RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.61
COL1A2-201ENST00000297268 CHGAP10645 457 aaKnown RBP18.82■□□□□ 0.6
COL1A2-201ENST00000297268 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
COL1A2-201ENST00000297268 PPP4R2Q9NY27 417 aa18.82■□□□□ 0.6
COL1A2-201ENST00000297268 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
COL1A2-201ENST00000297268 BECN1Q14457 450 aa18.79■□□□□ 0.6
COL1A2-201ENST00000297268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL1A2-201ENST00000297268 NOP58Q9Y2X3 529 aaKnown RBP18.78■□□□□ 0.6
COL1A2-201ENST00000297268 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
COL1A2-201ENST00000297268 SIN3AQ96ST3 1273 aa18.74■□□□□ 0.59
COL1A2-201ENST00000297268 LAS1LQ9Y4W2 734 aaKnown RBP18.74■□□□□ 0.59
COL1A2-201ENST00000297268 RTN4Q9NQC3 1192 aaKnown RBP18.74■□□□□ 0.59
COL1A2-201ENST00000297268 TSPY4P0CV99 314 aa18.72■□□□□ 0.59
COL1A2-201ENST00000297268 TSPY10P0CW01 314 aa18.72■□□□□ 0.59
COL1A2-201ENST00000297268 TRIM44Q96DX7 344 aaPredicted RBP18.71■□□□□ 0.59
COL1A2-201ENST00000297268 RBM19Q9Y4C8 960 aaKnown RBP18.7■□□□□ 0.58
COL1A2-201ENST00000297268 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
COL1A2-201ENST00000297268 B4GALNT3Q6L9W6 998 aa18.69■□□□□ 0.58
COL1A2-201ENST00000297268 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
COL1A2-201ENST00000297268 WRNQ14191 1432 aaPredicted RBP eCLIP18.67■□□□□ 0.58
COL1A2-201ENST00000297268 NACADO15069 1562 aa18.65■□□□□ 0.58
COL1A2-201ENST00000297268 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.58
COL1A2-201ENST00000297268 DEKP35659 375 aaKnown RBP18.64■□□□□ 0.57
COL1A2-201ENST00000297268 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
COL1A2-201ENST00000297268 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
COL1A2-201ENST00000297268 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
COL1A2-201ENST00000297268 CCER2I3L3R5 266 aa18.59■□□□□ 0.57
COL1A2-201ENST00000297268 TSHZ2Q9NRE2 1034 aa18.57■□□□□ 0.56
COL1A2-201ENST00000297268 RGS3P49796 1198 aa18.56■□□□□ 0.56
COL1A2-201ENST00000297268 CARD11Q9BXL7 1154 aa18.56■□□□□ 0.56
COL1A2-201ENST00000297268 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
COL1A2-201ENST00000297268 NAP1L5Q96NT1 182 aaPredicted RBP18.55■□□□□ 0.56
COL1A2-201ENST00000297268 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
COL1A2-201ENST00000297268 NCLP19338 710 aaKnown RBP18.54■□□□□ 0.56
COL1A2-201ENST00000297268 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
COL1A2-201ENST00000297268 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
COL1A2-201ENST00000297268 ESF1Q9H501 851 aaKnown RBP18.49■□□□□ 0.55
COL1A2-201ENST00000297268 TIMELESSQ9UNS1 1208 aa18.49■□□□□ 0.55
COL1A2-201ENST00000297268 SOGA1O94964 1423 aa18.47■□□□□ 0.55
COL1A2-201ENST00000297268 PTMAP06454 111 aaKnown RBP18.46■□□□□ 0.55
COL1A2-201ENST00000297268 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.55
COL1A2-201ENST00000297268 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
COL1A2-201ENST00000297268 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
COL1A2-201ENST00000297268 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
COL1A2-201ENST00000297268 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
COL1A2-201ENST00000297268 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
COL1A2-201ENST00000297268 DNTTIP2Q5QJE6 756 aaKnown RBP18.41■□□□□ 0.54
COL1A2-201ENST00000297268 CC2D1BQ5T0F9 858 aaKnown RBP18.41■□□□□ 0.54
COL1A2-201ENST00000297268 CFDP1Q9UEE9 299 aaPredicted RBP18.41■□□□□ 0.54
COL1A2-201ENST00000297268 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
COL1A2-201ENST00000297268 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
COL1A2-201ENST00000297268 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.53
COL1A2-201ENST00000297268 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
COL1A2-201ENST00000297268 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
COL1A2-201ENST00000297268 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
COL1A2-201ENST00000297268 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
COL1A2-201ENST00000297268 NPM1P06748 294 aaKnown RBP eCLIP18.36■□□□□ 0.53
COL1A2-201ENST00000297268 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
COL1A2-201ENST00000297268 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
COL1A2-201ENST00000297268 CECR2Q9BXF3 1484 aa18.34■□□□□ 0.53
COL1A2-201ENST00000297268 HSP90AB1P08238 724 aaKnown RBP18.34■□□□□ 0.53
COL1A2-201ENST00000297268 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
COL1A2-201ENST00000297268 TPRNQ4KMQ1 711 aa18.33■□□□□ 0.53
COL1A2-201ENST00000297268 L1TD1Q5T7N2 865 aaKnown RBP18.33■□□□□ 0.53
COL1A2-201ENST00000297268 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.53
COL1A2-201ENST00000297268 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
COL1A2-201ENST00000297268 KCNH8Q96L42 1107 aa18.29■□□□□ 0.52
COL1A2-201ENST00000297268 MAPK8IP3Q9UPT6 1336 aa18.29■□□□□ 0.52
COL1A2-201ENST00000297268 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
COL1A2-201ENST00000297268 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
COL1A2-201ENST00000297268 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.51
COL1A2-201ENST00000297268 SPRYD3Q8NCJ5 442 aa18.26■□□□□ 0.51
COL1A2-201ENST00000297268 IPO9Q96P70 1041 aaKnown RBP18.26■□□□□ 0.51
COL1A2-201ENST00000297268 DCAF11Q8TEB1 546 aa18.26■□□□□ 0.51
COL1A2-201ENST00000297268 MS4A1P11836 297 aa18.25■□□□□ 0.51
COL1A2-201ENST00000297268 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
COL1A2-201ENST00000297268 TMF1P82094 1093 aa18.24■□□□□ 0.51
COL1A2-201ENST00000297268 PLCB2Q00722 1185 aa18.24■□□□□ 0.51
COL1A2-201ENST00000297268 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
COL1A2-201ENST00000297268 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
COL1A2-201ENST00000297268 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
COL1A2-201ENST00000297268 ZRSR1Q15695 479 aaKnown RBP18.22■□□□□ 0.51
COL1A2-201ENST00000297268 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.22■□□□□ 0.51
COL1A2-201ENST00000297268 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
COL1A2-201ENST00000297268 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
COL1A2-201ENST00000297268 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
COL1A2-201ENST00000297268 MSNP26038 577 aaKnown RBP18.2■□□□□ 0.5
COL1A2-201ENST00000297268 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
COL1A2-201ENST00000297268 FOXD1Q16676 465 aa18.18■□□□□ 0.5
COL1A2-201ENST00000297268 KTN1Q86UP2 1357 aaKnown RBP18.18■□□□□ 0.5
COL1A2-201ENST00000297268 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
COL1A2-201ENST00000297268 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
COL1A2-201ENST00000297268 ZBTB7CA1YPR0 619 aa18.15■□□□□ 0.5
COL1A2-201ENST00000297268 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
COL1A2-201ENST00000297268 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
COL1A2-201ENST00000297268 CUX2O14529 1486 aa18.13■□□□□ 0.49
COL1A2-201ENST00000297268 GZF1Q9H116 711 aaPredicted RBP18.13■□□□□ 0.49
COL1A2-201ENST00000297268 RALBP1Q15311 655 aa18.13■□□□□ 0.49
COL1A2-201ENST00000297268 C14orf37Q86TY3 774 aa18.12■□□□□ 0.49
COL1A2-201ENST00000297268 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 753.4 ms