RNA–Protein interactions for RNA: ENST00000265381.6

APBA1-201, Transcript of amyloid beta precursor protein binding family A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APBA1, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA1-201ENST00000265381 MYH16Q9H6N6 1097 aa19.5■□□□□ 0.71
APBA1-201ENST00000265381 TRIM44Q96DX7 344 aaPredicted RBP19.47■□□□□ 0.71
APBA1-201ENST00000265381 TULP1O00294 542 aaPredicted RBP19.46■□□□□ 0.71
APBA1-201ENST00000265381 NCLP19338 710 aaKnown RBP19.42■□□□□ 0.7
APBA1-201ENST00000265381 LMOD2Q6P5Q4 547 aa19.41■□□□□ 0.7
APBA1-201ENST00000265381 TSPY4P0CV99 314 aa19.41■□□□□ 0.7
APBA1-201ENST00000265381 TSPY10P0CW01 314 aa19.41■□□□□ 0.7
APBA1-201ENST00000265381 BECN1Q14457 450 aa19.4■□□□□ 0.7
APBA1-201ENST00000265381 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
APBA1-201ENST00000265381 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
APBA1-201ENST00000265381 GOLGA6L22H0YM25 854 aa19.36■□□□□ 0.69
APBA1-201ENST00000265381 DDRGK1Q96HY6 314 aa19.36■□□□□ 0.69
APBA1-201ENST00000265381 SENP3-EIF4A1A0A087X0R7 540 aa19.35■□□□□ 0.69
APBA1-201ENST00000265381 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
APBA1-201ENST00000265381 PPM1GO15355 546 aaPredicted RBP19.33■□□□□ 0.69
APBA1-201ENST00000265381 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.69
APBA1-201ENST00000265381 ANP32EQ9BTT0 268 aa19.33■□□□□ 0.69
APBA1-201ENST00000265381 PTMAP06454 111 aaKnown RBP19.32■□□□□ 0.68
APBA1-201ENST00000265381 NPHP1O15259 732 aa19.32■□□□□ 0.68
APBA1-201ENST00000265381 MIER1Q8N108 512 aa19.32■□□□□ 0.68
APBA1-201ENST00000265381 TAOK2Q9UL54 1235 aa19.29■□□□□ 0.68
APBA1-201ENST00000265381 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
APBA1-201ENST00000265381 ZRSR1Q15695 479 aaKnown RBP19.29■□□□□ 0.68
APBA1-201ENST00000265381 DNTTIP2Q5QJE6 756 aaKnown RBP19.29■□□□□ 0.68
APBA1-201ENST00000265381 TPRNQ4KMQ1 711 aa19.28■□□□□ 0.68
APBA1-201ENST00000265381 RRP7BPQ9NSQ0 103 aa19.26■□□□□ 0.67
APBA1-201ENST00000265381 EIF4G2P78344 907 aaKnown RBP eCLIP19.22■□□□□ 0.67
APBA1-201ENST00000265381 MTUS2Q5JR59 1369 aa19.21■□□□□ 0.67
APBA1-201ENST00000265381 MLECQ14165 292 aa19.18■□□□□ 0.66
APBA1-201ENST00000265381 ERICH6BQ5W0A0 696 aa19.17■□□□□ 0.66
APBA1-201ENST00000265381 NAP1L5Q96NT1 182 aaPredicted RBP19.16■□□□□ 0.66
APBA1-201ENST00000265381 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
APBA1-201ENST00000265381 CASC1Q6TDU7 716 aa19.14■□□□□ 0.65
APBA1-201ENST00000265381 RTN4Q9NQC3 1192 aaKnown RBP19.14■□□□□ 0.65
APBA1-201ENST00000265381 PLCB2Q00722 1185 aa19.14■□□□□ 0.65
APBA1-201ENST00000265381 PLEKHD1A6NEE1 506 aa19.11■□□□□ 0.65
APBA1-201ENST00000265381 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
APBA1-201ENST00000265381 SOX12O15370 315 aa19.1■□□□□ 0.65
APBA1-201ENST00000265381 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
APBA1-201ENST00000265381 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
APBA1-201ENST00000265381 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
APBA1-201ENST00000265381 NEUROD2Q15784 382 aa19.08■□□□□ 0.65
APBA1-201ENST00000265381 DCAF1Q9Y4B6 1507 aa19.06■□□□□ 0.64
APBA1-201ENST00000265381 POGKQ9P215 609 aa19.05■□□□□ 0.64
APBA1-201ENST00000265381 RGS3P49796 1198 aa19.05■□□□□ 0.64
APBA1-201ENST00000265381 KNSTRNQ9Y448 316 aa19.02■□□□□ 0.64
APBA1-201ENST00000265381 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
APBA1-201ENST00000265381 FGD1P98174 961 aa18.98■□□□□ 0.63
APBA1-201ENST00000265381 HSP90AB1P08238 724 aaKnown RBP18.98■□□□□ 0.63
APBA1-201ENST00000265381 FRAT1Q92837 279 aaPredicted RBP18.97■□□□□ 0.63
APBA1-201ENST00000265381 GOLGA6L6A8MZA4 724 aa18.97■□□□□ 0.63
APBA1-201ENST00000265381 MAPK8IP3Q9UPT6 1336 aa18.96■□□□□ 0.63
APBA1-201ENST00000265381 CDCA8Q53HL2 280 aa18.95■□□□□ 0.62
APBA1-201ENST00000265381 NOP58Q9Y2X3 529 aaKnown RBP18.95■□□□□ 0.62
APBA1-201ENST00000265381 NRDCO43847 1150 aa18.94■□□□□ 0.62
APBA1-201ENST00000265381 CFDP1Q9UEE9 299 aaPredicted RBP18.94■□□□□ 0.62
APBA1-201ENST00000265381 NAP1L2Q9ULW6 460 aaPredicted RBP18.93■□□□□ 0.62
APBA1-201ENST00000265381 SAFB2Q14151 953 aaKnown RBP eCLIP18.92■□□□□ 0.62
APBA1-201ENST00000265381 KCNJ4P48050 445 aa18.92■□□□□ 0.62
APBA1-201ENST00000265381 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
APBA1-201ENST00000265381 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
APBA1-201ENST00000265381 OS9Q13438 667 aaPredicted RBP18.91■□□□□ 0.62
APBA1-201ENST00000265381 ISY1Q9ULR0 285 aaKnown RBP18.91■□□□□ 0.62
APBA1-201ENST00000265381 CARD11Q9BXL7 1154 aa18.9■□□□□ 0.62
APBA1-201ENST00000265381 CLSTN1O94985 981 aa18.89■□□□□ 0.62
APBA1-201ENST00000265381 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
APBA1-201ENST00000265381 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
APBA1-201ENST00000265381 GOLGA6L4A6NEF3 574 aa18.88■□□□□ 0.61
APBA1-201ENST00000265381 U2SURPO15042 1029 aaKnown RBP18.88■□□□□ 0.61
APBA1-201ENST00000265381 CHAF1AQ13111 956 aaPredicted RBP18.87■□□□□ 0.61
APBA1-201ENST00000265381 CLIP1P30622 1438 aa18.85■□□□□ 0.61
APBA1-201ENST00000265381 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
APBA1-201ENST00000265381 B4GALNT3Q6L9W6 998 aa18.84■□□□□ 0.61
APBA1-201ENST00000265381 CCDC9Q9Y3X0 531 aaKnown RBP18.84■□□□□ 0.61
APBA1-201ENST00000265381 ZNF330Q9Y3S2 320 aaPredicted RBP18.84■□□□□ 0.61
APBA1-201ENST00000265381 CHMP4BQ9H444 224 aaKnown RBP18.84■□□□□ 0.61
APBA1-201ENST00000265381 CC2D1BQ5T0F9 858 aaKnown RBP18.84■□□□□ 0.61
APBA1-201ENST00000265381 MSNP26038 577 aaKnown RBP18.83■□□□□ 0.6
APBA1-201ENST00000265381 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
APBA1-201ENST00000265381 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
APBA1-201ENST00000265381 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
APBA1-201ENST00000265381 MS4A1P11836 297 aa18.8■□□□□ 0.6
APBA1-201ENST00000265381 DRC7Q8IY82 874 aa18.78■□□□□ 0.6
APBA1-201ENST00000265381 SPRYD3Q8NCJ5 442 aa18.78■□□□□ 0.6
APBA1-201ENST00000265381 STK26Q9P289 416 aa18.78■□□□□ 0.6
APBA1-201ENST00000265381 SRPK2P78362 688 aaKnown RBP18.76■□□□□ 0.59
APBA1-201ENST00000265381 L1TD1Q5T7N2 865 aaKnown RBP18.75■□□□□ 0.59
APBA1-201ENST00000265381 GGT6Q6P531 493 aa18.75■□□□□ 0.59
APBA1-201ENST00000265381 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
APBA1-201ENST00000265381 CSB-PGBD3P0DP91 1061 aa18.74■□□□□ 0.59
APBA1-201ENST00000265381 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
APBA1-201ENST00000265381 MCCP23508 829 aa18.71■□□□□ 0.59
APBA1-201ENST00000265381 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
APBA1-201ENST00000265381 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
APBA1-201ENST00000265381 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
APBA1-201ENST00000265381 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
APBA1-201ENST00000265381 GNL2Q13823 731 aaKnown RBP18.65■□□□□ 0.58
APBA1-201ENST00000265381 ARID3AQ99856 593 aa18.65■□□□□ 0.58
APBA1-201ENST00000265381 APBB1O00213 710 aa18.64■□□□□ 0.57
APBA1-201ENST00000265381 DCAF11Q8TEB1 546 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms