RNA–Protein interactions for RNA: ENST00000303759.3

CHCHD7-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene CHCHD7, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD7-201ENST00000303759 CUL7Q14999 1698 aa18.42■□□□□ 0.54
CHCHD7-201ENST00000303759 EFCAB5A4FU69 1503 aa18.41■□□□□ 0.54
CHCHD7-201ENST00000303759 AEBP2Q6ZN18 517 aaPredicted RBP18.41■□□□□ 0.54
CHCHD7-201ENST00000303759 PCF11O94913 1555 aaKnown RBP18.39■□□□□ 0.54
CHCHD7-201ENST00000303759 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
CHCHD7-201ENST00000303759 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHCHD7-201ENST00000303759 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
CHCHD7-201ENST00000303759 MAPKBP1O60336 1514 aa18.37■□□□□ 0.53
CHCHD7-201ENST00000303759 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
CHCHD7-201ENST00000303759 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
CHCHD7-201ENST00000303759 SETD5Q9C0A6 1442 aa18.35■□□□□ 0.53
CHCHD7-201ENST00000303759 FYCO1Q9BQS8 1478 aa18.35■□□□□ 0.53
CHCHD7-201ENST00000303759 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
CHCHD7-201ENST00000303759 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
CHCHD7-201ENST00000303759 PHLDB1Q86UU1 1377 aa18.34■□□□□ 0.53
CHCHD7-201ENST00000303759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHCHD7-201ENST00000303759 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
CHCHD7-201ENST00000303759 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
CHCHD7-201ENST00000303759 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
CHCHD7-201ENST00000303759 FHOD3Q2V2M9 1422 aa18.25■□□□□ 0.51
CHCHD7-201ENST00000303759 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
CHCHD7-201ENST00000303759 ITGAEP38570 1179 aa18.24■□□□□ 0.51
CHCHD7-201ENST00000303759 NESP48681 1621 aa18.23■□□□□ 0.51
CHCHD7-201ENST00000303759 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
CHCHD7-201ENST00000303759 SAMD9Q5K651 1589 aa18.23■□□□□ 0.51
CHCHD7-201ENST00000303759 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
CHCHD7-201ENST00000303759 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
CHCHD7-201ENST00000303759 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
CHCHD7-201ENST00000303759 THOC2Q8NI27 1593 aaKnown RBP18.18■□□□□ 0.5
CHCHD7-201ENST00000303759 P3H3Q8IVL6 736 aa18.16■□□□□ 0.5
CHCHD7-201ENST00000303759 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
CHCHD7-201ENST00000303759 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
CHCHD7-201ENST00000303759 LRRIQ1Q96JM4 1722 aa18.14■□□□□ 0.5
CHCHD7-201ENST00000303759 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.5
CHCHD7-201ENST00000303759 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
CHCHD7-201ENST00000303759 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
CHCHD7-201ENST00000303759 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
CHCHD7-201ENST00000303759 SUPT6HQ7KZ85 1726 aaKnown RBP18.07■□□□□ 0.48
CHCHD7-201ENST00000303759 SIN3AQ96ST3 1273 aa18.06■□□□□ 0.48
CHCHD7-201ENST00000303759 ATP1B4Q9UN42 357 aaPredicted RBP18.06■□□□□ 0.48
CHCHD7-201ENST00000303759 HFM1A2PYH4 1435 aa18.06■□□□□ 0.48
CHCHD7-201ENST00000303759 EHBP1L1Q8N3D4 1523 aa18.06■□□□□ 0.48
CHCHD7-201ENST00000303759 TARBP1Q13395 1621 aaKnown RBP18.06■□□□□ 0.48
CHCHD7-201ENST00000303759 PTPN23Q9H3S7 1636 aa18.05■□□□□ 0.48
CHCHD7-201ENST00000303759 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
CHCHD7-201ENST00000303759 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
CHCHD7-201ENST00000303759 TDRD9Q8NDG6 1382 aaKnown RBP18.04■□□□□ 0.48
CHCHD7-201ENST00000303759 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
CHCHD7-201ENST00000303759 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
CHCHD7-201ENST00000303759 MYOM3Q5VTT5 1437 aa18.03■□□□□ 0.48
CHCHD7-201ENST00000303759 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
CHCHD7-201ENST00000303759 UACAQ9BZF9 1416 aa18.03■□□□□ 0.48
CHCHD7-201ENST00000303759 UGGT2Q9NYU1 1516 aa18.01■□□□□ 0.47
CHCHD7-201ENST00000303759 PTPRKQ15262 1439 aa18.01■□□□□ 0.47
CHCHD7-201ENST00000303759 PBRM1Q86U86 1689 aa18■□□□□ 0.47
CHCHD7-201ENST00000303759 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
CHCHD7-201ENST00000303759 NAIPQ13075 1403 aa17.97■□□□□ 0.47
CHCHD7-201ENST00000303759 SUPT16HQ9Y5B9 1047 aaKnown RBP17.96■□□□□ 0.47
CHCHD7-201ENST00000303759 HECW1Q76N89 1606 aa17.96■□□□□ 0.47
CHCHD7-201ENST00000303759 GCC2Q8IWJ2 1684 aa17.95■□□□□ 0.46
CHCHD7-201ENST00000303759 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
CHCHD7-201ENST00000303759 MYT1Q01538 1121 aa17.93■□□□□ 0.46
CHCHD7-201ENST00000303759 AKNAQ7Z591 1439 aa17.93■□□□□ 0.46
CHCHD7-201ENST00000303759 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
CHCHD7-201ENST00000303759 IQGAP2Q13576 1575 aa17.91■□□□□ 0.46
CHCHD7-201ENST00000303759 CCER2I3L3R5 266 aa17.91■□□□□ 0.46
CHCHD7-201ENST00000303759 DDX10Q13206 875 aaKnown RBP17.91■□□□□ 0.46
CHCHD7-201ENST00000303759 TONSLQ96HA7 1378 aa17.91■□□□□ 0.46
CHCHD7-201ENST00000303759 KDM5BQ9UGL1 1544 aa17.9■□□□□ 0.46
CHCHD7-201ENST00000303759 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
CHCHD7-201ENST00000303759 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
CHCHD7-201ENST00000303759 WDR62O43379 1518 aa17.86■□□□□ 0.45
CHCHD7-201ENST00000303759 EPRSP07814 1512 aaKnown RBP17.86■□□□□ 0.45
CHCHD7-201ENST00000303759 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.45
CHCHD7-201ENST00000303759 DENND4BO75064 1496 aaPredicted RBP17.8■□□□□ 0.44
CHCHD7-201ENST00000303759 ANP32CO43423 234 aa17.79■□□□□ 0.44
CHCHD7-201ENST00000303759 DNAJC5BQ9UF47 199 aa17.78■□□□□ 0.44
CHCHD7-201ENST00000303759 CDK13Q14004 1512 aaKnown RBP17.76■□□□□ 0.43
CHCHD7-201ENST00000303759 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
CHCHD7-201ENST00000303759 KDM6BO15054 1643 aa17.76■□□□□ 0.43
CHCHD7-201ENST00000303759 KIAA0556O60303 1618 aa17.74■□□□□ 0.43
CHCHD7-201ENST00000303759 ROCK1Q13464 1354 aa17.74■□□□□ 0.43
CHCHD7-201ENST00000303759 KIAA0586Q9BVV6 1533 aa17.74■□□□□ 0.43
CHCHD7-201ENST00000303759 HIRIP3Q9BW71 556 aaPredicted RBP17.73■□□□□ 0.43
CHCHD7-201ENST00000303759 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
CHCHD7-201ENST00000303759 RRP7BPQ9NSQ0 103 aa17.71■□□□□ 0.42
CHCHD7-201ENST00000303759 DISP1Q96F81 1524 aa17.7■□□□□ 0.42
CHCHD7-201ENST00000303759 RAPGEF6Q8TEU7 1601 aa17.69■□□□□ 0.42
CHCHD7-201ENST00000303759 TSHZ2Q9NRE2 1034 aa17.67■□□□□ 0.42
CHCHD7-201ENST00000303759 DAPK1P53355 1430 aa17.67■□□□□ 0.42
CHCHD7-201ENST00000303759 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
CHCHD7-201ENST00000303759 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
CHCHD7-201ENST00000303759 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
CHCHD7-201ENST00000303759 NUP153P49790 1475 aaKnown RBP17.65■□□□□ 0.42
CHCHD7-201ENST00000303759 ABCC5O15440 1437 aa17.64■□□□□ 0.41
CHCHD7-201ENST00000303759 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
CHCHD7-201ENST00000303759 HSPA5P11021 654 aaKnown RBP17.63■□□□□ 0.41
CHCHD7-201ENST00000303759 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
CHCHD7-201ENST00000303759 RPRD2Q5VT52 1461 aaKnown RBP17.63■□□□□ 0.41
CHCHD7-201ENST00000303759 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms