RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 ZBTB47Q9UFB7 747 aaPredicted RBP21.89■■□□□ 1.09
PRPF40B-201ENST00000261897 SALL2Q9Y467 1007 aaPredicted RBP21.88■■□□□ 1.09
PRPF40B-201ENST00000261897 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
PRPF40B-201ENST00000261897 MRS2Q9HD23 443 aa21.86■■□□□ 1.09
PRPF40B-201ENST00000261897 PAK3O75914 559 aaPredicted RBP21.85■■□□□ 1.09
PRPF40B-201ENST00000261897 EEA1Q15075 1411 aa21.85■■□□□ 1.09
PRPF40B-201ENST00000261897 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
PRPF40B-201ENST00000261897 RAB3GAP2Q9H2M9 1393 aa21.84■■□□□ 1.09
PRPF40B-201ENST00000261897 PPP4R2Q9NY27 417 aa21.83■■□□□ 1.09
PRPF40B-201ENST00000261897 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
PRPF40B-201ENST00000261897 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
PRPF40B-201ENST00000261897 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
PRPF40B-201ENST00000261897 IL27Q8NEV9 243 aa21.79■■□□□ 1.08
PRPF40B-201ENST00000261897 ZNF326Q5BKZ1 582 aaKnown RBP21.79■■□□□ 1.08
PRPF40B-201ENST00000261897 MYT1LQ9UL68 1186 aa21.77■■□□□ 1.08
PRPF40B-201ENST00000261897 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
PRPF40B-201ENST00000261897 PPP1R15AO75807 674 aaPredicted RBP21.73■■□□□ 1.07
PRPF40B-201ENST00000261897 DAXXQ9UER7 740 aaPredicted RBP21.72■■□□□ 1.07
PRPF40B-201ENST00000261897 CHIC2Q9UKJ5 165 aa21.7■■□□□ 1.06
PRPF40B-201ENST00000261897 NEFMP07197 916 aa21.69■■□□□ 1.06
PRPF40B-201ENST00000261897 ARID3CA6NKF2 412 aa21.67■■□□□ 1.06
PRPF40B-201ENST00000261897 ARXQ96QS3 562 aa21.63■■□□□ 1.05
PRPF40B-201ENST00000261897 CCDC184Q52MB2 194 aa21.63■■□□□ 1.05
PRPF40B-201ENST00000261897 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
PRPF40B-201ENST00000261897 SETD5Q9C0A6 1442 aa21.54■■□□□ 1.04
PRPF40B-201ENST00000261897 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
PRPF40B-201ENST00000261897 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
PRPF40B-201ENST00000261897 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
PRPF40B-201ENST00000261897 IPO9Q96P70 1041 aaKnown RBP21.52■■□□□ 1.03
PRPF40B-201ENST00000261897 KIF21BO75037 1637 aa21.51■■□□□ 1.03
PRPF40B-201ENST00000261897 EIF4G2P78344 907 aaKnown RBP eCLIP21.5■■□□□ 1.03
PRPF40B-201ENST00000261897 FOXD1Q16676 465 aa21.5■■□□□ 1.03
PRPF40B-201ENST00000261897 SLC4A3P48751 1232 aa21.45■■□□□ 1.02
PRPF40B-201ENST00000261897 TMC1Q8TDI8 760 aa21.41■■□□□ 1.02
PRPF40B-201ENST00000261897 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
PRPF40B-201ENST00000261897 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
PRPF40B-201ENST00000261897 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
PRPF40B-201ENST00000261897 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
PRPF40B-201ENST00000261897 ARAP1Q96P48 1450 aa21.34■■□□□ 1.01
PRPF40B-201ENST00000261897 WASHC2AQ641Q2 1341 aa21.33■■□□□ 1.01
PRPF40B-201ENST00000261897 SKAP1Q86WV1 359 aa21.32■■□□□ 1
PRPF40B-201ENST00000261897 AKNAQ7Z591 1439 aa21.31■■□□□ 1
PRPF40B-201ENST00000261897 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
PRPF40B-201ENST00000261897 PHLDB1Q86UU1 1377 aa21.27■■□□□ 1
PRPF40B-201ENST00000261897 SYNJ1O43426 1573 aa21.26■□□□□ 0.99
PRPF40B-201ENST00000261897 ERICH6BQ5W0A0 696 aa21.26■□□□□ 0.99
PRPF40B-201ENST00000261897 NACADO15069 1562 aa21.26■□□□□ 0.99
PRPF40B-201ENST00000261897 RRBP1Q9P2E9 1410 aaKnown RBP21.25■□□□□ 0.99
PRPF40B-201ENST00000261897 EXOC6Q8TAG9 804 aa21.23■□□□□ 0.99
PRPF40B-201ENST00000261897 MTUS2Q5JR59 1369 aa21.21■□□□□ 0.99
PRPF40B-201ENST00000261897 L3MBTL2Q969R5 705 aa21.21■□□□□ 0.99
PRPF40B-201ENST00000261897 PLIN1O60240 522 aa21.2■□□□□ 0.98
PRPF40B-201ENST00000261897 KDM2AQ9Y2K7 1162 aa21.19■□□□□ 0.98
PRPF40B-201ENST00000261897 PPM1GO15355 546 aaPredicted RBP21.19■□□□□ 0.98
PRPF40B-201ENST00000261897 PDE4AP27815 886 aa21.19■□□□□ 0.98
PRPF40B-201ENST00000261897 MAPKBP1O60336 1514 aa21.19■□□□□ 0.98
PRPF40B-201ENST00000261897 RGS3P49796 1198 aa21.19■□□□□ 0.98
PRPF40B-201ENST00000261897 ZBED9Q6R2W3 1325 aa21.19■□□□□ 0.98
PRPF40B-201ENST00000261897 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
PRPF40B-201ENST00000261897 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
PRPF40B-201ENST00000261897 ARID4BQ4LE39 1312 aaPredicted RBP21.18■□□□□ 0.98
PRPF40B-201ENST00000261897 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
PRPF40B-201ENST00000261897 KIF27Q86VH2 1401 aa21.15■□□□□ 0.98
PRPF40B-201ENST00000261897 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
PRPF40B-201ENST00000261897 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
PRPF40B-201ENST00000261897 GSE1Q14687 1217 aa21.09■□□□□ 0.97
PRPF40B-201ENST00000261897 FRAT1Q92837 279 aaPredicted RBP21.08■□□□□ 0.96
PRPF40B-201ENST00000261897 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
PRPF40B-201ENST00000261897 RCAN3Q9UKA8 241 aa21.04■□□□□ 0.96
PRPF40B-201ENST00000261897 ARHGAP35Q9NRY4 1499 aa21.03■□□□□ 0.96
PRPF40B-201ENST00000261897 NFKBIBQ15653 356 aa21.03■□□□□ 0.96
PRPF40B-201ENST00000261897 NAP1L5Q96NT1 182 aaPredicted RBP21.02■□□□□ 0.96
PRPF40B-201ENST00000261897 TCERG1O14776 1098 aaKnown RBP21.02■□□□□ 0.95
PRPF40B-201ENST00000261897 SPRYD3Q8NCJ5 442 aa21.02■□□□□ 0.95
PRPF40B-201ENST00000261897 FHOD3Q2V2M9 1422 aa21.01■□□□□ 0.95
PRPF40B-201ENST00000261897 DDRGK1Q96HY6 314 aa21.01■□□□□ 0.95
PRPF40B-201ENST00000261897 SLKQ9H2G2 1235 aaPredicted RBP21.01■□□□□ 0.95
PRPF40B-201ENST00000261897 KIF7Q2M1P5 1343 aa20.99■□□□□ 0.95
PRPF40B-201ENST00000261897 MPHOSPH9Q99550 1183 aa20.98■□□□□ 0.95
PRPF40B-201ENST00000261897 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
PRPF40B-201ENST00000261897 CUX2O14529 1486 aa20.97■□□□□ 0.95
PRPF40B-201ENST00000261897 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
PRPF40B-201ENST00000261897 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
PRPF40B-201ENST00000261897 FRAT2O75474 233 aaPredicted RBP20.96■□□□□ 0.95
PRPF40B-201ENST00000261897 RRP1P56182 461 aaKnown RBP20.96■□□□□ 0.95
PRPF40B-201ENST00000261897 CC2D1BQ5T0F9 858 aaKnown RBP20.96■□□□□ 0.95
PRPF40B-201ENST00000261897 CCDC7Q96M83 1385 aa20.95■□□□□ 0.95
PRPF40B-201ENST00000261897 CDCA7LQ96GN5 454 aa20.95■□□□□ 0.94
PRPF40B-201ENST00000261897 CNTLNQ9NXG0 1405 aa20.94■□□□□ 0.94
PRPF40B-201ENST00000261897 NBPF8Q3BBV2 869 aa20.93■□□□□ 0.94
PRPF40B-201ENST00000261897 USP35Q9P2H5 1018 aa20.93■□□□□ 0.94
PRPF40B-201ENST00000261897 VSIG10Q8N0Z9 540 aa20.92■□□□□ 0.94
PRPF40B-201ENST00000261897 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
PRPF40B-201ENST00000261897 CRBNQ96SW2 442 aa20.91■□□□□ 0.94
PRPF40B-201ENST00000261897 CANXP27824 592 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-201ENST00000261897 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
PRPF40B-201ENST00000261897 BACH2Q9BYV9 841 aa20.9■□□□□ 0.94
PRPF40B-201ENST00000261897 GLIPR1L2Q4G1C9 344 aa20.88■□□□□ 0.93
PRPF40B-201ENST00000261897 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
PRPF40B-201ENST00000261897 RGL3Q3MIN7 710 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms