RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 CUL7Q14999 1698 aa20.01■□□□□ 0.79
NCSTN-201ENST00000294785 EFCAB5A4FU69 1503 aa20■□□□□ 0.79
NCSTN-201ENST00000294785 PCF11O94913 1555 aaKnown RBP19.97■□□□□ 0.79
NCSTN-201ENST00000294785 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
NCSTN-201ENST00000294785 CTTNBP2Q8WZ74 1663 aa19.95■□□□□ 0.78
NCSTN-201ENST00000294785 POLA1P09884 1462 aaPredicted RBP19.94■□□□□ 0.78
NCSTN-201ENST00000294785 YTHDC1Q96MU7 727 aaKnown RBP19.94■□□□□ 0.78
NCSTN-201ENST00000294785 AQRO60306 1485 aaKnown RBP eCLIP19.94■□□□□ 0.781e-6■■■■□ 26
NCSTN-201ENST00000294785 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
NCSTN-201ENST00000294785 RAB3GAP2Q9H2M9 1393 aa19.93■□□□□ 0.78
NCSTN-201ENST00000294785 SETD5Q9C0A6 1442 aa19.91■□□□□ 0.78
NCSTN-201ENST00000294785 MAPKBP1O60336 1514 aa19.91■□□□□ 0.78
NCSTN-201ENST00000294785 WDR97A6NE52 1622 aa19.9■□□□□ 0.78
NCSTN-201ENST00000294785 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.78
NCSTN-201ENST00000294785 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.77
NCSTN-201ENST00000294785 LAMC3Q9Y6N6 1575 aa19.88■□□□□ 0.77
NCSTN-201ENST00000294785 CASKIN1Q8WXD9 1431 aa19.88■□□□□ 0.77
NCSTN-201ENST00000294785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.87■□□□□ 0.77
NCSTN-201ENST00000294785 ITGAEP38570 1179 aa19.84■□□□□ 0.77
NCSTN-201ENST00000294785 FHOD3Q2V2M9 1422 aa19.82■□□□□ 0.76
NCSTN-201ENST00000294785 FMN1Q68DA7 1419 aa19.82■□□□□ 0.76
NCSTN-201ENST00000294785 NESP48681 1621 aa19.81■□□□□ 0.76
NCSTN-201ENST00000294785 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
NCSTN-201ENST00000294785 SAMD9Q5K651 1589 aa19.77■□□□□ 0.76
NCSTN-201ENST00000294785 TIMELESSQ9UNS1 1208 aa19.76■□□□□ 0.75
NCSTN-201ENST00000294785 URB2Q14146 1524 aaKnown RBP19.76■□□□□ 0.75
NCSTN-201ENST00000294785 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
NCSTN-201ENST00000294785 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
NCSTN-201ENST00000294785 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
NCSTN-201ENST00000294785 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
NCSTN-201ENST00000294785 KIF21AQ7Z4S6 1674 aa19.72■□□□□ 0.75
NCSTN-201ENST00000294785 FGD6Q6ZV73 1430 aa19.7■□□□□ 0.74
NCSTN-201ENST00000294785 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
NCSTN-201ENST00000294785 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
NCSTN-201ENST00000294785 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
NCSTN-201ENST00000294785 LRRIQ1Q96JM4 1722 aa19.66■□□□□ 0.74
NCSTN-201ENST00000294785 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
NCSTN-201ENST00000294785 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
NCSTN-201ENST00000294785 MTUS2Q5JR59 1369 aa19.63■□□□□ 0.73
NCSTN-201ENST00000294785 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
NCSTN-201ENST00000294785 HFM1A2PYH4 1435 aa19.61■□□□□ 0.73
NCSTN-201ENST00000294785 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
NCSTN-201ENST00000294785 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
NCSTN-201ENST00000294785 CCDC18Q5T9S5 1454 aa19.59■□□□□ 0.73
NCSTN-201ENST00000294785 PTPN23Q9H3S7 1636 aa19.58■□□□□ 0.73
NCSTN-201ENST00000294785 MYOM3Q5VTT5 1437 aa19.58■□□□□ 0.73
NCSTN-201ENST00000294785 NCOA2Q15596 1464 aa19.58■□□□□ 0.72
NCSTN-201ENST00000294785 SIN3AQ96ST3 1273 aa19.58■□□□□ 0.72
NCSTN-201ENST00000294785 UACAQ9BZF9 1416 aa19.57■□□□□ 0.72
NCSTN-201ENST00000294785 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
NCSTN-201ENST00000294785 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
NCSTN-201ENST00000294785 UGGT2Q9NYU1 1516 aa19.54■□□□□ 0.72
NCSTN-201ENST00000294785 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
NCSTN-201ENST00000294785 HECW1Q76N89 1606 aa19.52■□□□□ 0.72
NCSTN-201ENST00000294785 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
NCSTN-201ENST00000294785 NAIPQ13075 1403 aa19.5■□□□□ 0.71
NCSTN-201ENST00000294785 IQGAP2Q13576 1575 aa19.48■□□□□ 0.71
NCSTN-201ENST00000294785 TCOF1Q13428 1488 aaKnown RBP19.48■□□□□ 0.71
NCSTN-201ENST00000294785 GCC2Q8IWJ2 1684 aa19.47■□□□□ 0.71
NCSTN-201ENST00000294785 TONSLQ96HA7 1378 aa19.47■□□□□ 0.71
NCSTN-201ENST00000294785 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
NCSTN-201ENST00000294785 ADAMTS12P58397 1594 aa19.46■□□□□ 0.71
NCSTN-201ENST00000294785 AKNAQ7Z591 1439 aa19.45■□□□□ 0.7
NCSTN-201ENST00000294785 MAGI3Q5TCQ9 1506 aa19.44■□□□□ 0.7
NCSTN-201ENST00000294785 DDX10Q13206 875 aaKnown RBP19.43■□□□□ 0.7
NCSTN-201ENST00000294785 MYT1Q01538 1121 aa19.43■□□□□ 0.7
NCSTN-201ENST00000294785 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
NCSTN-201ENST00000294785 EPRSP07814 1512 aaKnown RBP19.4■□□□□ 0.7
NCSTN-201ENST00000294785 MIA2Q96PC5 1412 aa19.39■□□□□ 0.69
NCSTN-201ENST00000294785 WDR62O43379 1518 aa19.38■□□□□ 0.69
NCSTN-201ENST00000294785 MRC2Q9UBG0 1479 aa19.38■□□□□ 0.69
NCSTN-201ENST00000294785 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
NCSTN-201ENST00000294785 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
NCSTN-201ENST00000294785 ANP32CO43423 234 aa19.33■□□□□ 0.69
NCSTN-201ENST00000294785 IFT140Q96RY7 1462 aa19.3■□□□□ 0.68
NCSTN-201ENST00000294785 CDK13Q14004 1512 aaKnown RBP19.29■□□□□ 0.68
NCSTN-201ENST00000294785 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
NCSTN-201ENST00000294785 KIAA0556O60303 1618 aa19.27■□□□□ 0.67
NCSTN-201ENST00000294785 DENND4BO75064 1496 aaPredicted RBP19.26■□□□□ 0.67
NCSTN-201ENST00000294785 KIAA0586Q9BVV6 1533 aa19.26■□□□□ 0.67
NCSTN-201ENST00000294785 HIRIP3Q9BW71 556 aaPredicted RBP19.25■□□□□ 0.67
NCSTN-201ENST00000294785 ROCK1Q13464 1354 aa19.24■□□□□ 0.67
NCSTN-201ENST00000294785 KDM6BO15054 1643 aa19.24■□□□□ 0.67
NCSTN-201ENST00000294785 DNMT1P26358 1616 aaKnown RBP19.23■□□□□ 0.67
NCSTN-201ENST00000294785 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
NCSTN-201ENST00000294785 DISP1Q96F81 1524 aa19.21■□□□□ 0.67
NCSTN-201ENST00000294785 RAPGEF6Q8TEU7 1601 aa19.21■□□□□ 0.67
NCSTN-201ENST00000294785 DAPK1P53355 1430 aa19.19■□□□□ 0.66
NCSTN-201ENST00000294785 CHIC2Q9UKJ5 165 aa19.19■□□□□ 0.66
NCSTN-201ENST00000294785 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
NCSTN-201ENST00000294785 NUP153P49790 1475 aaKnown RBP19.17■□□□□ 0.66
NCSTN-201ENST00000294785 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
NCSTN-201ENST00000294785 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
NCSTN-201ENST00000294785 MPHOSPH9Q99550 1183 aa19.16■□□□□ 0.66
NCSTN-201ENST00000294785 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
NCSTN-201ENST00000294785 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.65
NCSTN-201ENST00000294785 CDK11AQ9UQ88 783 aaPredicted RBP19.13■□□□□ 0.65
NCSTN-201ENST00000294785 ABCC5O15440 1437 aa19.13■□□□□ 0.65
NCSTN-201ENST00000294785 RPRD2Q5VT52 1461 aaKnown RBP19.13■□□□□ 0.65
NCSTN-201ENST00000294785 NEFLP07196 543 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms