RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 RUSC2Q8N2Y8 1516 aa10.57□□□□□ -0.72
LRRC28-201ENST00000301981 CCDC136Q96JN2 1154 aa10.57□□□□□ -0.72
LRRC28-201ENST00000301981 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
LRRC28-201ENST00000301981 FOXD1Q16676 465 aa10.55□□□□□ -0.72
LRRC28-201ENST00000301981 MROH2BQ7Z745 1585 aa10.55□□□□□ -0.72
LRRC28-201ENST00000301981 TNIKQ9UKE5 1360 aa10.54□□□□□ -0.72
LRRC28-201ENST00000301981 GOLGA3Q08378 1498 aa10.54□□□□□ -0.72
LRRC28-201ENST00000301981 LAS1LQ9Y4W2 734 aaKnown RBP10.53□□□□□ -0.72
LRRC28-201ENST00000301981 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
LRRC28-201ENST00000301981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.51□□□□□ -0.73
LRRC28-201ENST00000301981 WRNQ14191 1432 aaPredicted RBP eCLIP10.51□□□□□ -0.73
LRRC28-201ENST00000301981 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
LRRC28-201ENST00000301981 WIZO95785 1651 aa10.49□□□□□ -0.73
LRRC28-201ENST00000301981 CANXP27824 592 aaKnown RBP10.49□□□□□ -0.73
LRRC28-201ENST00000301981 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
LRRC28-201ENST00000301981 PRKCSHP14314 528 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-201ENST00000301981 RGL3Q3MIN7 710 aa10.44□□□□□ -0.74
LRRC28-201ENST00000301981 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
LRRC28-201ENST00000301981 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
LRRC28-201ENST00000301981 DEKP35659 375 aaKnown RBP10.4□□□□□ -0.75
LRRC28-201ENST00000301981 CHGAP10645 457 aaKnown RBP10.39□□□□□ -0.75
LRRC28-201ENST00000301981 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.39□□□□□ -0.75
LRRC28-201ENST00000301981 CCNB3Q8WWL7 1395 aa10.38□□□□□ -0.75
LRRC28-201ENST00000301981 CEP164Q9UPV0 1460 aa10.38□□□□□ -0.75
LRRC28-201ENST00000301981 RAB3GAP2Q9H2M9 1393 aa10.38□□□□□ -0.75
LRRC28-201ENST00000301981 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
LRRC28-201ENST00000301981 HSPA5P11021 654 aaKnown RBP10.37□□□□□ -0.75
LRRC28-201ENST00000301981 CC2D1BQ5T0F9 858 aaKnown RBP10.36□□□□□ -0.75
LRRC28-201ENST00000301981 RAPGEF2Q9Y4G8 1499 aa10.35□□□□□ -0.75
LRRC28-201ENST00000301981 RGS3P49796 1198 aa10.34□□□□□ -0.75
LRRC28-201ENST00000301981 DHX57Q6P158 1386 aaKnown RBP10.34□□□□□ -0.75
LRRC28-201ENST00000301981 NOP58Q9Y2X3 529 aaKnown RBP10.34□□□□□ -0.75
LRRC28-201ENST00000301981 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
LRRC28-201ENST00000301981 NEFMP07197 916 aa10.33□□□□□ -0.76
LRRC28-201ENST00000301981 NEUROD2Q15784 382 aa10.33□□□□□ -0.76
LRRC28-201ENST00000301981 PPP4R2Q9NY27 417 aa10.33□□□□□ -0.76
LRRC28-201ENST00000301981 TNNT2P45379 298 aaPredicted RBP10.31□□□□□ -0.76
LRRC28-201ENST00000301981 SPRYD3Q8NCJ5 442 aa10.31□□□□□ -0.76
LRRC28-201ENST00000301981 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
LRRC28-201ENST00000301981 EEA1Q15075 1411 aa10.29□□□□□ -0.76
LRRC28-201ENST00000301981 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
LRRC28-201ENST00000301981 CARD11Q9BXL7 1154 aa10.28□□□□□ -0.76
LRRC28-201ENST00000301981 SETD5Q9C0A6 1442 aa10.27□□□□□ -0.77
LRRC28-201ENST00000301981 ARID4BQ4LE39 1312 aaPredicted RBP10.27□□□□□ -0.77
LRRC28-201ENST00000301981 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
LRRC28-201ENST00000301981 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
LRRC28-201ENST00000301981 PPP1R15AO75807 674 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-201ENST00000301981 KIF27Q86VH2 1401 aa10.25□□□□□ -0.77
LRRC28-201ENST00000301981 BAZ1AQ9NRL2 1556 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-201ENST00000301981 PLIN1O60240 522 aa10.24□□□□□ -0.77
LRRC28-201ENST00000301981 CUX2O14529 1486 aa10.23□□□□□ -0.77
LRRC28-201ENST00000301981 HSP90AA1P07900 732 aaKnown RBP10.23□□□□□ -0.77
LRRC28-201ENST00000301981 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
LRRC28-201ENST00000301981 FRAT1Q92837 279 aaPredicted RBP10.22□□□□□ -0.77
LRRC28-201ENST00000301981 L3MBTL2Q969R5 705 aa10.21□□□□□ -0.77
LRRC28-201ENST00000301981 CCDC184Q52MB2 194 aa10.2□□□□□ -0.78
LRRC28-201ENST00000301981 CARMIL1Q5VZK9 1371 aa10.2□□□□□ -0.78
LRRC28-201ENST00000301981 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
LRRC28-201ENST00000301981 FHOD3Q2V2M9 1422 aa10.19□□□□□ -0.78
LRRC28-201ENST00000301981 ZBTB7CA1YPR0 619 aa10.19□□□□□ -0.78
LRRC28-201ENST00000301981 NPM1P06748 294 aaKnown RBP eCLIP10.19□□□□□ -0.78
LRRC28-201ENST00000301981 CFDP1Q9UEE9 299 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-201ENST00000301981 TSPY4P0CV99 314 aa10.18□□□□□ -0.78
LRRC28-201ENST00000301981 TSPY10P0CW01 314 aa10.18□□□□□ -0.78
LRRC28-201ENST00000301981 EIF4G1Q04637 1599 aaKnown RBP10.17□□□□□ -0.78
LRRC28-201ENST00000301981 MPHOSPH9Q99550 1183 aa10.17□□□□□ -0.78
LRRC28-201ENST00000301981 NACADO15069 1562 aa10.15□□□□□ -0.78
LRRC28-201ENST00000301981 PPM1GO15355 546 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-201ENST00000301981 CHMP7Q8WUX9 453 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-201ENST00000301981 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
LRRC28-201ENST00000301981 GZF1Q9H116 711 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-201ENST00000301981 PKD2Q13563 968 aa10.14□□□□□ -0.79
LRRC28-201ENST00000301981 MSH5O43196 834 aa10.14□□□□□ -0.79
LRRC28-201ENST00000301981 CCDC146Q8IYE0 955 aa10.14□□□□□ -0.79
LRRC28-201ENST00000301981 SLKQ9H2G2 1235 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-201ENST00000301981 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
LRRC28-201ENST00000301981 EXOC6Q8TAG9 804 aa10.14□□□□□ -0.79
LRRC28-201ENST00000301981 ESF1Q9H501 851 aaKnown RBP10.13□□□□□ -0.79
LRRC28-201ENST00000301981 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
LRRC28-201ENST00000301981 UPF2Q9HAU5 1272 aaKnown RBP10.13□□□□□ -0.79
LRRC28-201ENST00000301981 SAFB2Q14151 953 aaKnown RBP eCLIP10.13□□□□□ -0.79
LRRC28-201ENST00000301981 ARID3AQ99856 593 aa10.13□□□□□ -0.79
LRRC28-201ENST00000301981 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-201ENST00000301981 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
LRRC28-201ENST00000301981 TOP2AP11388 1531 aaKnown RBP10.11□□□□□ -0.79
LRRC28-201ENST00000301981 NCLP19338 710 aaKnown RBP10.1□□□□□ -0.79
LRRC28-201ENST00000301981 ANO8Q9HCE9 1232 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-201ENST00000301981 RCAN3Q9UKA8 241 aa10.1□□□□□ -0.79
LRRC28-201ENST00000301981 KNSTRNQ9Y448 316 aa10.1□□□□□ -0.79
LRRC28-201ENST00000301981 PHF23Q9BUL5 403 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-201ENST00000301981 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
LRRC28-201ENST00000301981 PHLDB1Q86UU1 1377 aa10.09□□□□□ -0.79
LRRC28-201ENST00000301981 NAP1L5Q96NT1 182 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-201ENST00000301981 PRKRIP1Q9H875 184 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-201ENST00000301981 KIF21BO75037 1637 aa10.07□□□□□ -0.8
LRRC28-201ENST00000301981 IL27Q8NEV9 243 aa10.07□□□□□ -0.8
LRRC28-201ENST00000301981 CLUAP1Q96AJ1 413 aa10.07□□□□□ -0.8
LRRC28-201ENST00000301981 ZNF644Q9H582 1327 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-201ENST00000301981 NUTM2DQ5VT03 806 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-201ENST00000301981 WASHC2AQ641Q2 1341 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms