RNA–Protein interactions for RNA: ENST00000272163.8

LBR-201, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBR, Length 3,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-201ENST00000272163 IGF1RP08069 1367 aa13.18□□□□□ -0.3
LBR-201ENST00000272163 TOP2BQ02880 1626 aa13.15□□□□□ -0.3
LBR-201ENST00000272163 TARBP1Q13395 1621 aaKnown RBP13.15□□□□□ -0.3
LBR-201ENST00000272163 APLP2Q06481 763 aa13.14□□□□□ -0.31
LBR-201ENST00000272163 CHIC1Q5VXU3 224 aa13.14□□□□□ -0.31
LBR-201ENST00000272163 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
LBR-201ENST00000272163 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
LBR-201ENST00000272163 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
LBR-201ENST00000272163 RAPGEF2Q9Y4G8 1499 aa13.08□□□□□ -0.32
LBR-201ENST00000272163 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
LBR-201ENST00000272163 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
LBR-201ENST00000272163 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
LBR-201ENST00000272163 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
LBR-201ENST00000272163 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
LBR-201ENST00000272163 CHD1O14646 1710 aa13.07□□□□□ -0.32
LBR-201ENST00000272163 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
LBR-201ENST00000272163 KIAA0586Q9BVV6 1533 aa13.06□□□□□ -0.32
LBR-201ENST00000272163 ARID4BQ4LE39 1312 aaPredicted RBP13.03□□□□□ -0.32
LBR-201ENST00000272163 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.32
LBR-201ENST00000272163 EEA1Q15075 1411 aa13.02□□□□□ -0.32
LBR-201ENST00000272163 NUP160Q12769 1436 aa13.02□□□□□ -0.33
LBR-201ENST00000272163 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
LBR-201ENST00000272163 GOLGA3Q08378 1498 aa12.99□□□□□ -0.33
LBR-201ENST00000272163 ADAMTS12P58397 1594 aa12.99□□□□□ -0.33
LBR-201ENST00000272163 ESF1Q9H501 851 aaKnown RBP12.98□□□□□ -0.33
LBR-201ENST00000272163 PBRM1Q86U86 1689 aa12.96□□□□□ -0.33
LBR-201ENST00000272163 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.34
LBR-201ENST00000272163 CEP170Q5SW79 1584 aa12.94□□□□□ -0.34
LBR-201ENST00000272163 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
LBR-201ENST00000272163 UACAQ9BZF9 1416 aa12.92□□□□□ -0.34
LBR-201ENST00000272163 ZNF777Q9ULD5 760 aaPredicted RBP12.91□□□□□ -0.34
LBR-201ENST00000272163 CUL7Q14999 1698 aa12.9□□□□□ -0.34
LBR-201ENST00000272163 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
LBR-201ENST00000272163 IQGAP2Q13576 1575 aa12.87□□□□□ -0.35
LBR-201ENST00000272163 PLB1Q6P1J6 1458 aa12.86□□□□□ -0.35
LBR-201ENST00000272163 MLECQ14165 292 aa12.84□□□□□ -0.35
LBR-201ENST00000272163 ASXL2Q76L83 1435 aa12.81□□□□□ -0.36
LBR-201ENST00000272163 EFCAB2Q5VUJ9 269 aa12.81□□□□□ -0.36
LBR-201ENST00000272163 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
LBR-201ENST00000272163 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
LBR-201ENST00000272163 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
LBR-201ENST00000272163 ABCC2Q92887 1545 aa12.76□□□□□ -0.37
LBR-201ENST00000272163 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
LBR-201ENST00000272163 PRXQ9BXM0 1461 aa12.75□□□□□ -0.37
LBR-201ENST00000272163 FMN1Q68DA7 1419 aa12.75□□□□□ -0.37
LBR-201ENST00000272163 TEX14Q8IWB6 1497 aa12.75□□□□□ -0.37
LBR-201ENST00000272163 MTUS2Q5JR59 1369 aa12.74□□□□□ -0.37
LBR-201ENST00000272163 CLIP1P30622 1438 aa12.74□□□□□ -0.37
LBR-201ENST00000272163 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
LBR-201ENST00000272163 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
LBR-201ENST00000272163 RAPGEF3O95398 923 aa12.71□□□□□ -0.38
LBR-201ENST00000272163 UGGT2Q9NYU1 1516 aa12.67□□□□□ -0.38
LBR-201ENST00000272163 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
LBR-201ENST00000272163 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
LBR-201ENST00000272163 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
LBR-201ENST00000272163 DISP1Q96F81 1524 aa12.64□□□□□ -0.39
LBR-201ENST00000272163 KIAA0556O60303 1618 aa12.62□□□□□ -0.39
LBR-201ENST00000272163 CCNB3Q8WWL7 1395 aa12.62□□□□□ -0.39
LBR-201ENST00000272163 UHRF1BP1LA0JNW5 1464 aa12.62□□□□□ -0.39
LBR-201ENST00000272163 PHLDB1Q86UU1 1377 aa12.6□□□□□ -0.39
LBR-201ENST00000272163 POGZQ7Z3K3 1410 aa12.6□□□□□ -0.39
LBR-201ENST00000272163 KDM6BO15054 1643 aa12.6□□□□□ -0.39
LBR-201ENST00000272163 SHROOM2Q13796 1616 aa12.6□□□□□ -0.39
LBR-201ENST00000272163 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
LBR-201ENST00000272163 FAM50AQ14320 339 aaKnown RBP12.59□□□□□ -0.39
LBR-201ENST00000272163 GGT6Q6P531 493 aa12.58□□□□□ -0.4
LBR-201ENST00000272163 MAPKBP1O60336 1514 aa12.58□□□□□ -0.4
LBR-201ENST00000272163 ITGAEP38570 1179 aa12.58□□□□□ -0.4
LBR-201ENST00000272163 ATP10BO94823 1461 aa12.57□□□□□ -0.4
LBR-201ENST00000272163 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
LBR-201ENST00000272163 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
LBR-201ENST00000272163 SPAG9O60271 1321 aaKnown RBP12.57□□□□□ -0.4
LBR-201ENST00000272163 STAG3Q9UJ98 1225 aa12.56□□□□□ -0.4
LBR-201ENST00000272163 EFCAB5A4FU69 1503 aa12.55□□□□□ -0.4
LBR-201ENST00000272163 AFAP1Q8N556 730 aa12.55□□□□□ -0.4
LBR-201ENST00000272163 SCAPERQ9BY12 1400 aa12.54□□□□□ -0.4
LBR-201ENST00000272163 ADCY10Q96PN6 1610 aa12.54□□□□□ -0.4
LBR-201ENST00000272163 DENND4BO75064 1496 aaPredicted RBP12.54□□□□□ -0.4
LBR-201ENST00000272163 BCANQ96GW7 911 aa12.54□□□□□ -0.4
LBR-201ENST00000272163 HNRNPMP52272 730 aaKnown RBP eCLIP12.53□□□□□ -0.49e-9■■■■■ 27.9
LBR-201ENST00000272163 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
LBR-201ENST00000272163 PPARGC1BQ86YN6 1023 aaKnown RBP12.51□□□□□ -0.41
LBR-201ENST00000272163 CEP162Q5TB80 1403 aa12.5□□□□□ -0.41
LBR-201ENST00000272163 CTTNBP2Q8WZ74 1663 aa12.5□□□□□ -0.41
LBR-201ENST00000272163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.418e-6■□□□□ 8.2
LBR-201ENST00000272163 AKNAQ7Z591 1439 aa12.5□□□□□ -0.41
LBR-201ENST00000272163 KIF21BO75037 1637 aa12.49□□□□□ -0.41
LBR-201ENST00000272163 FANCAO15360 1455 aa12.49□□□□□ -0.41
LBR-201ENST00000272163 TROQ12816 1431 aaPredicted RBP12.49□□□□□ -0.41
LBR-201ENST00000272163 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
LBR-201ENST00000272163 DIP2BQ9P265 1576 aa12.48□□□□□ -0.41
LBR-201ENST00000272163 ADGRL1O94910 1474 aa12.47□□□□□ -0.41
LBR-201ENST00000272163 ARHGAP35Q9NRY4 1499 aa12.47□□□□□ -0.41
LBR-201ENST00000272163 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
LBR-201ENST00000272163 KIF3BO15066 747 aa12.46□□□□□ -0.41
LBR-201ENST00000272163 RSPH4AQ5TD94 716 aa12.46□□□□□ -0.42
LBR-201ENST00000272163 CDK13Q14004 1512 aaKnown RBP12.45□□□□□ -0.42
LBR-201ENST00000272163 NUP153P49790 1475 aaKnown RBP12.45□□□□□ -0.42
LBR-201ENST00000272163 CHIC2Q9UKJ5 165 aa12.45□□□□□ -0.42
LBR-201ENST00000272163 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms