RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 LRRC9Q6ZRR7 1453 aa29.39■■■□□ 2.29
SCUBE1-201ENST00000290460 PCF11O94913 1555 aaKnown RBP29.39■■■□□ 2.29
SCUBE1-201ENST00000290460 MIER1Q8N108 512 aa29.38■■■□□ 2.29
SCUBE1-201ENST00000290460 FHAD1B1AJZ9 1412 aa29.35■■■□□ 2.29
SCUBE1-201ENST00000290460 FHOD3Q2V2M9 1422 aa29.34■■■□□ 2.29
SCUBE1-201ENST00000290460 URB2Q14146 1524 aaKnown RBP29.33■■■□□ 2.29
SCUBE1-201ENST00000290460 CUL7Q14999 1698 aa29.32■■■□□ 2.28
SCUBE1-201ENST00000290460 CFAP43Q8NDM7 1665 aa29.32■■■□□ 2.28
SCUBE1-201ENST00000290460 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
SCUBE1-201ENST00000290460 ATP1B4Q9UN42 357 aaPredicted RBP29.32■■■□□ 2.28
SCUBE1-201ENST00000290460 PHLDB1Q86UU1 1377 aa29.31■■■□□ 2.28
SCUBE1-201ENST00000290460 YTHDC1Q96MU7 727 aaKnown RBP29.3■■■□□ 2.28
SCUBE1-201ENST00000290460 CTTNBP2Q8WZ74 1663 aa29.29■■■□□ 2.28
SCUBE1-201ENST00000290460 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
SCUBE1-201ENST00000290460 GTF3C3Q9Y5Q9 886 aa29.27■■■□□ 2.28
SCUBE1-201ENST00000290460 DNAJC5BQ9UF47 199 aa29.27■■■□□ 2.28
SCUBE1-201ENST00000290460 RAB3GAP2Q9H2M9 1393 aa29.26■■■□□ 2.27
SCUBE1-201ENST00000290460 EFCAB5A4FU69 1503 aa29.23■■■□□ 2.27
SCUBE1-201ENST00000290460 TDRD9Q8NDG6 1382 aaKnown RBP29.21■■■□□ 2.27
SCUBE1-201ENST00000290460 FAM50AQ14320 339 aaKnown RBP29.19■■■□□ 2.26
SCUBE1-201ENST00000290460 FYCO1Q9BQS8 1478 aa29.19■■■□□ 2.26
SCUBE1-201ENST00000290460 ABCA5Q8WWZ7 1642 aa29.16■■■□□ 2.26
SCUBE1-201ENST00000290460 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
SCUBE1-201ENST00000290460 KIF21AQ7Z4S6 1674 aa29.14■■■□□ 2.26
SCUBE1-201ENST00000290460 MAPKBP1O60336 1514 aa29.14■■■□□ 2.25
SCUBE1-201ENST00000290460 SETD5Q9C0A6 1442 aa29.12■■■□□ 2.25
SCUBE1-201ENST00000290460 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
SCUBE1-201ENST00000290460 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
SCUBE1-201ENST00000290460 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.25
SCUBE1-201ENST00000290460 FMN1Q68DA7 1419 aa29.05■■■□□ 2.24
SCUBE1-201ENST00000290460 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
SCUBE1-201ENST00000290460 SAMD9Q5K651 1589 aa29.01■■■□□ 2.23
SCUBE1-201ENST00000290460 LRRIQ1Q96JM4 1722 aa29■■■□□ 2.23
SCUBE1-201ENST00000290460 TARBP1Q13395 1621 aaKnown RBP28.96■■■□□ 2.23
SCUBE1-201ENST00000290460 MTUS2Q5JR59 1369 aa28.92■■■□□ 2.22
SCUBE1-201ENST00000290460 SIN3AQ96ST3 1273 aa28.91■■■□□ 2.22
SCUBE1-201ENST00000290460 FGD6Q6ZV73 1430 aa28.91■■■□□ 2.22
SCUBE1-201ENST00000290460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.88■■■□□ 2.21
SCUBE1-201ENST00000290460 GRIN2BQ13224 1484 aa28.87■■■□□ 2.21
SCUBE1-201ENST00000290460 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
SCUBE1-201ENST00000290460 PELP1Q8IZL8 1130 aaKnown RBP28.83■■■□□ 2.21
SCUBE1-201ENST00000290460 NCOA2Q15596 1464 aa28.8■■■□□ 2.2
SCUBE1-201ENST00000290460 PTPRKQ15262 1439 aa28.78■■■□□ 2.2
SCUBE1-201ENST00000290460 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
SCUBE1-201ENST00000290460 SUPT6HQ7KZ85 1726 aaKnown RBP28.76■■■□□ 2.19
SCUBE1-201ENST00000290460 MYOM3Q5VTT5 1437 aa28.74■■■□□ 2.19
SCUBE1-201ENST00000290460 EHBP1L1Q8N3D4 1523 aa28.72■■■□□ 2.19
SCUBE1-201ENST00000290460 MAGI3Q5TCQ9 1506 aa28.72■■■□□ 2.19
SCUBE1-201ENST00000290460 CCDC18Q5T9S5 1454 aa28.71■■■□□ 2.19
SCUBE1-201ENST00000290460 ADAMTS12P58397 1594 aa28.71■■■□□ 2.19
SCUBE1-201ENST00000290460 MRC2Q9UBG0 1479 aa28.7■■■□□ 2.18
SCUBE1-201ENST00000290460 IQGAP2Q13576 1575 aa28.7■■■□□ 2.18
SCUBE1-201ENST00000290460 PTPN23Q9H3S7 1636 aa28.68■■■□□ 2.18
SCUBE1-201ENST00000290460 HFM1A2PYH4 1435 aa28.68■■■□□ 2.18
SCUBE1-201ENST00000290460 UGGT2Q9NYU1 1516 aa28.66■■■□□ 2.18
SCUBE1-201ENST00000290460 HECW1Q76N89 1606 aa28.62■■■□□ 2.17
SCUBE1-201ENST00000290460 TIMELESSQ9UNS1 1208 aa28.62■■■□□ 2.17
SCUBE1-201ENST00000290460 ARHGEF11O15085 1522 aa28.62■■■□□ 2.17
SCUBE1-201ENST00000290460 NAIPQ13075 1403 aa28.61■■■□□ 2.17
SCUBE1-201ENST00000290460 ZNF608Q9ULD9 1512 aaPredicted RBP28.6■■■□□ 2.17
SCUBE1-201ENST00000290460 UACAQ9BZF9 1416 aa28.59■■■□□ 2.17
SCUBE1-201ENST00000290460 PPP1R15AO75807 674 aaPredicted RBP28.59■■■□□ 2.17
SCUBE1-201ENST00000290460 ARID3CA6NKF2 412 aa28.58■■■□□ 2.17
SCUBE1-201ENST00000290460 EPRSP07814 1512 aaKnown RBP28.57■■■□□ 2.16
SCUBE1-201ENST00000290460 CDK13Q14004 1512 aaKnown RBP28.57■■■□□ 2.16
SCUBE1-201ENST00000290460 HIRIP3Q9BW71 556 aaPredicted RBP28.57■■■□□ 2.16
SCUBE1-201ENST00000290460 DDX10Q13206 875 aaKnown RBP28.55■■■□□ 2.16
SCUBE1-201ENST00000290460 KCNH8Q96L42 1107 aa28.55■■■□□ 2.16
SCUBE1-201ENST00000290460 WDR62O43379 1518 aa28.52■■■□□ 2.16
SCUBE1-201ENST00000290460 TONSLQ96HA7 1378 aa28.51■■■□□ 2.15
SCUBE1-201ENST00000290460 CHIC2Q9UKJ5 165 aa28.51■■■□□ 2.15
SCUBE1-201ENST00000290460 RRP7BPQ9NSQ0 103 aa28.5■■■□□ 2.15
SCUBE1-201ENST00000290460 IFT140Q96RY7 1462 aa28.5■■■□□ 2.15
SCUBE1-201ENST00000290460 TCOF1Q13428 1488 aaKnown RBP28.47■■■□□ 2.15
SCUBE1-201ENST00000290460 GCC2Q8IWJ2 1684 aa28.42■■■□□ 2.14
SCUBE1-201ENST00000290460 KDM6BO15054 1643 aa28.4■■■□□ 2.14
SCUBE1-201ENST00000290460 KIAA0556O60303 1618 aa28.39■■■□□ 2.14
SCUBE1-201ENST00000290460 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
SCUBE1-201ENST00000290460 DISP1Q96F81 1524 aa28.39■■■□□ 2.14
SCUBE1-201ENST00000290460 KIAA0586Q9BVV6 1533 aa28.38■■■□□ 2.13
SCUBE1-201ENST00000290460 MIA2Q96PC5 1412 aa28.35■■■□□ 2.13
SCUBE1-201ENST00000290460 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
SCUBE1-201ENST00000290460 DENND4BO75064 1496 aaPredicted RBP28.34■■■□□ 2.13
SCUBE1-201ENST00000290460 TRIM52Q96A61 297 aa28.33■■■□□ 2.13
SCUBE1-201ENST00000290460 KDM5BQ9UGL1 1544 aa28.33■■■□□ 2.13
SCUBE1-201ENST00000290460 NUP153P49790 1475 aaKnown RBP28.31■■■□□ 2.12
SCUBE1-201ENST00000290460 AKNAQ7Z591 1439 aa28.29■■■□□ 2.12
SCUBE1-201ENST00000290460 RAPGEF6Q8TEU7 1601 aa28.28■■■□□ 2.12
SCUBE1-201ENST00000290460 SUPT16HQ9Y5B9 1047 aaKnown RBP28.27■■■□□ 2.12
SCUBE1-201ENST00000290460 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
SCUBE1-201ENST00000290460 ZNF644Q9H582 1327 aaPredicted RBP28.23■■■□□ 2.11
SCUBE1-201ENST00000290460 DAPK1P53355 1430 aa28.21■■■□□ 2.11
SCUBE1-201ENST00000290460 MPHOSPH9Q99550 1183 aa28.2■■■□□ 2.11
SCUBE1-201ENST00000290460 FOXD1Q16676 465 aa28.2■■■□□ 2.1
SCUBE1-201ENST00000290460 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
SCUBE1-201ENST00000290460 ANP32CO43423 234 aa28.18■■■□□ 2.1
SCUBE1-201ENST00000290460 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
SCUBE1-201ENST00000290460 CHMP7Q8WUX9 453 aaPredicted RBP28.17■■■□□ 2.1
SCUBE1-201ENST00000290460 FBLN2P98095 1184 aa28.16■■■□□ 2.1
SCUBE1-201ENST00000290460 ABCC5O15440 1437 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms