RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
SMG6-201ENST00000263073 TRIM44Q96DX7 344 aaPredicted RBP16.03■□□□□ 0.16
SMG6-201ENST00000263073 PLEKHG5O94827 1062 aa16■□□□□ 0.15
SMG6-201ENST00000263073 NAP1L5Q96NT1 182 aaPredicted RBP15.99■□□□□ 0.15
SMG6-201ENST00000263073 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
SMG6-201ENST00000263073 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
SMG6-201ENST00000263073 RRP7BPQ9NSQ0 103 aa15.97■□□□□ 0.15
SMG6-201ENST00000263073 DDRGK1Q96HY6 314 aa15.97■□□□□ 0.15
SMG6-201ENST00000263073 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
SMG6-201ENST00000263073 BECN1Q14457 450 aa15.93■□□□□ 0.14
SMG6-201ENST00000263073 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
SMG6-201ENST00000263073 ARID4BQ4LE39 1312 aaPredicted RBP15.92■□□□□ 0.14
SMG6-201ENST00000263073 EIF4G2P78344 907 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMG6-201ENST00000263073 RGS3P49796 1198 aa15.92■□□□□ 0.14
SMG6-201ENST00000263073 DNTTIP2Q5QJE6 756 aaKnown RBP15.9■□□□□ 0.14
SMG6-201ENST00000263073 PTMAP06454 111 aaKnown RBP15.89■□□□□ 0.13
SMG6-201ENST00000263073 DEKP35659 375 aaKnown RBP15.89■□□□□ 0.13
SMG6-201ENST00000263073 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
SMG6-201ENST00000263073 MYH16Q9H6N6 1097 aa15.88■□□□□ 0.13
SMG6-201ENST00000263073 ZBTB7CA1YPR0 619 aa15.87■□□□□ 0.13
SMG6-201ENST00000263073 NEUROD2Q15784 382 aa15.87■□□□□ 0.13
SMG6-201ENST00000263073 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.86■□□□□ 0.13
SMG6-201ENST00000263073 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
SMG6-201ENST00000263073 RGL3Q3MIN7 710 aa15.85■□□□□ 0.13
SMG6-201ENST00000263073 TAOK2Q9UL54 1235 aa15.85■□□□□ 0.13
SMG6-201ENST00000263073 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
SMG6-201ENST00000263073 PLCB2Q00722 1185 aa15.83■□□□□ 0.12
SMG6-201ENST00000263073 NACADO15069 1562 aa15.83■□□□□ 0.12
SMG6-201ENST00000263073 ESF1Q9H501 851 aaKnown RBP15.82■□□□□ 0.12
SMG6-201ENST00000263073 PPP4R2Q9NY27 417 aa15.81■□□□□ 0.12
SMG6-201ENST00000263073 RBM19Q9Y4C8 960 aaKnown RBP15.81■□□□□ 0.12
SMG6-201ENST00000263073 GOLGA6L22H0YM25 854 aa15.81■□□□□ 0.12
SMG6-201ENST00000263073 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
SMG6-201ENST00000263073 A0A0G2JS52 829 aa15.8■□□□□ 0.12
SMG6-201ENST00000263073 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
SMG6-201ENST00000263073 ERICH6BQ5W0A0 696 aa15.79■□□□□ 0.12
SMG6-201ENST00000263073 CLIP1P30622 1438 aa15.79■□□□□ 0.12
SMG6-201ENST00000263073 FRAT1Q92837 279 aaPredicted RBP15.78■□□□□ 0.12
SMG6-201ENST00000263073 ARID3AQ99856 593 aa15.78■□□□□ 0.12
SMG6-201ENST00000263073 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.11
SMG6-201ENST00000263073 CC2D1BQ5T0F9 858 aaKnown RBP15.74■□□□□ 0.11
SMG6-201ENST00000263073 FTSJ3Q8IY81 847 aaKnown RBP15.74■□□□□ 0.11
SMG6-201ENST00000263073 TULP1O00294 542 aaPredicted RBP15.73■□□□□ 0.11
SMG6-201ENST00000263073 CEP162Q5TB80 1403 aa15.73■□□□□ 0.11
SMG6-201ENST00000263073 TSPY4P0CV99 314 aa15.73■□□□□ 0.11
SMG6-201ENST00000263073 TSPY10P0CW01 314 aa15.73■□□□□ 0.11
SMG6-201ENST00000263073 C14orf37Q86TY3 774 aa15.72■□□□□ 0.11
SMG6-201ENST00000263073 CDK11BP21127 795 aaKnown RBP15.69■□□□□ 0.1
SMG6-201ENST00000263073 HSP90AB1P08238 724 aaKnown RBP15.69■□□□□ 0.1
SMG6-201ENST00000263073 CARD11Q9BXL7 1154 aa15.68■□□□□ 0.1
SMG6-201ENST00000263073 KNSTRNQ9Y448 316 aa15.66■□□□□ 0.1
SMG6-201ENST00000263073 GZF1Q9H116 711 aaPredicted RBP15.65■□□□□ 0.1
SMG6-201ENST00000263073 ZRSR1Q15695 479 aaKnown RBP15.64■□□□□ 0.09
SMG6-201ENST00000263073 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SMG6-201ENST00000263073 KCNH8Q96L42 1107 aa15.63■□□□□ 0.09
SMG6-201ENST00000263073 CASC1Q6TDU7 716 aa15.62■□□□□ 0.09
SMG6-201ENST00000263073 SLKQ9H2G2 1235 aaPredicted RBP15.57■□□□□ 0.08
SMG6-201ENST00000263073 CFAP53Q96M91 514 aa15.56■□□□□ 0.08
SMG6-201ENST00000263073 NAP1L2Q9ULW6 460 aaPredicted RBP15.56■□□□□ 0.08
SMG6-201ENST00000263073 MSNP26038 577 aaKnown RBP15.55■□□□□ 0.08
SMG6-201ENST00000263073 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
SMG6-201ENST00000263073 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
SMG6-201ENST00000263073 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMG6-201ENST00000263073 HSCBQ8IWL3 235 aa15.54■□□□□ 0.08
SMG6-201ENST00000263073 MAPK8IP3Q9UPT6 1336 aa15.53■□□□□ 0.08
SMG6-201ENST00000263073 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
SMG6-201ENST00000263073 APBB1O00213 710 aa15.52■□□□□ 0.07
SMG6-201ENST00000263073 FOXD1Q16676 465 aa15.49■□□□□ 0.07
SMG6-201ENST00000263073 L1TD1Q5T7N2 865 aaKnown RBP15.49■□□□□ 0.07
SMG6-201ENST00000263073 DRC7Q8IY82 874 aa15.48■□□□□ 0.07
SMG6-201ENST00000263073 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
SMG6-201ENST00000263073 OS9Q13438 667 aaPredicted RBP15.48■□□□□ 0.07
SMG6-201ENST00000263073 HSPA5P11021 654 aaKnown RBP15.47■□□□□ 0.07
SMG6-201ENST00000263073 FGD1P98174 961 aa15.47■□□□□ 0.07
SMG6-201ENST00000263073 KCNJ4P48050 445 aa15.46■□□□□ 0.07
SMG6-201ENST00000263073 SOX12O15370 315 aa15.46■□□□□ 0.06
SMG6-201ENST00000263073 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
SMG6-201ENST00000263073 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
SMG6-201ENST00000263073 CFDP1Q9UEE9 299 aaPredicted RBP15.45■□□□□ 0.06
SMG6-201ENST00000263073 CHAF1AQ13111 956 aaPredicted RBP15.43■□□□□ 0.06
SMG6-201ENST00000263073 GOLGA6L4A6NEF3 574 aa15.42■□□□□ 0.06
SMG6-201ENST00000263073 SLC4A3P48751 1232 aa15.41■□□□□ 0.06
SMG6-201ENST00000263073 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
SMG6-201ENST00000263073 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMG6-201ENST00000263073 CDCA8Q53HL2 280 aa15.4■□□□□ 0.06
SMG6-201ENST00000263073 LMOD2Q6P5Q4 547 aa15.4■□□□□ 0.06
SMG6-201ENST00000263073 GOLGA6L6A8MZA4 724 aa15.4■□□□□ 0.06
SMG6-201ENST00000263073 NUDCQ9Y266 331 aa15.4■□□□□ 0.06
SMG6-201ENST00000263073 PNNQ9H307 717 aaKnown RBP15.39■□□□□ 0.05
SMG6-201ENST00000263073 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
SMG6-201ENST00000263073 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
SMG6-201ENST00000263073 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
SMG6-201ENST00000263073 IPO9Q96P70 1041 aaKnown RBP15.38■□□□□ 0.05
SMG6-201ENST00000263073 RCAN3Q9UKA8 241 aa15.38■□□□□ 0.05
SMG6-201ENST00000263073 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
SMG6-201ENST00000263073 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
SMG6-201ENST00000263073 POGKQ9P215 609 aa15.37■□□□□ 0.05
SMG6-201ENST00000263073 CCNB3Q8WWL7 1395 aa15.35■□□□□ 0.05
SMG6-201ENST00000263073 NOL8Q76FK4 1167 aaKnown RBP15.34■□□□□ 0.05
SMG6-201ENST00000263073 HAP1P54257 671 aaPredicted RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms