RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 FGD5Q6ZNL6 1462 aa8.26□□□□□ -1.09
VPS50-202ENST00000305866 POLR1AO95602 1720 aaPredicted RBP8.25□□□□□ -1.09
VPS50-202ENST00000305866 EHMT2Q96KQ7 1210 aa8.24□□□□□ -1.09
VPS50-202ENST00000305866 TOPBP1Q92547 1522 aa8.24□□□□□ -1.09
VPS50-202ENST00000305866 TARBP1Q13395 1621 aaKnown RBP8.23□□□□□ -1.09
VPS50-202ENST00000305866 PCF11O94913 1555 aaKnown RBP8.23□□□□□ -1.09
VPS50-202ENST00000305866 ARHGEF11O15085 1522 aa8.22□□□□□ -1.09
VPS50-202ENST00000305866 FANCD2Q9BXW9 1451 aa8.22□□□□□ -1.09
VPS50-202ENST00000305866 FYCO1Q9BQS8 1478 aa8.22□□□□□ -1.09
VPS50-202ENST00000305866 DENND4BO75064 1496 aaPredicted RBP8.21□□□□□ -1.09
VPS50-202ENST00000305866 POLA1P09884 1462 aaPredicted RBP8.21□□□□□ -1.1
VPS50-202ENST00000305866 KANK4Q5T7N3 995 aaPredicted RBP8.2□□□□□ -1.1
VPS50-202ENST00000305866 SNAPC4Q5SXM2 1469 aa8.2□□□□□ -1.1
VPS50-202ENST00000305866 LRRC9Q6ZRR7 1453 aa8.18□□□□□ -1.1
VPS50-202ENST00000305866 URB2Q14146 1524 aaKnown RBP8.18□□□□□ -1.1
VPS50-202ENST00000305866 CASKIN1Q8WXD9 1431 aa8.17□□□□□ -1.1
VPS50-202ENST00000305866 GCC2Q8IWJ2 1684 aa8.17□□□□□ -1.1
VPS50-202ENST00000305866 FHAD1B1AJZ9 1412 aa8.16□□□□□ -1.1
VPS50-202ENST00000305866 PBRM1Q86U86 1689 aa8.16□□□□□ -1.1
VPS50-202ENST00000305866 SUPT16HQ9Y5B9 1047 aaKnown RBP8.16□□□□□ -1.1
VPS50-202ENST00000305866 CENPBP07199 599 aaPredicted RBP8.15□□□□□ -1.1
VPS50-202ENST00000305866 CARMIL1Q5VZK9 1371 aa8.14□□□□□ -1.11
VPS50-202ENST00000305866 GRIN2BQ13224 1484 aa8.14□□□□□ -1.11
VPS50-202ENST00000305866 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
VPS50-202ENST00000305866 PHLDB1Q86UU1 1377 aa8.12□□□□□ -1.11
VPS50-202ENST00000305866 TCOF1Q13428 1488 aaKnown RBP8.12□□□□□ -1.11
VPS50-202ENST00000305866 HECW1Q76N89 1606 aa8.12□□□□□ -1.11
VPS50-202ENST00000305866 PTPN23Q9H3S7 1636 aa8.12□□□□□ -1.11
VPS50-202ENST00000305866 ADAMTS12P58397 1594 aa8.11□□□□□ -1.11
VPS50-202ENST00000305866 TSHZ2Q9NRE2 1034 aa8.11□□□□□ -1.11
VPS50-202ENST00000305866 KDM6BO15054 1643 aa8.11□□□□□ -1.11
VPS50-202ENST00000305866 CCNB3Q8WWL7 1395 aa8.11□□□□□ -1.11
VPS50-202ENST00000305866 WDR62O43379 1518 aa8.11□□□□□ -1.11
VPS50-202ENST00000305866 AKNAQ7Z591 1439 aa8.1□□□□□ -1.11
VPS50-202ENST00000305866 MAGI3Q5TCQ9 1506 aa8.1□□□□□ -1.11
VPS50-202ENST00000305866 UGGT2Q9NYU1 1516 aa8.1□□□□□ -1.11
VPS50-202ENST00000305866 MYT1Q01538 1121 aa8.1□□□□□ -1.11
VPS50-202ENST00000305866 RAB3GAP2Q9H2M9 1393 aa8.09□□□□□ -1.11
VPS50-202ENST00000305866 PPP1R15AO75807 674 aaPredicted RBP8.09□□□□□ -1.11
VPS50-202ENST00000305866 KCNH8Q96L42 1107 aa8.09□□□□□ -1.11
VPS50-202ENST00000305866 PTPRKQ15262 1439 aa8.09□□□□□ -1.11
VPS50-202ENST00000305866 EHBP1L1Q8N3D4 1523 aa8.08□□□□□ -1.12
VPS50-202ENST00000305866 FMN1Q68DA7 1419 aa8.07□□□□□ -1.12
VPS50-202ENST00000305866 PDS5BQ9NTI5 1447 aa8.06□□□□□ -1.12
VPS50-202ENST00000305866 ADCY10Q96PN6 1610 aa8.06□□□□□ -1.12
VPS50-202ENST00000305866 RAD54L2Q9Y4B4 1467 aa8.06□□□□□ -1.12
VPS50-202ENST00000305866 NCOA2Q15596 1464 aa8.06□□□□□ -1.12
VPS50-202ENST00000305866 CCDC18Q5T9S5 1454 aa8.06□□□□□ -1.12
VPS50-202ENST00000305866 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
VPS50-202ENST00000305866 HNRNPUL2Q1KMD3 747 aaKnown RBP8.05□□□□□ -1.12
VPS50-202ENST00000305866 TTBK1Q5TCY1 1321 aaPredicted RBP8.05□□□□□ -1.12
VPS50-202ENST00000305866 TIMELESSQ9UNS1 1208 aa8.05□□□□□ -1.12
VPS50-202ENST00000305866 NESP48681 1621 aa8.05□□□□□ -1.12
VPS50-202ENST00000305866 GAPVD1Q14C86 1478 aa8.04□□□□□ -1.12
VPS50-202ENST00000305866 SETD5Q9C0A6 1442 aa8.03□□□□□ -1.12
VPS50-202ENST00000305866 HFM1A2PYH4 1435 aa8.02□□□□□ -1.13
VPS50-202ENST00000305866 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.13
VPS50-202ENST00000305866 E9PCH4 1651 aa8.02□□□□□ -1.13
VPS50-202ENST00000305866 IQGAP2Q13576 1575 aa8.02□□□□□ -1.13
VPS50-202ENST00000305866 CROCC2H7BZ55 1655 aa8.01□□□□□ -1.13
VPS50-202ENST00000305866 FGD6Q6ZV73 1430 aa8□□□□□ -1.13
VPS50-202ENST00000305866 IFT140Q96RY7 1462 aa7.99□□□□□ -1.13
VPS50-202ENST00000305866 KIAA0556O60303 1618 aa7.99□□□□□ -1.13
VPS50-202ENST00000305866 BCORL1Q5H9F3 1711 aa7.99□□□□□ -1.13
VPS50-202ENST00000305866 YTHDC1Q96MU7 727 aaKnown RBP7.98□□□□□ -1.13
VPS50-202ENST00000305866 MIA2Q96PC5 1412 aa7.98□□□□□ -1.13
VPS50-202ENST00000305866 NAIPQ13075 1403 aa7.97□□□□□ -1.13
VPS50-202ENST00000305866 MYOM3Q5VTT5 1437 aa7.97□□□□□ -1.13
VPS50-202ENST00000305866 MBD5Q9P267 1494 aa7.97□□□□□ -1.13
VPS50-202ENST00000305866 DNMT1P26358 1616 aaKnown RBP7.96□□□□□ -1.13
VPS50-202ENST00000305866 DISP1Q96F81 1524 aa7.96□□□□□ -1.14
VPS50-202ENST00000305866 UACAQ9BZF9 1416 aa7.96□□□□□ -1.14
VPS50-202ENST00000305866 MSH5O43196 834 aa7.95□□□□□ -1.14
VPS50-202ENST00000305866 FHOD3Q2V2M9 1422 aa7.95□□□□□ -1.14
VPS50-202ENST00000305866 SPATA31E1Q6ZUB1 1445 aa7.95□□□□□ -1.14
VPS50-202ENST00000305866 TEX14Q8IWB6 1497 aa7.95□□□□□ -1.14
VPS50-202ENST00000305866 KIAA0586Q9BVV6 1533 aa7.95□□□□□ -1.14
VPS50-202ENST00000305866 ADGBQ8N7X0 1667 aa7.94□□□□□ -1.14
VPS50-202ENST00000305866 EIF4G3O43432 1585 aaKnown RBP7.94□□□□□ -1.14
VPS50-202ENST00000305866 EPRSP07814 1512 aaKnown RBP7.94□□□□□ -1.14
VPS50-202ENST00000305866 ROCK1Q13464 1354 aa7.94□□□□□ -1.14
VPS50-202ENST00000305866 MAGI1Q96QZ7 1491 aaPredicted RBP7.93□□□□□ -1.14
VPS50-202ENST00000305866 APLP2Q06481 763 aa7.93□□□□□ -1.14
VPS50-202ENST00000305866 RAPGEF6Q8TEU7 1601 aa7.93□□□□□ -1.14
VPS50-202ENST00000305866 ANP32EQ9BTT0 268 aa7.93□□□□□ -1.14
VPS50-202ENST00000305866 ITSN2Q9NZM3 1697 aa7.92□□□□□ -1.14
VPS50-202ENST00000305866 ADGRL2O95490 1459 aa7.92□□□□□ -1.14
VPS50-202ENST00000305866 KDM5DQ9BY66 1539 aa7.91□□□□□ -1.14
VPS50-202ENST00000305866 NUP160Q12769 1436 aa7.91□□□□□ -1.14
VPS50-202ENST00000305866 CCER2I3L3R5 266 aa7.9□□□□□ -1.14
VPS50-202ENST00000305866 KDM5CP41229 1560 aa7.9□□□□□ -1.15
VPS50-202ENST00000305866 SHROOM2Q13796 1616 aa7.9□□□□□ -1.15
VPS50-202ENST00000305866 ABCA8O94911 1581 aa7.9□□□□□ -1.15
VPS50-202ENST00000305866 CEP170Q5SW79 1584 aa7.89□□□□□ -1.15
VPS50-202ENST00000305866 CDC42BPAQ5VT25 1732 aa7.89□□□□□ -1.15
VPS50-202ENST00000305866 GRIN2AQ12879 1464 aa7.89□□□□□ -1.15
VPS50-202ENST00000305866 SIN3AQ96ST3 1273 aa7.89□□□□□ -1.15
VPS50-202ENST00000305866 NCOA1Q15788 1441 aa7.88□□□□□ -1.15
VPS50-202ENST00000305866 NUP153P49790 1475 aaKnown RBP7.88□□□□□ -1.15
VPS50-202ENST00000305866 SHANK2Q9UPX8 1470 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms