RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
HIPK3-201ENST00000303296 GOLGA6L22H0YM25 854 aa18.85■□□□□ 0.61
HIPK3-201ENST00000303296 TMC1Q8TDI8 760 aa18.85■□□□□ 0.61
HIPK3-201ENST00000303296 NAP1L2Q9ULW6 460 aaPredicted RBP18.83■□□□□ 0.61
HIPK3-201ENST00000303296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.611e-6■□□□□ 11.1
HIPK3-201ENST00000303296 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
HIPK3-201ENST00000303296 BECN1Q14457 450 aa18.79■□□□□ 0.6
HIPK3-201ENST00000303296 ISY1Q9ULR0 285 aaKnown RBP18.77■□□□□ 0.6
HIPK3-201ENST00000303296 PDE4CQ08493 712 aa18.75■□□□□ 0.59
HIPK3-201ENST00000303296 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
HIPK3-201ENST00000303296 KDM2AQ9Y2K7 1162 aa18.72■□□□□ 0.59
HIPK3-201ENST00000303296 GOLGA6L6A8MZA4 724 aa18.71■□□□□ 0.59
HIPK3-201ENST00000303296 ERICH6BQ5W0A0 696 aa18.71■□□□□ 0.59
HIPK3-201ENST00000303296 CASC1Q6TDU7 716 aa18.71■□□□□ 0.59
HIPK3-201ENST00000303296 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.58
HIPK3-201ENST00000303296 FGD1P98174 961 aa18.7■□□□□ 0.58
HIPK3-201ENST00000303296 FBXO3Q9UK99 471 aa18.7■□□□□ 0.58
HIPK3-201ENST00000303296 ANO8Q9HCE9 1232 aaPredicted RBP18.69■□□□□ 0.58
HIPK3-201ENST00000303296 GOLGA2Q08379 1002 aa18.69■□□□□ 0.58
HIPK3-201ENST00000303296 SENP3-EIF4A1A0A087X0R7 540 aa18.68■□□□□ 0.58
HIPK3-201ENST00000303296 ARID4BQ4LE39 1312 aaPredicted RBP18.67■□□□□ 0.58
HIPK3-201ENST00000303296 NOC3LQ8WTT2 800 aaKnown RBP18.67■□□□□ 0.58
HIPK3-201ENST00000303296 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
HIPK3-201ENST00000303296 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
HIPK3-201ENST00000303296 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
HIPK3-201ENST00000303296 TONSLQ96HA7 1378 aa18.63■□□□□ 0.57
HIPK3-201ENST00000303296 NPM1P06748 294 aaKnown RBP eCLIP18.62■□□□□ 0.57
HIPK3-201ENST00000303296 ANP32EQ9BTT0 268 aa18.62■□□□□ 0.57
HIPK3-201ENST00000303296 ARID3AQ99856 593 aa18.62■□□□□ 0.57
HIPK3-201ENST00000303296 LMOD2Q6P5Q4 547 aa18.61■□□□□ 0.57
HIPK3-201ENST00000303296 DRC7Q8IY82 874 aa18.6■□□□□ 0.57
HIPK3-201ENST00000303296 KCNJ4P48050 445 aa18.59■□□□□ 0.57
HIPK3-201ENST00000303296 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
HIPK3-201ENST00000303296 OS9Q13438 667 aaPredicted RBP18.58■□□□□ 0.56
HIPK3-201ENST00000303296 NRDCO43847 1150 aa18.57■□□□□ 0.56
HIPK3-201ENST00000303296 PPP1R15AO75807 674 aaPredicted RBP18.55■□□□□ 0.56
HIPK3-201ENST00000303296 KRI1Q8N9T8 703 aaKnown RBP18.55■□□□□ 0.56
HIPK3-201ENST00000303296 CHAF1AQ13111 956 aaPredicted RBP18.54■□□□□ 0.56
HIPK3-201ENST00000303296 FTSJ3Q8IY81 847 aaKnown RBP18.54■□□□□ 0.56
HIPK3-201ENST00000303296 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
HIPK3-201ENST00000303296 KIAA2012Q0VF49 1180 aa18.54■□□□□ 0.56
HIPK3-201ENST00000303296 A0A0U1RQG5 324 aaPredicted RBP18.52■□□□□ 0.56
HIPK3-201ENST00000303296 HSP90AB1P08238 724 aaKnown RBP18.52■□□□□ 0.56
HIPK3-201ENST00000303296 GOLGA6L4A6NEF3 574 aa18.51■□□□□ 0.55
HIPK3-201ENST00000303296 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
HIPK3-201ENST00000303296 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
HIPK3-201ENST00000303296 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
HIPK3-201ENST00000303296 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
HIPK3-201ENST00000303296 GNL2Q13823 731 aaKnown RBP18.45■□□□□ 0.54
HIPK3-201ENST00000303296 TNNT3P45378 269 aaPredicted RBP18.44■□□□□ 0.54
HIPK3-201ENST00000303296 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
HIPK3-201ENST00000303296 MSNP26038 577 aaKnown RBP18.42■□□□□ 0.54
HIPK3-201ENST00000303296 SPRYD3Q8NCJ5 442 aa18.42■□□□□ 0.54
HIPK3-201ENST00000303296 WWC1Q8IX03 1113 aa18.39■□□□□ 0.53
HIPK3-201ENST00000303296 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.39■□□□□ 0.53
HIPK3-201ENST00000303296 RGS3P49796 1198 aa18.37■□□□□ 0.53
HIPK3-201ENST00000303296 PATL2C9JE40 543 aaKnown RBP18.33■□□□□ 0.53
HIPK3-201ENST00000303296 CREBRFQ8IUR6 639 aa18.33■□□□□ 0.53
HIPK3-201ENST00000303296 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.52
HIPK3-201ENST00000303296 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
HIPK3-201ENST00000303296 SOX12O15370 315 aa18.28■□□□□ 0.52
HIPK3-201ENST00000303296 GOLGA6L1Q8N7Z2 621 aa18.26■□□□□ 0.51
HIPK3-201ENST00000303296 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
HIPK3-201ENST00000303296 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
HIPK3-201ENST00000303296 CALRP27797 417 aaKnown RBP18.23■□□□□ 0.51
HIPK3-201ENST00000303296 ZNF330Q9Y3S2 320 aaPredicted RBP18.23■□□□□ 0.51
HIPK3-201ENST00000303296 CEP89Q96ST8 783 aa18.22■□□□□ 0.51
HIPK3-201ENST00000303296 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
HIPK3-201ENST00000303296 VPS53Q5VIR6 699 aa18.21■□□□□ 0.5
HIPK3-201ENST00000303296 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
HIPK3-201ENST00000303296 APBB1O00213 710 aa18.19■□□□□ 0.5
HIPK3-201ENST00000303296 TSPY4P0CV99 314 aa18.19■□□□□ 0.5
HIPK3-201ENST00000303296 TSPY10P0CW01 314 aa18.19■□□□□ 0.5
HIPK3-201ENST00000303296 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
HIPK3-201ENST00000303296 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
HIPK3-201ENST00000303296 TMX4Q9H1E5 349 aaPredicted RBP18.17■□□□□ 0.5
HIPK3-201ENST00000303296 MCCP23508 829 aa18.17■□□□□ 0.5
HIPK3-201ENST00000303296 G3V3G9 751 aa18.15■□□□□ 0.5
HIPK3-201ENST00000303296 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
HIPK3-201ENST00000303296 RASSF8Q8NHQ8 419 aa18.15■□□□□ 0.5
HIPK3-201ENST00000303296 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
HIPK3-201ENST00000303296 KCNH8Q96L42 1107 aa18.14■□□□□ 0.49
HIPK3-201ENST00000303296 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
HIPK3-201ENST00000303296 GZF1Q9H116 711 aaPredicted RBP18.13■□□□□ 0.49
HIPK3-201ENST00000303296 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
HIPK3-201ENST00000303296 POGKQ9P215 609 aa18.11■□□□□ 0.49
HIPK3-201ENST00000303296 PES1O00541 588 aaKnown RBP18.1■□□□□ 0.49
HIPK3-201ENST00000303296 SETQ01105 290 aaPredicted RBP18.09■□□□□ 0.49
HIPK3-201ENST00000303296 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
HIPK3-201ENST00000303296 KIAA1211Q6ZU35 1233 aa18.08■□□□□ 0.49
HIPK3-201ENST00000303296 TPM4P67936 248 aa18.08■□□□□ 0.48
HIPK3-201ENST00000303296 NUDCQ9Y266 331 aa18.07■□□□□ 0.48
HIPK3-201ENST00000303296 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
HIPK3-201ENST00000303296 CHMP3Q9Y3E7 222 aa18.06■□□□□ 0.48
HIPK3-201ENST00000303296 MARCH6O60337 910 aa18.05■□□□□ 0.48
HIPK3-201ENST00000303296 CC2D1BQ5T0F9 858 aaKnown RBP18.04■□□□□ 0.48
HIPK3-201ENST00000303296 PTMSP20962 102 aa18.04■□□□□ 0.48
HIPK3-201ENST00000303296 CCDC9Q9Y3X0 531 aaKnown RBP18.04■□□□□ 0.48
HIPK3-201ENST00000303296 RRP7BPQ9NSQ0 103 aa18.03■□□□□ 0.48
HIPK3-201ENST00000303296 MIER1Q8N108 512 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms