RNA–Protein interactions for RNA: ENST00000262134.9

LPCAT2-201, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT2, Length 5,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-201ENST00000262134 BECN1Q14457 450 aa17.22■□□□□ 0.35
LPCAT2-201ENST00000262134 RTN4Q9NQC3 1192 aaKnown RBP17.21■□□□□ 0.35
LPCAT2-201ENST00000262134 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
LPCAT2-201ENST00000262134 RBM19Q9Y4C8 960 aaKnown RBP17.2■□□□□ 0.34
LPCAT2-201ENST00000262134 TNIKQ9UKE5 1360 aa17.2■□□□□ 0.34
LPCAT2-201ENST00000262134 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
LPCAT2-201ENST00000262134 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
LPCAT2-201ENST00000262134 MYH16Q9H6N6 1097 aa17.18■□□□□ 0.34
LPCAT2-201ENST00000262134 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
LPCAT2-201ENST00000262134 SIN3AQ96ST3 1273 aa17.17■□□□□ 0.34
LPCAT2-201ENST00000262134 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
LPCAT2-201ENST00000262134 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
LPCAT2-201ENST00000262134 EEA1Q15075 1411 aa17.16■□□□□ 0.34
LPCAT2-201ENST00000262134 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
LPCAT2-201ENST00000262134 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
LPCAT2-201ENST00000262134 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
LPCAT2-201ENST00000262134 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
LPCAT2-201ENST00000262134 B4GALNT3Q6L9W6 998 aa17.14■□□□□ 0.33
LPCAT2-201ENST00000262134 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
LPCAT2-201ENST00000262134 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
LPCAT2-201ENST00000262134 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
LPCAT2-201ENST00000262134 ERICH6BQ5W0A0 696 aa17.11■□□□□ 0.33
LPCAT2-201ENST00000262134 DEKP35659 375 aaKnown RBP17.1■□□□□ 0.33
LPCAT2-201ENST00000262134 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
LPCAT2-201ENST00000262134 PTMAP06454 111 aaKnown RBP17.06■□□□□ 0.32
LPCAT2-201ENST00000262134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
LPCAT2-201ENST00000262134 ZRSR1Q15695 479 aaKnown RBP17.02■□□□□ 0.31
LPCAT2-201ENST00000262134 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
LPCAT2-201ENST00000262134 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
LPCAT2-201ENST00000262134 DNTTIP2Q5QJE6 756 aaKnown RBP17.01■□□□□ 0.31
LPCAT2-201ENST00000262134 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
LPCAT2-201ENST00000262134 NAP1L5Q96NT1 182 aaPredicted RBP16.96■□□□□ 0.3
LPCAT2-201ENST00000262134 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
LPCAT2-201ENST00000262134 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
LPCAT2-201ENST00000262134 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
LPCAT2-201ENST00000262134 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
LPCAT2-201ENST00000262134 SOGA1O94964 1423 aa16.93■□□□□ 0.3
LPCAT2-201ENST00000262134 RGS3P49796 1198 aa16.93■□□□□ 0.3
LPCAT2-201ENST00000262134 CASC1Q6TDU7 716 aa16.92■□□□□ 0.3
LPCAT2-201ENST00000262134 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
LPCAT2-201ENST00000262134 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
LPCAT2-201ENST00000262134 GOLGA6L6A8MZA4 724 aa16.85■□□□□ 0.29
LPCAT2-201ENST00000262134 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
LPCAT2-201ENST00000262134 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
LPCAT2-201ENST00000262134 NRDCO43847 1150 aa16.83■□□□□ 0.28
LPCAT2-201ENST00000262134 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
LPCAT2-201ENST00000262134 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
LPCAT2-201ENST00000262134 VPS8Q8N3P4 1428 aa16.81■□□□□ 0.28
LPCAT2-201ENST00000262134 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
LPCAT2-201ENST00000262134 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
LPCAT2-201ENST00000262134 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
LPCAT2-201ENST00000262134 KNSTRNQ9Y448 316 aa16.79■□□□□ 0.28
LPCAT2-201ENST00000262134 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
LPCAT2-201ENST00000262134 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
LPCAT2-201ENST00000262134 SETD5Q9C0A6 1442 aa16.78■□□□□ 0.28
LPCAT2-201ENST00000262134 NEUROD2Q15784 382 aa16.77■□□□□ 0.28
LPCAT2-201ENST00000262134 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.77■□□□□ 0.27
LPCAT2-201ENST00000262134 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
LPCAT2-201ENST00000262134 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
LPCAT2-201ENST00000262134 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
LPCAT2-201ENST00000262134 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
LPCAT2-201ENST00000262134 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
LPCAT2-201ENST00000262134 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
LPCAT2-201ENST00000262134 FRAT1Q92837 279 aaPredicted RBP16.75■□□□□ 0.27
LPCAT2-201ENST00000262134 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
LPCAT2-201ENST00000262134 RAB3GAP2Q9H2M9 1393 aa16.73■□□□□ 0.27
LPCAT2-201ENST00000262134 HSP90AB1P08238 724 aaKnown RBP16.73■□□□□ 0.27
LPCAT2-201ENST00000262134 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
LPCAT2-201ENST00000262134 A0A0G2JS52 829 aa16.71■□□□□ 0.27
LPCAT2-201ENST00000262134 IPO9Q96P70 1041 aaKnown RBP16.71■□□□□ 0.27
LPCAT2-201ENST00000262134 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
LPCAT2-201ENST00000262134 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
LPCAT2-201ENST00000262134 MS4A1P11836 297 aa16.7■□□□□ 0.26
LPCAT2-201ENST00000262134 CFDP1Q9UEE9 299 aaPredicted RBP16.69■□□□□ 0.26
LPCAT2-201ENST00000262134 MSNP26038 577 aaKnown RBP16.69■□□□□ 0.26
LPCAT2-201ENST00000262134 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
LPCAT2-201ENST00000262134 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
LPCAT2-201ENST00000262134 SPRYD3Q8NCJ5 442 aa16.67■□□□□ 0.26
LPCAT2-201ENST00000262134 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
LPCAT2-201ENST00000262134 TCERG1O14776 1098 aaKnown RBP16.65■□□□□ 0.26
LPCAT2-201ENST00000262134 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
LPCAT2-201ENST00000262134 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
LPCAT2-201ENST00000262134 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
LPCAT2-201ENST00000262134 HSCBQ8IWL3 235 aa16.64■□□□□ 0.25
LPCAT2-201ENST00000262134 RCAN3Q9UKA8 241 aa16.64■□□□□ 0.25
LPCAT2-201ENST00000262134 FGD1P98174 961 aa16.64■□□□□ 0.25
LPCAT2-201ENST00000262134 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
LPCAT2-201ENST00000262134 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
LPCAT2-201ENST00000262134 FOXD1Q16676 465 aa16.63■□□□□ 0.25
LPCAT2-201ENST00000262134 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
LPCAT2-201ENST00000262134 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
LPCAT2-201ENST00000262134 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
LPCAT2-201ENST00000262134 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
LPCAT2-201ENST00000262134 DCAF11Q8TEB1 546 aa16.61■□□□□ 0.25
LPCAT2-201ENST00000262134 TULP1O00294 542 aaPredicted RBP16.61■□□□□ 0.25
LPCAT2-201ENST00000262134 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
LPCAT2-201ENST00000262134 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
LPCAT2-201ENST00000262134 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
LPCAT2-201ENST00000262134 KCNJ4P48050 445 aa16.59■□□□□ 0.25
LPCAT2-201ENST00000262134 CFAP44Q96MT7 982 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms