RNA–Protein interactions for RNA: ENST00000275493.6

EGFR-201, Transcript of epidermal growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGFR, Length 9,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-201ENST00000275493 DDX10Q13206 875 aaKnown RBP14.64□□□□□ -0.07
EGFR-201ENST00000275493 RRP7BPQ9NSQ0 103 aa14.63□□□□□ -0.07
EGFR-201ENST00000275493 CCDC180Q9P1Z9 1646 aa14.61□□□□□ -0.07
EGFR-201ENST00000275493 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
EGFR-201ENST00000275493 LMOD2Q6P5Q4 547 aa14.61□□□□□ -0.07
EGFR-201ENST00000275493 NPHP1O15259 732 aa14.61□□□□□ -0.07
EGFR-201ENST00000275493 ZCCHC6Q5VYS8 1495 aaKnown RBP14.61□□□□□ -0.07
EGFR-201ENST00000275493 FKBP8Q14318 412 aa14.59□□□□□ -0.07
EGFR-201ENST00000275493 MRS2Q9HD23 443 aa14.57□□□□□ -0.08
EGFR-201ENST00000275493 PPM1GO15355 546 aaPredicted RBP14.56□□□□□ -0.08
EGFR-201ENST00000275493 RGL3Q3MIN7 710 aa14.56□□□□□ -0.08
EGFR-201ENST00000275493 CFAP53Q96M91 514 aa14.55□□□□□ -0.08
EGFR-201ENST00000275493 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
EGFR-201ENST00000275493 CLIP1P30622 1438 aa14.55□□□□□ -0.08
EGFR-201ENST00000275493 CCDC136Q96JN2 1154 aa14.55□□□□□ -0.08
EGFR-201ENST00000275493 CFDP1Q9UEE9 299 aaPredicted RBP14.53□□□□□ -0.08
EGFR-201ENST00000275493 POGKQ9P215 609 aa14.52□□□□□ -0.08
EGFR-201ENST00000275493 CDCA8Q53HL2 280 aa14.49□□□□□ -0.09
EGFR-201ENST00000275493 EIF4G2P78344 907 aaKnown RBP eCLIP14.49□□□□□ -0.09
EGFR-201ENST00000275493 TULP1O00294 542 aaPredicted RBP14.47□□□□□ -0.09
EGFR-201ENST00000275493 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
EGFR-201ENST00000275493 ACIN1Q9UKV3 1341 aaKnown RBP14.46□□□□□ -0.09
EGFR-201ENST00000275493 MLECQ14165 292 aa14.46□□□□□ -0.09
EGFR-201ENST00000275493 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
EGFR-201ENST00000275493 LAS1LQ9Y4W2 734 aaKnown RBP14.44□□□□□ -0.1
EGFR-201ENST00000275493 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
EGFR-201ENST00000275493 MAPK8IP3Q9UPT6 1336 aa14.44□□□□□ -0.1
EGFR-201ENST00000275493 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
EGFR-201ENST00000275493 CASC1Q6TDU7 716 aa14.43□□□□□ -0.1
EGFR-201ENST00000275493 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
EGFR-201ENST00000275493 KANK1Q14678 1352 aa14.42□□□□□ -0.1
EGFR-201ENST00000275493 KIF27Q86VH2 1401 aa14.42□□□□□ -0.1
EGFR-201ENST00000275493 HDGFP51858 240 aaKnown RBP14.41□□□□□ -0.1
EGFR-201ENST00000275493 FTSJ3Q8IY81 847 aaKnown RBP14.4□□□□□ -0.1
EGFR-201ENST00000275493 NACADO15069 1562 aa14.39□□□□□ -0.11
EGFR-201ENST00000275493 CARD11Q9BXL7 1154 aa14.39□□□□□ -0.11
EGFR-201ENST00000275493 NUDCQ9Y266 331 aa14.39□□□□□ -0.11
EGFR-201ENST00000275493 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
EGFR-201ENST00000275493 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
EGFR-201ENST00000275493 ZRSR1Q15695 479 aaKnown RBP14.37□□□□□ -0.11
EGFR-201ENST00000275493 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
EGFR-201ENST00000275493 OS9Q13438 667 aaPredicted RBP14.35□□□□□ -0.11
EGFR-201ENST00000275493 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
EGFR-201ENST00000275493 IRX6P78412 446 aaPredicted RBP14.35□□□□□ -0.11
EGFR-201ENST00000275493 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
EGFR-201ENST00000275493 EEA1Q15075 1411 aa14.35□□□□□ -0.11
EGFR-201ENST00000275493 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
EGFR-201ENST00000275493 BECN1Q14457 450 aa14.33□□□□□ -0.11
EGFR-201ENST00000275493 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
EGFR-201ENST00000275493 EIF5BO60841 1220 aaKnown RBP14.32□□□□□ -0.12
EGFR-201ENST00000275493 SOX12O15370 315 aa14.31□□□□□ -0.12
EGFR-201ENST00000275493 NBR1Q14596 966 aa14.31□□□□□ -0.12
EGFR-201ENST00000275493 CEP162Q5TB80 1403 aa14.3□□□□□ -0.12
EGFR-201ENST00000275493 U2SURPO15042 1029 aaKnown RBP14.3□□□□□ -0.12
EGFR-201ENST00000275493 GOLGA6L22H0YM25 854 aa14.29□□□□□ -0.12
EGFR-201ENST00000275493 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
EGFR-201ENST00000275493 PNNQ9H307 717 aaKnown RBP14.29□□□□□ -0.12
EGFR-201ENST00000275493 SENP3-EIF4A1A0A087X0R7 540 aa14.28□□□□□ -0.12
EGFR-201ENST00000275493 SRPK2P78362 688 aaKnown RBP14.28□□□□□ -0.12
EGFR-201ENST00000275493 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
EGFR-201ENST00000275493 DDRGK1Q96HY6 314 aa14.26□□□□□ -0.13
EGFR-201ENST00000275493 CC2D1BQ5T0F9 858 aaKnown RBP14.26□□□□□ -0.13
EGFR-201ENST00000275493 FGD1P98174 961 aa14.25□□□□□ -0.13
EGFR-201ENST00000275493 SAFB2Q14151 953 aaKnown RBP eCLIP14.24□□□□□ -0.13
EGFR-201ENST00000275493 NAP1L2Q9ULW6 460 aaPredicted RBP14.24□□□□□ -0.13
EGFR-201ENST00000275493 CHMP4BQ9H444 224 aaKnown RBP14.24□□□□□ -0.13
EGFR-201ENST00000275493 GGT6Q6P531 493 aa14.23□□□□□ -0.13
EGFR-201ENST00000275493 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
EGFR-201ENST00000275493 ISY1Q9ULR0 285 aaKnown RBP14.23□□□□□ -0.13
EGFR-201ENST00000275493 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
EGFR-201ENST00000275493 CLSTN1O94985 981 aa14.22□□□□□ -0.13
EGFR-201ENST00000275493 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
EGFR-201ENST00000275493 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
EGFR-201ENST00000275493 KCNJ4P48050 445 aa14.22□□□□□ -0.13
EGFR-201ENST00000275493 TMF1P82094 1093 aa14.2□□□□□ -0.14
EGFR-201ENST00000275493 STK26Q9P289 416 aa14.2□□□□□ -0.14
EGFR-201ENST00000275493 TMX4Q9H1E5 349 aaPredicted RBP14.19□□□□□ -0.14
EGFR-201ENST00000275493 RTF1Q92541 710 aaKnown RBP14.19□□□□□ -0.14
EGFR-201ENST00000275493 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
EGFR-201ENST00000275493 CUX2O14529 1486 aa14.19□□□□□ -0.14
EGFR-201ENST00000275493 CARMIL2Q6F5E8 1435 aa14.19□□□□□ -0.14
EGFR-201ENST00000275493 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
EGFR-201ENST00000275493 PTMAP06454 111 aaKnown RBP14.17□□□□□ -0.14
EGFR-201ENST00000275493 MS4A1P11836 297 aa14.17□□□□□ -0.14
EGFR-201ENST00000275493 HDGFL2Q7Z4V5 671 aaPredicted RBP14.17□□□□□ -0.14
EGFR-201ENST00000275493 BAZ1AQ9NRL2 1556 aaPredicted RBP14.16□□□□□ -0.14
EGFR-201ENST00000275493 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
EGFR-201ENST00000275493 ZNF330Q9Y3S2 320 aaPredicted RBP14.16□□□□□ -0.14
EGFR-201ENST00000275493 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
EGFR-201ENST00000275493 MIER1Q8N108 512 aa14.15□□□□□ -0.14
EGFR-201ENST00000275493 CARMIL1Q5VZK9 1371 aa14.15□□□□□ -0.14
EGFR-201ENST00000275493 ANP32EQ9BTT0 268 aa14.15□□□□□ -0.14
EGFR-201ENST00000275493 NCBP3Q53F19 620 aaKnown RBP14.13□□□□□ -0.15
EGFR-201ENST00000275493 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
EGFR-201ENST00000275493 GLIPR1L2Q4G1C9 344 aa14.12□□□□□ -0.15
EGFR-201ENST00000275493 TNIKQ9UKE5 1360 aa14.12□□□□□ -0.15
EGFR-201ENST00000275493 GOLGA6L6A8MZA4 724 aa14.12□□□□□ -0.15
EGFR-201ENST00000275493 EID1Q9Y6B2 187 aa14.1□□□□□ -0.15
EGFR-201ENST00000275493 RGS3P49796 1198 aa14.09□□□□□ -0.15
EGFR-201ENST00000275493 HSP90AB1P08238 724 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms