RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 TIAM1Q13009 1591 aa23.87■■□□□ 1.41
TM9SF1-201ENST00000261789 RAB3GAP2Q9H2M9 1393 aa23.86■■□□□ 1.41
TM9SF1-201ENST00000261789 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
TM9SF1-201ENST00000261789 PHLDB1Q86UU1 1377 aa23.82■■□□□ 1.4
TM9SF1-201ENST00000261789 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
TM9SF1-201ENST00000261789 FAM50AQ14320 339 aaKnown RBP23.81■■□□□ 1.4
TM9SF1-201ENST00000261789 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
TM9SF1-201ENST00000261789 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
TM9SF1-201ENST00000261789 FHOD3Q2V2M9 1422 aa23.75■■□□□ 1.39
TM9SF1-201ENST00000261789 MAPKBP1O60336 1514 aa23.74■■□□□ 1.39
TM9SF1-201ENST00000261789 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
TM9SF1-201ENST00000261789 PCF11O94913 1555 aaKnown RBP23.74■■□□□ 1.39
TM9SF1-201ENST00000261789 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
TM9SF1-201ENST00000261789 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
TM9SF1-201ENST00000261789 SETD5Q9C0A6 1442 aa23.71■■□□□ 1.39
TM9SF1-201ENST00000261789 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
TM9SF1-201ENST00000261789 KIF21AQ7Z4S6 1674 aa23.69■■□□□ 1.38
TM9SF1-201ENST00000261789 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
TM9SF1-201ENST00000261789 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
TM9SF1-201ENST00000261789 ABCA10Q8WWZ4 1543 aa23.66■■□□□ 1.38
TM9SF1-201ENST00000261789 CFAP43Q8NDM7 1665 aa23.64■■□□□ 1.37
TM9SF1-201ENST00000261789 KCNH8Q96L42 1107 aa23.59■■□□□ 1.37
TM9SF1-201ENST00000261789 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
TM9SF1-201ENST00000261789 CASKIN1Q8WXD9 1431 aa23.55■■□□□ 1.36
TM9SF1-201ENST00000261789 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
TM9SF1-201ENST00000261789 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
TM9SF1-201ENST00000261789 EFCAB5A4FU69 1503 aa23.52■■□□□ 1.36
TM9SF1-201ENST00000261789 HIRIP3Q9BW71 556 aaPredicted RBP23.51■■□□□ 1.35
TM9SF1-201ENST00000261789 CUL7Q14999 1698 aa23.51■■□□□ 1.35
TM9SF1-201ENST00000261789 CTTNBP2Q8WZ74 1663 aa23.5■■□□□ 1.35
TM9SF1-201ENST00000261789 DDX10Q13206 875 aaKnown RBP23.49■■□□□ 1.35
TM9SF1-201ENST00000261789 AQRO60306 1485 aaKnown RBP eCLIP23.46■■□□□ 1.35
TM9SF1-201ENST00000261789 FMN1Q68DA7 1419 aa23.44■■□□□ 1.34
TM9SF1-201ENST00000261789 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
TM9SF1-201ENST00000261789 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
TM9SF1-201ENST00000261789 SUPT16HQ9Y5B9 1047 aaKnown RBP23.43■■□□□ 1.34
TM9SF1-201ENST00000261789 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
TM9SF1-201ENST00000261789 FGD6Q6ZV73 1430 aa23.43■■□□□ 1.34
TM9SF1-201ENST00000261789 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
TM9SF1-201ENST00000261789 TARBP1Q13395 1621 aaKnown RBP23.39■■□□□ 1.34
TM9SF1-201ENST00000261789 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.34
TM9SF1-201ENST00000261789 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.33
TM9SF1-201ENST00000261789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.38■■□□□ 1.33
TM9SF1-201ENST00000261789 PPP1R15AO75807 674 aaPredicted RBP23.38■■□□□ 1.33
TM9SF1-201ENST00000261789 LRRIQ1Q96JM4 1722 aa23.37■■□□□ 1.33
TM9SF1-201ENST00000261789 WDR62O43379 1518 aa23.33■■□□□ 1.33
TM9SF1-201ENST00000261789 TIMELESSQ9UNS1 1208 aa23.32■■□□□ 1.32
TM9SF1-201ENST00000261789 CCDC18Q5T9S5 1454 aa23.32■■□□□ 1.32
TM9SF1-201ENST00000261789 SAMD9Q5K651 1589 aa23.32■■□□□ 1.32
TM9SF1-201ENST00000261789 NCOA2Q15596 1464 aa23.31■■□□□ 1.32
TM9SF1-201ENST00000261789 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
TM9SF1-201ENST00000261789 TONSLQ96HA7 1378 aa23.27■■□□□ 1.32
TM9SF1-201ENST00000261789 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
TM9SF1-201ENST00000261789 MYOM3Q5VTT5 1437 aa23.26■■□□□ 1.31
TM9SF1-201ENST00000261789 PTPN23Q9H3S7 1636 aa23.25■■□□□ 1.31
TM9SF1-201ENST00000261789 NAIPQ13075 1403 aa23.24■■□□□ 1.31
TM9SF1-201ENST00000261789 CHIC2Q9UKJ5 165 aa23.24■■□□□ 1.31
TM9SF1-201ENST00000261789 ARID3CA6NKF2 412 aa23.23■■□□□ 1.31
TM9SF1-201ENST00000261789 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
TM9SF1-201ENST00000261789 ERCC6Q03468 1493 aa23.23■■□□□ 1.31
TM9SF1-201ENST00000261789 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
TM9SF1-201ENST00000261789 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
TM9SF1-201ENST00000261789 MAGI3Q5TCQ9 1506 aa23.21■■□□□ 1.31
TM9SF1-201ENST00000261789 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
TM9SF1-201ENST00000261789 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
TM9SF1-201ENST00000261789 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
TM9SF1-201ENST00000261789 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
TM9SF1-201ENST00000261789 BCANQ96GW7 911 aa23.15■■□□□ 1.3
TM9SF1-201ENST00000261789 ANP32CO43423 234 aa23.15■■□□□ 1.3
TM9SF1-201ENST00000261789 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
TM9SF1-201ENST00000261789 UGGT2Q9NYU1 1516 aa23.14■■□□□ 1.3
TM9SF1-201ENST00000261789 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
TM9SF1-201ENST00000261789 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
TM9SF1-201ENST00000261789 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.29
TM9SF1-201ENST00000261789 FKBP8Q14318 412 aa23.08■■□□□ 1.29
TM9SF1-201ENST00000261789 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
TM9SF1-201ENST00000261789 ADAMTS12P58397 1594 aa23.05■■□□□ 1.28
TM9SF1-201ENST00000261789 EPRSP07814 1512 aaKnown RBP23.05■■□□□ 1.28
TM9SF1-201ENST00000261789 KDM5BQ9UGL1 1544 aa23.05■■□□□ 1.28
TM9SF1-201ENST00000261789 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
TM9SF1-201ENST00000261789 KDM6BO15054 1643 aa23.04■■□□□ 1.28
TM9SF1-201ENST00000261789 TSHZ2Q9NRE2 1034 aa23.04■■□□□ 1.28
TM9SF1-201ENST00000261789 FOXD1Q16676 465 aa23.03■■□□□ 1.28
TM9SF1-201ENST00000261789 DENND4BO75064 1496 aaPredicted RBP23.03■■□□□ 1.28
TM9SF1-201ENST00000261789 HECW1Q76N89 1606 aa23.02■■□□□ 1.28
TM9SF1-201ENST00000261789 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.27
TM9SF1-201ENST00000261789 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
TM9SF1-201ENST00000261789 MYT1Q01538 1121 aa22.97■■□□□ 1.27
TM9SF1-201ENST00000261789 MPHOSPH9Q99550 1183 aa22.97■■□□□ 1.27
TM9SF1-201ENST00000261789 HSPA5P11021 654 aaKnown RBP22.97■■□□□ 1.27
TM9SF1-201ENST00000261789 GCC2Q8IWJ2 1684 aa22.94■■□□□ 1.26
TM9SF1-201ENST00000261789 WASHC2AQ641Q2 1341 aa22.94■■□□□ 1.26
TM9SF1-201ENST00000261789 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
TM9SF1-201ENST00000261789 L3MBTL2Q969R5 705 aa22.91■■□□□ 1.26
TM9SF1-201ENST00000261789 MIA2Q96PC5 1412 aa22.9■■□□□ 1.26
TM9SF1-201ENST00000261789 NEFLP07196 543 aa22.87■■□□□ 1.25
TM9SF1-201ENST00000261789 AKNAQ7Z591 1439 aa22.86■■□□□ 1.25
TM9SF1-201ENST00000261789 EIF4G2P78344 907 aaKnown RBP eCLIP22.85■■□□□ 1.25
TM9SF1-201ENST00000261789 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
TM9SF1-201ENST00000261789 C11orf95C9JLR9 678 aaPredicted RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms