RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TRIM44Q96DX7 344 aaPredicted RBP21.47■■□□□ 1.03
SSRP1-202ENST00000293880 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
SSRP1-202ENST00000293880 ESF1Q9H501 851 aaKnown RBP21.46■■□□□ 1.03
SSRP1-202ENST00000293880 CDK11BP21127 795 aaKnown RBP21.45■■□□□ 1.02
SSRP1-202ENST00000293880 ANP32EQ9BTT0 268 aa21.42■■□□□ 1.02
SSRP1-202ENST00000293880 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
SSRP1-202ENST00000293880 TULP1O00294 542 aaPredicted RBP21.39■■□□□ 1.02
SSRP1-202ENST00000293880 LAS1LQ9Y4W2 734 aaKnown RBP21.38■■□□□ 1.01
SSRP1-202ENST00000293880 MYH16Q9H6N6 1097 aa21.37■■□□□ 1.01
SSRP1-202ENST00000293880 DNTTIP2Q5QJE6 756 aaKnown RBP21.36■■□□□ 1.01
SSRP1-202ENST00000293880 TAOK2Q9UL54 1235 aa21.36■■□□□ 1.01
SSRP1-202ENST00000293880 NPM1P06748 294 aaKnown RBP eCLIP21.36■■□□□ 1.01
SSRP1-202ENST00000293880 DDRGK1Q96HY6 314 aa21.31■■□□□ 1
SSRP1-202ENST00000293880 PTMAP06454 111 aaKnown RBP21.3■■□□□ 1
SSRP1-202ENST00000293880 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.29■■□□□ 1
SSRP1-202ENST00000293880 BECN1Q14457 450 aa21.28■■□□□ 1
SSRP1-202ENST00000293880 C14orf37Q86TY3 774 aa21.26■□□□□ 0.99
SSRP1-202ENST00000293880 ARID3AQ99856 593 aa21.24■□□□□ 0.99
SSRP1-202ENST00000293880 SUPT16HQ9Y5B9 1047 aaKnown RBP21.23■□□□□ 0.99
SSRP1-202ENST00000293880 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
SSRP1-202ENST00000293880 PLCB2Q00722 1185 aa21.18■□□□□ 0.98
SSRP1-202ENST00000293880 RRP7BPQ9NSQ0 103 aa21.18■□□□□ 0.98
SSRP1-202ENST00000293880 GOLGA6L22H0YM25 854 aa21.16■□□□□ 0.98
SSRP1-202ENST00000293880 ERICH6BQ5W0A0 696 aa21.13■□□□□ 0.97
SSRP1-202ENST00000293880 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
SSRP1-202ENST00000293880 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
SSRP1-202ENST00000293880 RGS3P49796 1198 aa21.11■□□□□ 0.97
SSRP1-202ENST00000293880 NEUROD2Q15784 382 aa21.11■□□□□ 0.97
SSRP1-202ENST00000293880 SPRYD3Q8NCJ5 442 aa21.09■□□□□ 0.97
SSRP1-202ENST00000293880 ZRSR1Q15695 479 aaKnown RBP21.08■□□□□ 0.97
SSRP1-202ENST00000293880 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
SSRP1-202ENST00000293880 RGL3Q3MIN7 710 aa21.07■□□□□ 0.96
SSRP1-202ENST00000293880 FTSJ3Q8IY81 847 aaKnown RBP21.06■□□□□ 0.96
SSRP1-202ENST00000293880 NOP58Q9Y2X3 529 aaKnown RBP21.05■□□□□ 0.96
SSRP1-202ENST00000293880 CASC1Q6TDU7 716 aa21.03■□□□□ 0.96
SSRP1-202ENST00000293880 DEKP35659 375 aaKnown RBP21.01■□□□□ 0.95
SSRP1-202ENST00000293880 FRAT1Q92837 279 aaPredicted RBP21.01■□□□□ 0.95
SSRP1-202ENST00000293880 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
SSRP1-202ENST00000293880 B4GALNT3Q6L9W6 998 aa20.99■□□□□ 0.95
SSRP1-202ENST00000293880 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
SSRP1-202ENST00000293880 MYO15BQ96JP2 1530 aa20.96■□□□□ 0.95
SSRP1-202ENST00000293880 NAP1L2Q9ULW6 460 aaPredicted RBP20.96■□□□□ 0.95
SSRP1-202ENST00000293880 CC2D1BQ5T0F9 858 aaKnown RBP20.95■□□□□ 0.95
SSRP1-202ENST00000293880 TSPY4P0CV99 314 aa20.95■□□□□ 0.94
SSRP1-202ENST00000293880 TSPY10P0CW01 314 aa20.95■□□□□ 0.94
SSRP1-202ENST00000293880 PPP1R15AO75807 674 aaPredicted RBP20.94■□□□□ 0.94
SSRP1-202ENST00000293880 KCNH8Q96L42 1107 aa20.93■□□□□ 0.94
SSRP1-202ENST00000293880 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
SSRP1-202ENST00000293880 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
SSRP1-202ENST00000293880 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
SSRP1-202ENST00000293880 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
SSRP1-202ENST00000293880 PPP4R2Q9NY27 417 aa20.86■□□□□ 0.93
SSRP1-202ENST00000293880 CFAP53Q96M91 514 aa20.85■□□□□ 0.93
SSRP1-202ENST00000293880 HAP1P54257 671 aaPredicted RBP20.84■□□□□ 0.93
SSRP1-202ENST00000293880 OS9Q13438 667 aaPredicted RBP20.83■□□□□ 0.93
SSRP1-202ENST00000293880 SIN3AQ96ST3 1273 aa20.83■□□□□ 0.92
SSRP1-202ENST00000293880 CARD11Q9BXL7 1154 aa20.83■□□□□ 0.92
SSRP1-202ENST00000293880 CLIP1P30622 1438 aa20.82■□□□□ 0.92
SSRP1-202ENST00000293880 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
SSRP1-202ENST00000293880 MAPK8IP3Q9UPT6 1336 aa20.8■□□□□ 0.92
SSRP1-202ENST00000293880 ERCC6Q03468 1493 aa20.8■□□□□ 0.92
SSRP1-202ENST00000293880 GOLGA6L6A8MZA4 724 aa20.79■□□□□ 0.92
SSRP1-202ENST00000293880 TNNT3P45378 269 aaPredicted RBP20.79■□□□□ 0.92
SSRP1-202ENST00000293880 DRC7Q8IY82 874 aa20.79■□□□□ 0.92
SSRP1-202ENST00000293880 FGD1P98174 961 aa20.79■□□□□ 0.92
SSRP1-202ENST00000293880 MSNP26038 577 aaKnown RBP20.77■□□□□ 0.91
SSRP1-202ENST00000293880 CLSTN1O94985 981 aa20.76■□□□□ 0.91
SSRP1-202ENST00000293880 KCNJ4P48050 445 aa20.76■□□□□ 0.91
SSRP1-202ENST00000293880 LMOD2Q6P5Q4 547 aa20.76■□□□□ 0.91
SSRP1-202ENST00000293880 U2SURPO15042 1029 aaKnown RBP20.76■□□□□ 0.91
SSRP1-202ENST00000293880 HSCBQ8IWL3 235 aa20.75■□□□□ 0.91
SSRP1-202ENST00000293880 GZF1Q9H116 711 aaPredicted RBP20.74■□□□□ 0.91
SSRP1-202ENST00000293880 NPHP1O15259 732 aa20.72■□□□□ 0.91
SSRP1-202ENST00000293880 APBB1O00213 710 aa20.71■□□□□ 0.91
SSRP1-202ENST00000293880 SOX12O15370 315 aa20.7■□□□□ 0.91
SSRP1-202ENST00000293880 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
SSRP1-202ENST00000293880 CHAF1AQ13111 956 aaPredicted RBP20.69■□□□□ 0.9
SSRP1-202ENST00000293880 RBM19Q9Y4C8 960 aaKnown RBP20.68■□□□□ 0.9
SSRP1-202ENST00000293880 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
SSRP1-202ENST00000293880 GOLGA6L4A6NEF3 574 aa20.67■□□□□ 0.9
SSRP1-202ENST00000293880 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
SSRP1-202ENST00000293880 L1TD1Q5T7N2 865 aaKnown RBP20.62■□□□□ 0.89
SSRP1-202ENST00000293880 POGKQ9P215 609 aa20.62■□□□□ 0.89
SSRP1-202ENST00000293880 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
SSRP1-202ENST00000293880 NUDCQ9Y266 331 aa20.59■□□□□ 0.89
SSRP1-202ENST00000293880 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
SSRP1-202ENST00000293880 GOLGA2Q08379 1002 aa20.59■□□□□ 0.89
SSRP1-202ENST00000293880 SLKQ9H2G2 1235 aaPredicted RBP20.59■□□□□ 0.89
SSRP1-202ENST00000293880 ISY1Q9ULR0 285 aaKnown RBP20.58■□□□□ 0.89
SSRP1-202ENST00000293880 CDCA8Q53HL2 280 aa20.57■□□□□ 0.88
SSRP1-202ENST00000293880 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSRP1-202ENST00000293880 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
SSRP1-202ENST00000293880 GOLGA3Q08378 1498 aa20.55■□□□□ 0.88
SSRP1-202ENST00000293880 PDE4CQ08493 712 aa20.54■□□□□ 0.88
SSRP1-202ENST00000293880 NRDCO43847 1150 aa20.53■□□□□ 0.88
SSRP1-202ENST00000293880 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
SSRP1-202ENST00000293880 CFDP1Q9UEE9 299 aaPredicted RBP20.52■□□□□ 0.88
SSRP1-202ENST00000293880 GNL2Q13823 731 aaKnown RBP20.52■□□□□ 0.88
SSRP1-202ENST00000293880 PNNQ9H307 717 aaKnown RBP20.51■□□□□ 0.87
SSRP1-202ENST00000293880 NACADO15069 1562 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms