RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 MTUS2Q5JR59 1369 aa24.15■■□□□ 1.46
NDFIP1-201ENST00000253814 MRS2Q9HD23 443 aa24.14■■□□□ 1.46
NDFIP1-201ENST00000253814 RBM19Q9Y4C8 960 aaKnown RBP24.13■■□□□ 1.45
NDFIP1-201ENST00000253814 NBR1Q14596 966 aa24.09■■□□□ 1.45
NDFIP1-201ENST00000253814 SALL2Q9Y467 1007 aaPredicted RBP24.08■■□□□ 1.44
NDFIP1-201ENST00000253814 NPM2Q86SE8 214 aaKnown RBP24.06■■□□□ 1.44
NDFIP1-201ENST00000253814 SETD5Q9C0A6 1442 aa24.05■■□□□ 1.44
NDFIP1-201ENST00000253814 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
NDFIP1-201ENST00000253814 DAXXQ9UER7 740 aaPredicted RBP24.03■■□□□ 1.44
NDFIP1-201ENST00000253814 EIF4G2P78344 907 aaKnown RBP eCLIP24.02■■□□□ 1.44
NDFIP1-201ENST00000253814 CUX2O14529 1486 aa23.99■■□□□ 1.43
NDFIP1-201ENST00000253814 KIF21BO75037 1637 aa23.97■■□□□ 1.43
NDFIP1-201ENST00000253814 CARMIL1Q5VZK9 1371 aa23.96■■□□□ 1.43
NDFIP1-201ENST00000253814 ANP32AP39687 249 aaKnown RBP23.95■■□□□ 1.42
NDFIP1-201ENST00000253814 B4GALNT3Q6L9W6 998 aa23.95■■□□□ 1.42
NDFIP1-201ENST00000253814 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
NDFIP1-201ENST00000253814 CCDC136Q96JN2 1154 aa23.95■■□□□ 1.42
NDFIP1-201ENST00000253814 BCL11AQ9H165 835 aa23.94■■□□□ 1.42
NDFIP1-201ENST00000253814 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
NDFIP1-201ENST00000253814 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
NDFIP1-201ENST00000253814 CCER2I3L3R5 266 aa23.9■■□□□ 1.42
NDFIP1-201ENST00000253814 FBLN2P98095 1184 aa23.9■■□□□ 1.42
NDFIP1-201ENST00000253814 FOXD1Q16676 465 aa23.85■■□□□ 1.41
NDFIP1-201ENST00000253814 TMC1Q8TDI8 760 aa23.85■■□□□ 1.41
NDFIP1-201ENST00000253814 SLC4A1APQ9BWU0 796 aaKnown RBP23.83■■□□□ 1.4
NDFIP1-201ENST00000253814 HSPA5P11021 654 aaKnown RBP23.82■■□□□ 1.4
NDFIP1-201ENST00000253814 TIMELESSQ9UNS1 1208 aa23.81■■□□□ 1.4
NDFIP1-201ENST00000253814 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
NDFIP1-201ENST00000253814 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
NDFIP1-201ENST00000253814 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
NDFIP1-201ENST00000253814 PPP4R2Q9NY27 417 aa23.78■■□□□ 1.4
NDFIP1-201ENST00000253814 MYT1LQ9UL68 1186 aa23.78■■□□□ 1.4
NDFIP1-201ENST00000253814 ZBTB47Q9UFB7 747 aaPredicted RBP23.74■■□□□ 1.39
NDFIP1-201ENST00000253814 FHOD3Q2V2M9 1422 aa23.73■■□□□ 1.39
NDFIP1-201ENST00000253814 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
NDFIP1-201ENST00000253814 PHLDB1Q86UU1 1377 aa23.68■■□□□ 1.38
NDFIP1-201ENST00000253814 RRBP1Q9P2E9 1410 aaKnown RBP23.62■■□□□ 1.37
NDFIP1-201ENST00000253814 L3MBTL2Q969R5 705 aa23.59■■□□□ 1.37
NDFIP1-201ENST00000253814 IGF1RP08069 1367 aa23.58■■□□□ 1.37
NDFIP1-201ENST00000253814 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
NDFIP1-201ENST00000253814 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
NDFIP1-201ENST00000253814 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
NDFIP1-201ENST00000253814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.36
NDFIP1-201ENST00000253814 MPHOSPH9Q99550 1183 aa23.53■■□□□ 1.36
NDFIP1-201ENST00000253814 DEKP35659 375 aaKnown RBP23.53■■□□□ 1.36
NDFIP1-201ENST00000253814 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
NDFIP1-201ENST00000253814 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
NDFIP1-201ENST00000253814 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
NDFIP1-201ENST00000253814 LAS1LQ9Y4W2 734 aaKnown RBP23.49■■□□□ 1.35
NDFIP1-201ENST00000253814 CARD11Q9BXL7 1154 aa23.48■■□□□ 1.35
NDFIP1-201ENST00000253814 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
NDFIP1-201ENST00000253814 CFDP1Q9UEE9 299 aaPredicted RBP23.45■■□□□ 1.35
NDFIP1-201ENST00000253814 RTN4Q9NQC3 1192 aaKnown RBP23.45■■□□□ 1.34
NDFIP1-201ENST00000253814 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
NDFIP1-201ENST00000253814 ERICH3Q5RHP9 1530 aa23.43■■□□□ 1.34
NDFIP1-201ENST00000253814 PRKRIP1Q9H875 184 aaPredicted RBP23.42■■□□□ 1.34
NDFIP1-201ENST00000253814 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
NDFIP1-201ENST00000253814 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
NDFIP1-201ENST00000253814 FMN1Q68DA7 1419 aa23.42■■□□□ 1.34
NDFIP1-201ENST00000253814 CANXP27824 592 aaKnown RBP23.41■■□□□ 1.34
NDFIP1-201ENST00000253814 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
NDFIP1-201ENST00000253814 TOP2BQ02880 1626 aa23.39■■□□□ 1.34
NDFIP1-201ENST00000253814 CCDC184Q52MB2 194 aa23.38■■□□□ 1.33
NDFIP1-201ENST00000253814 WASHC2AQ641Q2 1341 aa23.38■■□□□ 1.33
NDFIP1-201ENST00000253814 EIF5BO60841 1220 aaKnown RBP23.35■■□□□ 1.33
NDFIP1-201ENST00000253814 CUX1P39880 1505 aa23.34■■□□□ 1.33
NDFIP1-201ENST00000253814 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
NDFIP1-201ENST00000253814 ERICH6BQ5W0A0 696 aa23.33■■□□□ 1.32
NDFIP1-201ENST00000253814 PKD2Q13563 968 aa23.31■■□□□ 1.32
NDFIP1-201ENST00000253814 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
NDFIP1-201ENST00000253814 NEFMP07197 916 aa23.31■■□□□ 1.32
NDFIP1-201ENST00000253814 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
NDFIP1-201ENST00000253814 FGD6Q6ZV73 1430 aa23.31■■□□□ 1.32
NDFIP1-201ENST00000253814 FANCIQ9NVI1 1328 aa23.29■■□□□ 1.32
NDFIP1-201ENST00000253814 MSH5O43196 834 aa23.29■■□□□ 1.32
NDFIP1-201ENST00000253814 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
NDFIP1-201ENST00000253814 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
NDFIP1-201ENST00000253814 ARXQ96QS3 562 aa23.28■■□□□ 1.32
NDFIP1-201ENST00000253814 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
NDFIP1-201ENST00000253814 NUDCQ9Y266 331 aa23.26■■□□□ 1.31
NDFIP1-201ENST00000253814 UACAQ9BZF9 1416 aa23.24■■□□□ 1.31
NDFIP1-201ENST00000253814 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
NDFIP1-201ENST00000253814 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
NDFIP1-201ENST00000253814 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
NDFIP1-201ENST00000253814 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
NDFIP1-201ENST00000253814 RGS3P49796 1198 aa23.19■■□□□ 1.3
NDFIP1-201ENST00000253814 IPO9Q96P70 1041 aaKnown RBP23.17■■□□□ 1.3
NDFIP1-201ENST00000253814 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
NDFIP1-201ENST00000253814 ZNF644Q9H582 1327 aaPredicted RBP23.16■■□□□ 1.3
NDFIP1-201ENST00000253814 MAPKBP1O60336 1514 aa23.16■■□□□ 1.3
NDFIP1-201ENST00000253814 CCDC7Q96M83 1385 aa23.16■■□□□ 1.3
NDFIP1-201ENST00000253814 RCAN3Q9UKA8 241 aa23.16■■□□□ 1.3
NDFIP1-201ENST00000253814 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
NDFIP1-201ENST00000253814 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
NDFIP1-201ENST00000253814 CFTRP13569 1480 aa23.14■■□□□ 1.29
NDFIP1-201ENST00000253814 UNC13AQ9UPW8 1703 aa23.12■■□□□ 1.29
NDFIP1-201ENST00000253814 CHGAP10645 457 aaKnown RBP23.12■■□□□ 1.29
NDFIP1-201ENST00000253814 C11orf95C9JLR9 678 aaPredicted RBP23.11■■□□□ 1.29
NDFIP1-201ENST00000253814 NBPF8Q3BBV2 869 aa23.11■■□□□ 1.29
NDFIP1-201ENST00000253814 MYOM3Q5VTT5 1437 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms