LTBP4-203ENST00000308370 FHOD3Q2V2M9 1422 aa23.74■■□□□ 1.39
LTBP4-203ENST00000308370 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
LTBP4-203ENST00000308370 BCL11AQ9H165 835 aa23.68■■□□□ 1.38
LTBP4-203ENST00000308370 SLC24A1O60721 1099 aa23.67■■□□□ 1.38
LTBP4-203ENST00000308370 CARD11Q9BXL7 1154 aa23.67■■□□□ 1.38
LTBP4-203ENST00000308370 RAB3GAP2Q9H2M9 1393 aa23.65■■□□□ 1.38
LTBP4-203ENST00000308370 WDR43Q15061 677 aaKnown RBP eCLIP23.64■■□□□ 1.386e-7■■□□□ 12.2
LTBP4-203ENST00000308370 IGF1RP08069 1367 aa23.63■■□□□ 1.37
LTBP4-203ENST00000308370 FGD5Q6ZNL6 1462 aa23.63■■□□□ 1.37
LTBP4-203ENST00000308370 NBR1Q14596 966 aa23.61■■□□□ 1.37
LTBP4-203ENST00000308370 JPH4Q96JJ6 628 aa23.56■■□□□ 1.36
LTBP4-203ENST00000308370 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
LTBP4-203ENST00000308370 CDCA8Q53HL2 280 aa23.52■■□□□ 1.36
LTBP4-203ENST00000308370 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
LTBP4-203ENST00000308370 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.36
LTBP4-203ENST00000308370 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
LTBP4-203ENST00000308370 PKD2Q13563 968 aa23.5■■□□□ 1.35
LTBP4-203ENST00000308370 FOXD1Q16676 465 aa23.49■■□□□ 1.35
LTBP4-203ENST00000308370 TNNT2P45379 298 aaPredicted RBP23.48■■□□□ 1.35
LTBP4-203ENST00000308370 MPHOSPH9Q99550 1183 aa23.48■■□□□ 1.35
LTBP4-203ENST00000308370 CFTRP13569 1480 aa23.48■■□□□ 1.35
LTBP4-203ENST00000308370 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
LTBP4-203ENST00000308370 CCDC136Q96JN2 1154 aa23.47■■□□□ 1.35
LTBP4-203ENST00000308370 KNSTRNQ9Y448 316 aa23.45■■□□□ 1.34
LTBP4-203ENST00000308370 EFCAB2Q5VUJ9 269 aa23.44■■□□□ 1.34
LTBP4-203ENST00000308370 CCDC18Q5T9S5 1454 aa23.44■■□□□ 1.34
LTBP4-203ENST00000308370 IRX6P78412 446 aaPredicted RBP23.44■■□□□ 1.34
LTBP4-203ENST00000308370 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
LTBP4-203ENST00000308370 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
LTBP4-203ENST00000308370 ARID4BQ4LE39 1312 aaPredicted RBP23.42■■□□□ 1.34
LTBP4-203ENST00000308370 KANK1Q14678 1352 aa23.41■■□□□ 1.34
LTBP4-203ENST00000308370 ANP32EQ9BTT0 268 aa23.41■■□□□ 1.34
LTBP4-203ENST00000308370 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
LTBP4-203ENST00000308370 NUP155O75694 1391 aa23.39■■□□□ 1.34
LTBP4-203ENST00000308370 HSPA5P11021 654 aaKnown RBP23.38■■□□□ 1.33
LTBP4-203ENST00000308370 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
LTBP4-203ENST00000308370 ARXQ96QS3 562 aa23.37■■□□□ 1.33
LTBP4-203ENST00000308370 HNRNPMP52272 730 aaKnown RBP eCLIP23.35■■□□□ 1.33
LTBP4-203ENST00000308370 TRIM44Q96DX7 344 aaPredicted RBP23.35■■□□□ 1.33
LTBP4-203ENST00000308370 SENP3-EIF4A1A0A087X0R7 540 aa23.33■■□□□ 1.33
LTBP4-203ENST00000308370 KIF21BO75037 1637 aa23.33■■□□□ 1.33
LTBP4-203ENST00000308370 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
LTBP4-203ENST00000308370 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
LTBP4-203ENST00000308370 RSPH4AQ5TD94 716 aa23.31■■□□□ 1.32
LTBP4-203ENST00000308370 ERICH6BQ5W0A0 696 aa23.3■■□□□ 1.32
LTBP4-203ENST00000308370 TMF1P82094 1093 aa23.3■■□□□ 1.32
LTBP4-203ENST00000308370 GGT6Q6P531 493 aa23.29■■□□□ 1.32
LTBP4-203ENST00000308370 AQRO60306 1485 aaKnown RBP eCLIP23.28■■□□□ 1.323e-7■■■■□ 26.3
LTBP4-203ENST00000308370 CFAP53Q96M91 514 aa23.28■■□□□ 1.32
LTBP4-203ENST00000308370 NESP48681 1621 aa23.27■■□□□ 1.32
LTBP4-203ENST00000308370 PTPRGP23470 1445 aa23.27■■□□□ 1.32
LTBP4-203ENST00000308370 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
LTBP4-203ENST00000308370 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
LTBP4-203ENST00000308370 CCER2I3L3R5 266 aa23.26■■□□□ 1.31
LTBP4-203ENST00000308370 SUPT16HQ9Y5B9 1047 aaKnown RBP23.26■■□□□ 1.31
LTBP4-203ENST00000308370 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
LTBP4-203ENST00000308370 POGKQ9P215 609 aa23.25■■□□□ 1.31
LTBP4-203ENST00000308370 DDRGK1Q96HY6 314 aa23.25■■□□□ 1.31
LTBP4-203ENST00000308370 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms