RNA–Protein interactions for RNA: ENST00000256367.2

TTC9-201, Transcript of tetratricopeptide repeat domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9, Length 5,217 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9-201ENST00000256367 CFDP1Q9UEE9 299 aaPredicted RBP29.71■■■□□ 2.35
TTC9-201ENST00000256367 SALL2Q9Y467 1007 aaPredicted RBP29.71■■■□□ 2.35
TTC9-201ENST00000256367 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
TTC9-201ENST00000256367 EIF4G2P78344 907 aaKnown RBP eCLIP29.7■■■□□ 2.35
TTC9-201ENST00000256367 MRS2Q9HD23 443 aa29.67■■■□□ 2.34
TTC9-201ENST00000256367 MROH2BQ7Z745 1585 aa29.65■■■□□ 2.34
TTC9-201ENST00000256367 ANP32AP39687 249 aaKnown RBP29.64■■■□□ 2.33
TTC9-201ENST00000256367 MIER1Q8N108 512 aa29.61■■■□□ 2.33
TTC9-201ENST00000256367 WDR43Q15061 677 aaKnown RBP eCLIP29.6■■■□□ 2.33
TTC9-201ENST00000256367 SOGA1O94964 1423 aa29.6■■■□□ 2.33
TTC9-201ENST00000256367 CUX2O14529 1486 aa29.59■■■□□ 2.33
TTC9-201ENST00000256367 CARMIL1Q5VZK9 1371 aa29.59■■■□□ 2.33
TTC9-201ENST00000256367 CCDC88BA6NC98 1476 aa29.56■■■□□ 2.32
TTC9-201ENST00000256367 NPM2Q86SE8 214 aaKnown RBP29.53■■■□□ 2.32
TTC9-201ENST00000256367 RGL3Q3MIN7 710 aa29.53■■■□□ 2.32
TTC9-201ENST00000256367 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
TTC9-201ENST00000256367 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
TTC9-201ENST00000256367 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.44■■■□□ 2.3
TTC9-201ENST00000256367 PPP1R15AO75807 674 aaPredicted RBP29.43■■■□□ 2.3
TTC9-201ENST00000256367 SENP3Q9H4L4 574 aaPredicted RBP29.42■■■□□ 2.3
TTC9-201ENST00000256367 CCDC136Q96JN2 1154 aa29.4■■■□□ 2.3
TTC9-201ENST00000256367 EIF4G1Q04637 1599 aaKnown RBP29.39■■■□□ 2.3
TTC9-201ENST00000256367 CCNB3Q8WWL7 1395 aa29.37■■■□□ 2.29
TTC9-201ENST00000256367 ABCC8Q09428 1581 aa29.37■■■□□ 2.29
TTC9-201ENST00000256367 SIN3AQ96ST3 1273 aa29.33■■■□□ 2.29
TTC9-201ENST00000256367 UPF2Q9HAU5 1272 aaKnown RBP29.31■■■□□ 2.28
TTC9-201ENST00000256367 CARD11Q9BXL7 1154 aa29.31■■■□□ 2.28
TTC9-201ENST00000256367 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
TTC9-201ENST00000256367 CDCA8Q53HL2 280 aa29.27■■■□□ 2.28
TTC9-201ENST00000256367 ARID4BQ4LE39 1312 aaPredicted RBP29.25■■■□□ 2.27
TTC9-201ENST00000256367 VPS8Q8N3P4 1428 aa29.24■■■□□ 2.27
TTC9-201ENST00000256367 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
TTC9-201ENST00000256367 HSP90AA1P07900 732 aaKnown RBP29.22■■■□□ 2.27
TTC9-201ENST00000256367 IRX6P78412 446 aaPredicted RBP29.21■■■□□ 2.27
TTC9-201ENST00000256367 SCAF1Q9H7N4 1312 aaKnown RBP29.2■■■□□ 2.26
TTC9-201ENST00000256367 KNSTRNQ9Y448 316 aa29.19■■■□□ 2.26
TTC9-201ENST00000256367 WIZO95785 1651 aa29.18■■■□□ 2.26
TTC9-201ENST00000256367 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
TTC9-201ENST00000256367 C14orf37Q86TY3 774 aa29.13■■■□□ 2.25
TTC9-201ENST00000256367 KANK4Q5T7N3 995 aaPredicted RBP29.11■■■□□ 2.25
TTC9-201ENST00000256367 CFAP53Q96M91 514 aa29.11■■■□□ 2.25
TTC9-201ENST00000256367 ARHGAP35Q9NRY4 1499 aa29.09■■■□□ 2.25
TTC9-201ENST00000256367 ZBTB7CA1YPR0 619 aa29.08■■■□□ 2.25
TTC9-201ENST00000256367 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
TTC9-201ENST00000256367 CARMIL2Q6F5E8 1435 aa29.06■■■□□ 2.24
TTC9-201ENST00000256367 PLEKHG5O94827 1062 aa29.06■■■□□ 2.24
TTC9-201ENST00000256367 SETD5Q9C0A6 1442 aa29.04■■■□□ 2.24
TTC9-201ENST00000256367 TIMELESSQ9UNS1 1208 aa29.03■■■□□ 2.24
TTC9-201ENST00000256367 MYH16Q9H6N6 1097 aa29.01■■■□□ 2.23
TTC9-201ENST00000256367 DCAF11Q8TEB1 546 aa29■■■□□ 2.23
TTC9-201ENST00000256367 SENP3-EIF4A1A0A087X0R7 540 aa29■■■□□ 2.23
TTC9-201ENST00000256367 FMN1Q68DA7 1419 aa29■■■□□ 2.23
TTC9-201ENST00000256367 ATAD2BQ9ULI0 1458 aa28.99■■■□□ 2.23
TTC9-201ENST00000256367 POGKQ9P215 609 aa28.99■■■□□ 2.23
TTC9-201ENST00000256367 KANK1Q14678 1352 aa28.98■■■□□ 2.23
TTC9-201ENST00000256367 PPM1GO15355 546 aaPredicted RBP28.96■■■□□ 2.23
TTC9-201ENST00000256367 ANP32BQ92688 251 aaKnown RBP28.89■■■□□ 2.22
TTC9-201ENST00000256367 SMARCA4P51532 1647 aa28.89■■■□□ 2.21
TTC9-201ENST00000256367 A0A0G2JS52 829 aa28.89■■■□□ 2.21
TTC9-201ENST00000256367 RAPGEF2Q9Y4G8 1499 aa28.88■■■□□ 2.21
TTC9-201ENST00000256367 TMF1P82094 1093 aa28.87■■■□□ 2.21
TTC9-201ENST00000256367 PKD2Q13563 968 aa28.87■■■□□ 2.21
TTC9-201ENST00000256367 SUPT16HQ9Y5B9 1047 aaKnown RBP28.86■■■□□ 2.21
TTC9-201ENST00000256367 CC2D1BQ5T0F9 858 aaKnown RBP28.85■■■□□ 2.21
TTC9-201ENST00000256367 NUDCQ9Y266 331 aa28.85■■■□□ 2.21
TTC9-201ENST00000256367 NEUROD2Q15784 382 aa28.84■■■□□ 2.21
TTC9-201ENST00000256367 MAPK8IP3Q9UPT6 1336 aa28.82■■■□□ 2.2
TTC9-201ENST00000256367 TNNT2P45379 298 aaPredicted RBP28.8■■■□□ 2.2
TTC9-201ENST00000256367 RAB3GAP2Q9H2M9 1393 aa28.8■■■□□ 2.2
TTC9-201ENST00000256367 FOXD1Q16676 465 aa28.79■■■□□ 2.2
TTC9-201ENST00000256367 MLECQ14165 292 aa28.79■■■□□ 2.2
TTC9-201ENST00000256367 GGT6Q6P531 493 aa28.78■■■□□ 2.2
TTC9-201ENST00000256367 EFCAB2Q5VUJ9 269 aa28.78■■■□□ 2.2
TTC9-201ENST00000256367 FHOD3Q2V2M9 1422 aa28.78■■■□□ 2.2
TTC9-201ENST00000256367 HAP1P54257 671 aaPredicted RBP28.77■■■□□ 2.2
TTC9-201ENST00000256367 HSPA5P11021 654 aaKnown RBP28.75■■■□□ 2.19
TTC9-201ENST00000256367 MPHOSPH9Q99550 1183 aa28.75■■■□□ 2.19
TTC9-201ENST00000256367 ANKRD30AQ9BXX3 1397 aa28.73■■■□□ 2.19
TTC9-201ENST00000256367 NBR1Q14596 966 aa28.72■■■□□ 2.19
TTC9-201ENST00000256367 HDGFP51858 240 aaKnown RBP28.71■■■□□ 2.19
TTC9-201ENST00000256367 NUP155O75694 1391 aa28.71■■■□□ 2.19
TTC9-201ENST00000256367 FTSJ3Q8IY81 847 aaKnown RBP28.71■■■□□ 2.19
TTC9-201ENST00000256367 TRHP20396 242 aaPredicted RBP28.71■■■□□ 2.19
TTC9-201ENST00000256367 LAS1LQ9Y4W2 734 aaKnown RBP28.7■■■□□ 2.18
TTC9-201ENST00000256367 LMOD2Q6P5Q4 547 aa28.68■■■□□ 2.18
TTC9-201ENST00000256367 U2SURPO15042 1029 aaKnown RBP28.67■■■□□ 2.18
TTC9-201ENST00000256367 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
TTC9-201ENST00000256367 SRPK2P78362 688 aaKnown RBP28.65■■■□□ 2.18
TTC9-201ENST00000256367 JPH4Q96JJ6 628 aa28.65■■■□□ 2.18
TTC9-201ENST00000256367 CCER2I3L3R5 266 aa28.62■■■□□ 2.17
TTC9-201ENST00000256367 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
TTC9-201ENST00000256367 EIF5BO60841 1220 aaKnown RBP28.61■■■□□ 2.17
TTC9-201ENST00000256367 SAFB2Q14151 953 aaKnown RBP eCLIP28.61■■■□□ 2.17
TTC9-201ENST00000256367 DDRGK1Q96HY6 314 aa28.6■■■□□ 2.17
TTC9-201ENST00000256367 BECN1Q14457 450 aa28.59■■■□□ 2.17
TTC9-201ENST00000256367 HNRNPMP52272 730 aaKnown RBP eCLIP28.59■■■□□ 2.17
TTC9-201ENST00000256367 PPP4R2Q9NY27 417 aa28.59■■■□□ 2.17
TTC9-201ENST00000256367 CCDC18Q5T9S5 1454 aa28.59■■■□□ 2.17
TTC9-201ENST00000256367 FRAT1Q92837 279 aaPredicted RBP28.58■■■□□ 2.17
TTC9-201ENST00000256367 PNNQ9H307 717 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms