RNA–Protein interactions for RNA: ENST00000295900.10

ATXN7-201, Transcript of ataxin 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN7, Length 7,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN7-201ENST00000295900 CLIP1P30622 1438 aa19.86■□□□□ 0.77
ATXN7-201ENST00000295900 NPM2Q86SE8 214 aaKnown RBP19.85■□□□□ 0.77
ATXN7-201ENST00000295900 ARXQ96QS3 562 aa19.82■□□□□ 0.76
ATXN7-201ENST00000295900 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
ATXN7-201ENST00000295900 PDS5BQ9NTI5 1447 aa19.78■□□□□ 0.76
ATXN7-201ENST00000295900 CUX2O14529 1486 aa19.75■□□□□ 0.75
ATXN7-201ENST00000295900 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
ATXN7-201ENST00000295900 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
ATXN7-201ENST00000295900 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
ATXN7-201ENST00000295900 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
ATXN7-201ENST00000295900 GGT6Q6P531 493 aa19.71■□□□□ 0.75
ATXN7-201ENST00000295900 POGKQ9P215 609 aa19.71■□□□□ 0.75
ATXN7-201ENST00000295900 DCAF1Q9Y4B6 1507 aa19.7■□□□□ 0.74
ATXN7-201ENST00000295900 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
ATXN7-201ENST00000295900 DDX10Q13206 875 aaKnown RBP19.69■□□□□ 0.74
ATXN7-201ENST00000295900 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.74
ATXN7-201ENST00000295900 GOLGA3Q08378 1498 aa19.69■□□□□ 0.74
ATXN7-201ENST00000295900 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
ATXN7-201ENST00000295900 CARMIL1Q5VZK9 1371 aa19.64■□□□□ 0.74
ATXN7-201ENST00000295900 SOGA1O94964 1423 aa19.63■□□□□ 0.73
ATXN7-201ENST00000295900 CCNB3Q8WWL7 1395 aa19.62■□□□□ 0.73
ATXN7-201ENST00000295900 SOX12O15370 315 aa19.6■□□□□ 0.73
ATXN7-201ENST00000295900 NPHP1O15259 732 aa19.59■□□□□ 0.73
ATXN7-201ENST00000295900 SMARCA2P51531 1590 aa19.58■□□□□ 0.72
ATXN7-201ENST00000295900 SAFB2Q14151 953 aaKnown RBP eCLIP19.57■□□□□ 0.72
ATXN7-201ENST00000295900 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
ATXN7-201ENST00000295900 CARMIL2Q6F5E8 1435 aa19.55■□□□□ 0.72
ATXN7-201ENST00000295900 KANK1Q14678 1352 aa19.54■□□□□ 0.72
ATXN7-201ENST00000295900 HNRNPUQ00839 825 aaKnown RBP eCLIP19.52■□□□□ 0.72
ATXN7-201ENST00000295900 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.71
ATXN7-201ENST00000295900 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
ATXN7-201ENST00000295900 EEA1Q15075 1411 aa19.51■□□□□ 0.71
ATXN7-201ENST00000295900 SENP3-EIF4A1A0A087X0R7 540 aa19.51■□□□□ 0.71
ATXN7-201ENST00000295900 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
ATXN7-201ENST00000295900 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
ATXN7-201ENST00000295900 STK26Q9P289 416 aa19.5■□□□□ 0.71
ATXN7-201ENST00000295900 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
ATXN7-201ENST00000295900 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
ATXN7-201ENST00000295900 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
ATXN7-201ENST00000295900 CARD11Q9BXL7 1154 aa19.46■□□□□ 0.71
ATXN7-201ENST00000295900 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
ATXN7-201ENST00000295900 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
ATXN7-201ENST00000295900 LAS1LQ9Y4W2 734 aaKnown RBP19.44■□□□□ 0.7
ATXN7-201ENST00000295900 MRS2Q9HD23 443 aa19.43■□□□□ 0.7
ATXN7-201ENST00000295900 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
ATXN7-201ENST00000295900 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
ATXN7-201ENST00000295900 SRPK2P78362 688 aaKnown RBP19.4■□□□□ 0.7
ATXN7-201ENST00000295900 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
ATXN7-201ENST00000295900 KNSTRNQ9Y448 316 aa19.4■□□□□ 0.7
ATXN7-201ENST00000295900 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
ATXN7-201ENST00000295900 NUTM2DQ5VT03 806 aaPredicted RBP19.38■□□□□ 0.69
ATXN7-201ENST00000295900 EFCAB2Q5VUJ9 269 aa19.37■□□□□ 0.69
ATXN7-201ENST00000295900 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
ATXN7-201ENST00000295900 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
ATXN7-201ENST00000295900 JPH4Q96JJ6 628 aa19.35■□□□□ 0.69
ATXN7-201ENST00000295900 HSP90AA1P07900 732 aaKnown RBP19.35■□□□□ 0.69
ATXN7-201ENST00000295900 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
ATXN7-201ENST00000295900 KIF3BO15066 747 aa19.33■□□□□ 0.68
ATXN7-201ENST00000295900 FHAD1B1AJZ9 1412 aa19.32■□□□□ 0.68
ATXN7-201ENST00000295900 HNRNPMP52272 730 aaKnown RBP eCLIP19.32■□□□□ 0.682e-6■□□□□ 9.3
ATXN7-201ENST00000295900 MYH16Q9H6N6 1097 aa19.32■□□□□ 0.68
ATXN7-201ENST00000295900 WIZO95785 1651 aa19.32■□□□□ 0.68
ATXN7-201ENST00000295900 GTF3C3Q9Y5Q9 886 aa19.3■□□□□ 0.68
ATXN7-201ENST00000295900 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
ATXN7-201ENST00000295900 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
ATXN7-201ENST00000295900 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.3■□□□□ 0.68
ATXN7-201ENST00000295900 U2SURPO15042 1029 aaKnown RBP19.3■□□□□ 0.68
ATXN7-201ENST00000295900 SIN3AQ96ST3 1273 aa19.28■□□□□ 0.68
ATXN7-201ENST00000295900 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
ATXN7-201ENST00000295900 CC2D1BQ5T0F9 858 aaKnown RBP19.28■□□□□ 0.68
ATXN7-201ENST00000295900 FAM69CQ0P6D2 419 aa19.26■□□□□ 0.67
ATXN7-201ENST00000295900 MAPK8IP3Q9UPT6 1336 aa19.26■□□□□ 0.67
ATXN7-201ENST00000295900 FOXD1Q16676 465 aa19.26■□□□□ 0.67
ATXN7-201ENST00000295900 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
ATXN7-201ENST00000295900 WASHC2CQ9Y4E1 1318 aa19.25■□□□□ 0.67
ATXN7-201ENST00000295900 NUTM2FA1L443 756 aa19.24■□□□□ 0.67
ATXN7-201ENST00000295900 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
ATXN7-201ENST00000295900 FKBP8Q14318 412 aa19.22■□□□□ 0.67
ATXN7-201ENST00000295900 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
ATXN7-201ENST00000295900 NUDCQ9Y266 331 aa19.21■□□□□ 0.67
ATXN7-201ENST00000295900 SPAG9O60271 1321 aaKnown RBP19.2■□□□□ 0.66
ATXN7-201ENST00000295900 UPF2Q9HAU5 1272 aaKnown RBP19.2■□□□□ 0.66
ATXN7-201ENST00000295900 PKD2Q13563 968 aa19.19■□□□□ 0.66
ATXN7-201ENST00000295900 ZNF330Q9Y3S2 320 aaPredicted RBP19.18■□□□□ 0.66
ATXN7-201ENST00000295900 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
ATXN7-201ENST00000295900 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
ATXN7-201ENST00000295900 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
ATXN7-201ENST00000295900 TULP1O00294 542 aaPredicted RBP19.14■□□□□ 0.66
ATXN7-201ENST00000295900 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
ATXN7-201ENST00000295900 ANP32AP39687 249 aaKnown RBP19.13■□□□□ 0.65
ATXN7-201ENST00000295900 TAOK2Q9UL54 1235 aa19.13■□□□□ 0.65
ATXN7-201ENST00000295900 TMF1P82094 1093 aa19.13■□□□□ 0.65
ATXN7-201ENST00000295900 FHOD3Q2V2M9 1422 aa19.13■□□□□ 0.65
ATXN7-201ENST00000295900 PTPRGP23470 1445 aa19.12■□□□□ 0.65
ATXN7-201ENST00000295900 CCDC136Q96JN2 1154 aa19.11■□□□□ 0.65
ATXN7-201ENST00000295900 MEX3CQ5U5Q3 659 aaKnown RBP19.11■□□□□ 0.65
ATXN7-201ENST00000295900 HDGFL2Q7Z4V5 671 aaPredicted RBP19.1■□□□□ 0.65
ATXN7-201ENST00000295900 NUP155O75694 1391 aa19.1■□□□□ 0.65
ATXN7-201ENST00000295900 KANK4Q5T7N3 995 aaPredicted RBP19.1■□□□□ 0.65
ATXN7-201ENST00000295900 GOLGA2Q08379 1002 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms