RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 STAG3Q9UJ98 1225 aa6.31□□□□□ -1.4
RC3H1-201ENST00000258349 MTUS2Q5JR59 1369 aa6.31□□□□□ -1.4
RC3H1-201ENST00000258349 MYO15BQ96JP2 1530 aa6.3□□□□□ -1.4
RC3H1-201ENST00000258349 ERICH6BQ5W0A0 696 aa6.3□□□□□ -1.4
RC3H1-201ENST00000258349 CEP162Q5TB80 1403 aa6.29□□□□□ -1.4
RC3H1-201ENST00000258349 ARID3CA6NKF2 412 aa6.29□□□□□ -1.4
RC3H1-201ENST00000258349 CEP164Q9UPV0 1460 aa6.28□□□□□ -1.4
RC3H1-201ENST00000258349 PTMAP06454 111 aaKnown RBP6.28□□□□□ -1.4
RC3H1-201ENST00000258349 ZRSR1Q15695 479 aaKnown RBP6.28□□□□□ -1.4
RC3H1-201ENST00000258349 PPM1GO15355 546 aaPredicted RBP6.28□□□□□ -1.4
RC3H1-201ENST00000258349 GOLGA6L6A8MZA4 724 aa6.27□□□□□ -1.4
RC3H1-201ENST00000258349 MIER1Q8N108 512 aa6.27□□□□□ -1.4
RC3H1-201ENST00000258349 EIF4G2P78344 907 aaKnown RBP eCLIP6.27□□□□□ -1.41
RC3H1-201ENST00000258349 FTSJ3Q8IY81 847 aaKnown RBP6.26□□□□□ -1.41
RC3H1-201ENST00000258349 SALL2Q9Y467 1007 aaPredicted RBP6.25□□□□□ -1.41
RC3H1-201ENST00000258349 BAZ1AQ9NRL2 1556 aaPredicted RBP6.25□□□□□ -1.41
RC3H1-201ENST00000258349 NOP58Q9Y2X3 529 aaKnown RBP6.25□□□□□ -1.41
RC3H1-201ENST00000258349 CHGAP10645 457 aaKnown RBP6.25□□□□□ -1.41
RC3H1-201ENST00000258349 CDCA8Q53HL2 280 aa6.25□□□□□ -1.41
RC3H1-201ENST00000258349 BAZ1BQ9UIG0 1483 aaKnown RBP6.25□□□□□ -1.41
RC3H1-201ENST00000258349 DNTTIP2Q5QJE6 756 aaKnown RBP6.24□□□□□ -1.41
RC3H1-201ENST00000258349 NAP1L5Q96NT1 182 aaPredicted RBP6.24□□□□□ -1.41
RC3H1-201ENST00000258349 IRX6P78412 446 aaPredicted RBP6.24□□□□□ -1.41
RC3H1-201ENST00000258349 CHMP4BQ9H444 224 aaKnown RBP6.24□□□□□ -1.41
RC3H1-201ENST00000258349 CHAF1AQ13111 956 aaPredicted RBP6.23□□□□□ -1.41
RC3H1-201ENST00000258349 CFAP53Q96M91 514 aa6.23□□□□□ -1.41
RC3H1-201ENST00000258349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.23□□□□□ -1.414e-7■■□□□ 13
RC3H1-201ENST00000258349 TSPY4P0CV99 314 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 TSPY10P0CW01 314 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 L1TD1Q5T7N2 865 aaKnown RBP6.22□□□□□ -1.41
RC3H1-201ENST00000258349 PPP4R2Q9NY27 417 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 PRDM2Q13029 1718 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 KIF27Q86VH2 1401 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 NRDCO43847 1150 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 KDM2AQ9Y2K7 1162 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 FHAD1B1AJZ9 1412 aa6.22□□□□□ -1.41
RC3H1-201ENST00000258349 KNSTRNQ9Y448 316 aa6.21□□□□□ -1.41
RC3H1-201ENST00000258349 CHIC2Q9UKJ5 165 aa6.21□□□□□ -1.42
RC3H1-201ENST00000258349 MS4A1P11836 297 aa6.21□□□□□ -1.42
RC3H1-201ENST00000258349 PTMSP20962 102 aa6.21□□□□□ -1.42
RC3H1-201ENST00000258349 NPM1P06748 294 aaKnown RBP eCLIP6.2□□□□□ -1.42
RC3H1-201ENST00000258349 HSP90AB1P08238 724 aaKnown RBP6.2□□□□□ -1.42
RC3H1-201ENST00000258349 ARHGAP35Q9NRY4 1499 aa6.19□□□□□ -1.42
RC3H1-201ENST00000258349 TNIKQ9UKE5 1360 aa6.19□□□□□ -1.42
RC3H1-201ENST00000258349 CFAP44Q96MT7 982 aa6.19□□□□□ -1.42
RC3H1-201ENST00000258349 PNNQ9H307 717 aaKnown RBP6.19□□□□□ -1.42
RC3H1-201ENST00000258349 WRNQ14191 1432 aaPredicted RBP eCLIP6.19□□□□□ -1.42
RC3H1-201ENST00000258349 HSCBQ8IWL3 235 aa6.18□□□□□ -1.42
RC3H1-201ENST00000258349 SUPT16HQ9Y5B9 1047 aaKnown RBP6.18□□□□□ -1.42
RC3H1-201ENST00000258349 WIZO95785 1651 aa6.18□□□□□ -1.42
RC3H1-201ENST00000258349 MSNP26038 577 aaKnown RBP6.18□□□□□ -1.42
RC3H1-201ENST00000258349 EIF4G1Q04637 1599 aaKnown RBP6.17□□□□□ -1.42
RC3H1-201ENST00000258349 LAS1LQ9Y4W2 734 aaKnown RBP6.17□□□□□ -1.42
RC3H1-201ENST00000258349 RRP7BPQ9NSQ0 103 aa6.16□□□□□ -1.42
RC3H1-201ENST00000258349 SMARCA2P51531 1590 aa6.16□□□□□ -1.42
RC3H1-201ENST00000258349 MAPK8IP3Q9UPT6 1336 aa6.16□□□□□ -1.42
RC3H1-201ENST00000258349 PPP1R15AO75807 674 aaPredicted RBP6.15□□□□□ -1.42
RC3H1-201ENST00000258349 MCCP23508 829 aa6.15□□□□□ -1.42
RC3H1-201ENST00000258349 CCNB3Q8WWL7 1395 aa6.15□□□□□ -1.43
RC3H1-201ENST00000258349 KANK1Q14678 1352 aa6.14□□□□□ -1.43
RC3H1-201ENST00000258349 ARID4BQ4LE39 1312 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-201ENST00000258349 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-201ENST00000258349 HIRIP3Q9BW71 556 aaPredicted RBP6.14□□□□□ -1.43
RC3H1-201ENST00000258349 NUDCQ9Y266 331 aa6.13□□□□□ -1.43
RC3H1-201ENST00000258349 DEKP35659 375 aaKnown RBP6.13□□□□□ -1.43
RC3H1-201ENST00000258349 CCER2I3L3R5 266 aa6.13□□□□□ -1.43
RC3H1-201ENST00000258349 CARD11Q9BXL7 1154 aa6.13□□□□□ -1.43
RC3H1-201ENST00000258349 ABCC8Q09428 1581 aa6.13□□□□□ -1.43
RC3H1-201ENST00000258349 GOLGA6L4A6NEF3 574 aa6.12□□□□□ -1.43
RC3H1-201ENST00000258349 FGD1P98174 961 aa6.12□□□□□ -1.43
RC3H1-201ENST00000258349 SETD5Q9C0A6 1442 aa6.12□□□□□ -1.43
RC3H1-201ENST00000258349 RGS3P49796 1198 aa6.12□□□□□ -1.43
RC3H1-201ENST00000258349 DRC7Q8IY82 874 aa6.12□□□□□ -1.43
RC3H1-201ENST00000258349 GBP4Q96PP9 640 aa6.12□□□□□ -1.43
RC3H1-201ENST00000258349 C14orf37Q86TY3 774 aa6.12□□□□□ -1.43
RC3H1-201ENST00000258349 RTN4Q9NQC3 1192 aaKnown RBP6.12□□□□□ -1.43
RC3H1-201ENST00000258349 KTN1Q86UP2 1357 aaKnown RBP6.11□□□□□ -1.43
RC3H1-201ENST00000258349 KCNJ4P48050 445 aa6.11□□□□□ -1.43
RC3H1-201ENST00000258349 TOP2AP11388 1531 aaKnown RBP6.11□□□□□ -1.43
RC3H1-201ENST00000258349 OS9Q13438 667 aaPredicted RBP6.11□□□□□ -1.43
RC3H1-201ENST00000258349 SYAP1Q96A49 352 aaPredicted RBP6.11□□□□□ -1.43
RC3H1-201ENST00000258349 EIF3AQ14152 1382 aaKnown RBP6.11□□□□□ -1.43
RC3H1-201ENST00000258349 PLPPR3Q6T4P5 718 aa6.1□□□□□ -1.43
RC3H1-201ENST00000258349 PLEKHD1A6NEE1 506 aa6.1□□□□□ -1.43
RC3H1-201ENST00000258349 KIAA2012Q0VF49 1180 aa6.1□□□□□ -1.43
RC3H1-201ENST00000258349 ERCC6Q03468 1493 aa6.1□□□□□ -1.43
RC3H1-201ENST00000258349 TPRNQ4KMQ1 711 aa6.1□□□□□ -1.43
RC3H1-201ENST00000258349 VPS8Q8N3P4 1428 aa6.1□□□□□ -1.43
RC3H1-201ENST00000258349 CFDP1Q9UEE9 299 aaPredicted RBP6.1□□□□□ -1.43
RC3H1-201ENST00000258349 PLCB2Q00722 1185 aa6.09□□□□□ -1.43
RC3H1-201ENST00000258349 A0A0G2JS52 829 aa6.09□□□□□ -1.43
RC3H1-201ENST00000258349 TIMELESSQ9UNS1 1208 aa6.09□□□□□ -1.43
RC3H1-201ENST00000258349 ZBTB7CA1YPR0 619 aa6.09□□□□□ -1.43
RC3H1-201ENST00000258349 PHF14O94880 888 aa6.09□□□□□ -1.43
RC3H1-201ENST00000258349 FRAT1Q92837 279 aaPredicted RBP6.09□□□□□ -1.43
RC3H1-201ENST00000258349 USP35Q9P2H5 1018 aa6.09□□□□□ -1.44
RC3H1-201ENST00000258349 TMF1P82094 1093 aa6.08□□□□□ -1.44
RC3H1-201ENST00000258349 SMARCA4P51532 1647 aa6.08□□□□□ -1.44
RC3H1-201ENST00000258349 B4GALNT3Q6L9W6 998 aa6.08□□□□□ -1.44
RC3H1-201ENST00000258349 HAP1P54257 671 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms