RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
COL1A2-201ENST00000297268 NISCHQ9Y2I1 1504 aa23.42■■□□□ 1.34
COL1A2-201ENST00000297268 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
COL1A2-201ENST00000297268 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.26
COL1A2-201ENST00000297268 EHMT2Q96KQ7 1210 aa22.55■■□□□ 1.2
COL1A2-201ENST00000297268 PELP1Q8IZL8 1130 aaKnown RBP22.47■■□□□ 1.19
COL1A2-201ENST00000297268 PCGF6Q9BYE7 350 aa22.38■■□□□ 1.17
COL1A2-201ENST00000297268 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
COL1A2-201ENST00000297268 APLP2Q06481 763 aa21.97■■□□□ 1.11
COL1A2-201ENST00000297268 CENPBP07199 599 aaPredicted RBP21.94■■□□□ 1.1
COL1A2-201ENST00000297268 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
COL1A2-201ENST00000297268 TTBK1Q5TCY1 1321 aaPredicted RBP21.88■■□□□ 1.09
COL1A2-201ENST00000297268 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
COL1A2-201ENST00000297268 MYT1Q01538 1121 aa21.6■■□□□ 1.05
COL1A2-201ENST00000297268 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
COL1A2-201ENST00000297268 ERICH6Q7L0X2 663 aa21.58■■□□□ 1.05
COL1A2-201ENST00000297268 HRCP23327 699 aa21.52■■□□□ 1.04
COL1A2-201ENST00000297268 YTHDC1Q96MU7 727 aaKnown RBP21.46■■□□□ 1.03
COL1A2-201ENST00000297268 RANGAP1P46060 587 aaPredicted RBP21.38■■□□□ 1.01
COL1A2-201ENST00000297268 TRIM26Q12899 539 aaPredicted RBP21.37■■□□□ 1.01
COL1A2-201ENST00000297268 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
COL1A2-201ENST00000297268 NEFLP07196 543 aa21.24■□□□□ 0.99
COL1A2-201ENST00000297268 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
COL1A2-201ENST00000297268 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
COL1A2-201ENST00000297268 LOC105371045A0A1W2PR82 267 aa21.05■□□□□ 0.96
COL1A2-201ENST00000297268 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
COL1A2-201ENST00000297268 DIEXFQ68CQ4 756 aaKnown RBP20.73■□□□□ 0.91
COL1A2-201ENST00000297268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
COL1A2-201ENST00000297268 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
COL1A2-201ENST00000297268 ITGAEP38570 1179 aa20.64■□□□□ 0.89
COL1A2-201ENST00000297268 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
COL1A2-201ENST00000297268 DAXXQ9UER7 740 aaPredicted RBP20.5■□□□□ 0.87
COL1A2-201ENST00000297268 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
COL1A2-201ENST00000297268 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
COL1A2-201ENST00000297268 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
COL1A2-201ENST00000297268 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
COL1A2-201ENST00000297268 BCANQ96GW7 911 aa20.27■□□□□ 0.83
COL1A2-201ENST00000297268 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
COL1A2-201ENST00000297268 NEUROD1Q13562 356 aa20.07■□□□□ 0.8
COL1A2-201ENST00000297268 FAM50AQ14320 339 aaKnown RBP20.07■□□□□ 0.8
COL1A2-201ENST00000297268 CDK11AQ9UQ88 783 aaPredicted RBP20.04■□□□□ 0.8
COL1A2-201ENST00000297268 ANP32CO43423 234 aa20.02■□□□□ 0.79
COL1A2-201ENST00000297268 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
COL1A2-201ENST00000297268 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
COL1A2-201ENST00000297268 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
COL1A2-201ENST00000297268 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
COL1A2-201ENST00000297268 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
COL1A2-201ENST00000297268 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
COL1A2-201ENST00000297268 ABCC9O60706 1549 aa19.73■□□□□ 0.75
COL1A2-201ENST00000297268 FKBP8Q14318 412 aa19.72■□□□□ 0.75
COL1A2-201ENST00000297268 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
COL1A2-201ENST00000297268 CSRNP3Q8WYN3 585 aa19.69■□□□□ 0.74
COL1A2-201ENST00000297268 ANP32AP39687 249 aaKnown RBP19.69■□□□□ 0.74
COL1A2-201ENST00000297268 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.73
COL1A2-201ENST00000297268 NPM2Q86SE8 214 aaKnown RBP19.57■□□□□ 0.72
COL1A2-201ENST00000297268 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
COL1A2-201ENST00000297268 MIER1Q8N108 512 aa19.5■□□□□ 0.71
COL1A2-201ENST00000297268 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
COL1A2-201ENST00000297268 CANXP27824 592 aaKnown RBP19.48■□□□□ 0.71
COL1A2-201ENST00000297268 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
COL1A2-201ENST00000297268 P3H3Q8IVL6 736 aa19.47■□□□□ 0.71
COL1A2-201ENST00000297268 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
COL1A2-201ENST00000297268 EIF5BO60841 1220 aaKnown RBP19.43■□□□□ 0.7
COL1A2-201ENST00000297268 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
COL1A2-201ENST00000297268 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
COL1A2-201ENST00000297268 FAM9BQ8IZU0 186 aa19.37■□□□□ 0.69
COL1A2-201ENST00000297268 NBR1Q14596 966 aa19.35■□□□□ 0.69
COL1A2-201ENST00000297268 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
COL1A2-201ENST00000297268 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
COL1A2-201ENST00000297268 ARID3CA6NKF2 412 aa19.3■□□□□ 0.68
COL1A2-201ENST00000297268 CCDC136Q96JN2 1154 aa19.28■□□□□ 0.68
COL1A2-201ENST00000297268 IRX6P78412 446 aaPredicted RBP19.24■□□□□ 0.67
COL1A2-201ENST00000297268 ANP32EQ9BTT0 268 aa19.21■□□□□ 0.67
COL1A2-201ENST00000297268 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
COL1A2-201ENST00000297268 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
COL1A2-201ENST00000297268 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
COL1A2-201ENST00000297268 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
COL1A2-201ENST00000297268 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
COL1A2-201ENST00000297268 NEFMP07197 916 aa19.15■□□□□ 0.66
COL1A2-201ENST00000297268 ANP32BQ92688 251 aaKnown RBP19.15■□□□□ 0.66
COL1A2-201ENST00000297268 FBLN2P98095 1184 aa19.15■□□□□ 0.66
COL1A2-201ENST00000297268 UPF2Q9HAU5 1272 aaKnown RBP19.15■□□□□ 0.66
COL1A2-201ENST00000297268 TMC1Q8TDI8 760 aa19.14■□□□□ 0.65
COL1A2-201ENST00000297268 HSP90AA1P07900 732 aaKnown RBP19.11■□□□□ 0.65
COL1A2-201ENST00000297268 GLIPR1L2Q4G1C9 344 aa19.11■□□□□ 0.65
COL1A2-201ENST00000297268 CLIP1P30622 1438 aa19.08■□□□□ 0.64
COL1A2-201ENST00000297268 CHIC2Q9UKJ5 165 aa19.06■□□□□ 0.64
COL1A2-201ENST00000297268 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
COL1A2-201ENST00000297268 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
COL1A2-201ENST00000297268 ARXQ96QS3 562 aa19.03■□□□□ 0.64
COL1A2-201ENST00000297268 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.02■□□□□ 0.63
COL1A2-201ENST00000297268 SUPT16HQ9Y5B9 1047 aaKnown RBP18.99■□□□□ 0.63
COL1A2-201ENST00000297268 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL1A2-201ENST00000297268 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL1A2-201ENST00000297268 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
COL1A2-201ENST00000297268 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
COL1A2-201ENST00000297268 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
COL1A2-201ENST00000297268 KDM2AQ9Y2K7 1162 aa18.88■□□□□ 0.61
COL1A2-201ENST00000297268 EEA1Q15075 1411 aa18.88■□□□□ 0.61
COL1A2-201ENST00000297268 RSF1Q96T23 1441 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 397.4 ms