RNA–Protein interactions for RNA: ENST00000244769.8

ATXN1-201, Transcript of ataxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN1, Length 10,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-201ENST00000244769 CFAP53Q96M91 514 aa11.76□□□□□ -0.53
ATXN1-201ENST00000244769 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
ATXN1-201ENST00000244769 NPHP1O15259 732 aa11.75□□□□□ -0.53
ATXN1-201ENST00000244769 L1TD1Q5T7N2 865 aaKnown RBP11.74□□□□□ -0.53
ATXN1-201ENST00000244769 A0A0G2JS52 829 aa11.74□□□□□ -0.53
ATXN1-201ENST00000244769 NRDCO43847 1150 aa11.74□□□□□ -0.53
ATXN1-201ENST00000244769 MTUS2Q5JR59 1369 aa11.73□□□□□ -0.53
ATXN1-201ENST00000244769 GOLGA6L6A8MZA4 724 aa11.73□□□□□ -0.53
ATXN1-201ENST00000244769 CHMP4AQ9BY43 222 aa11.72□□□□□ -0.53
ATXN1-201ENST00000244769 TRIM44Q96DX7 344 aaPredicted RBP11.71□□□□□ -0.53
ATXN1-201ENST00000244769 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
ATXN1-201ENST00000244769 PLPPR3Q6T4P5 718 aa11.7□□□□□ -0.54
ATXN1-201ENST00000244769 MS4A1P11836 297 aa11.7□□□□□ -0.54
ATXN1-201ENST00000244769 TNNT2P45379 298 aaPredicted RBP11.7□□□□□ -0.54
ATXN1-201ENST00000244769 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
ATXN1-201ENST00000244769 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
ATXN1-201ENST00000244769 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
ATXN1-201ENST00000244769 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
ATXN1-201ENST00000244769 TMX4Q9H1E5 349 aaPredicted RBP11.67□□□□□ -0.54
ATXN1-201ENST00000244769 NUDCQ9Y266 331 aa11.66□□□□□ -0.54
ATXN1-201ENST00000244769 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
ATXN1-201ENST00000244769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■□□□□ 11.3
ATXN1-201ENST00000244769 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
ATXN1-201ENST00000244769 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
ATXN1-201ENST00000244769 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
ATXN1-201ENST00000244769 EEA1Q15075 1411 aa11.6□□□□□ -0.55
ATXN1-201ENST00000244769 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
ATXN1-201ENST00000244769 FTSJ3Q8IY81 847 aaKnown RBP11.58□□□□□ -0.56
ATXN1-201ENST00000244769 KANK1Q14678 1352 aa11.57□□□□□ -0.56
ATXN1-201ENST00000244769 FAM9BQ8IZU0 186 aa11.57□□□□□ -0.56
ATXN1-201ENST00000244769 HDAC5Q9UQL6 1122 aa11.56□□□□□ -0.56
ATXN1-201ENST00000244769 ARXQ96QS3 562 aa11.56□□□□□ -0.56
ATXN1-201ENST00000244769 CCDC34Q96HJ3 373 aa11.56□□□□□ -0.56
ATXN1-201ENST00000244769 CHAF1AQ13111 956 aaPredicted RBP11.56□□□□□ -0.56
ATXN1-201ENST00000244769 ERCC6Q03468 1493 aa11.54□□□□□ -0.56
ATXN1-201ENST00000244769 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
ATXN1-201ENST00000244769 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
ATXN1-201ENST00000244769 FGD1P98174 961 aa11.53□□□□□ -0.56
ATXN1-201ENST00000244769 CECR2Q9BXF3 1484 aa11.53□□□□□ -0.56
ATXN1-201ENST00000244769 KIAA2012Q0VF49 1180 aa11.52□□□□□ -0.56
ATXN1-201ENST00000244769 MRS2Q9HD23 443 aa11.52□□□□□ -0.57
ATXN1-201ENST00000244769 CLIP1P30622 1438 aa11.52□□□□□ -0.57
ATXN1-201ENST00000244769 CEP162Q5TB80 1403 aa11.52□□□□□ -0.57
ATXN1-201ENST00000244769 MCCP23508 829 aa11.51□□□□□ -0.57
ATXN1-201ENST00000244769 POGKQ9P215 609 aa11.5□□□□□ -0.57
ATXN1-201ENST00000244769 KDM2AQ9Y2K7 1162 aa11.5□□□□□ -0.57
ATXN1-201ENST00000244769 DNTTIP2Q5QJE6 756 aaKnown RBP11.49□□□□□ -0.57
ATXN1-201ENST00000244769 FKBP8Q14318 412 aa11.49□□□□□ -0.57
ATXN1-201ENST00000244769 MIER1Q8N108 512 aa11.49□□□□□ -0.57
ATXN1-201ENST00000244769 HIRIP3Q9BW71 556 aaPredicted RBP11.49□□□□□ -0.57
ATXN1-201ENST00000244769 PTMAP06454 111 aaKnown RBP11.48□□□□□ -0.57
ATXN1-201ENST00000244769 CALD1Q05682 793 aaKnown RBP11.48□□□□□ -0.57
ATXN1-201ENST00000244769 NACADO15069 1562 aa11.48□□□□□ -0.57
ATXN1-201ENST00000244769 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
ATXN1-201ENST00000244769 KCNJ4P48050 445 aa11.47□□□□□ -0.57
ATXN1-201ENST00000244769 CFDP1Q9UEE9 299 aaPredicted RBP11.46□□□□□ -0.57
ATXN1-201ENST00000244769 HTATSF1O43719 755 aaKnown RBP11.46□□□□□ -0.57
ATXN1-201ENST00000244769 PTMSP20962 102 aa11.46□□□□□ -0.57
ATXN1-201ENST00000244769 ABCC8Q09428 1581 aa11.46□□□□□ -0.58
ATXN1-201ENST00000244769 GOLGA6L4A6NEF3 574 aa11.46□□□□□ -0.58
ATXN1-201ENST00000244769 FHAD1B1AJZ9 1412 aa11.45□□□□□ -0.58
ATXN1-201ENST00000244769 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
ATXN1-201ENST00000244769 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
ATXN1-201ENST00000244769 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
ATXN1-201ENST00000244769 KCNH8Q96L42 1107 aa11.43□□□□□ -0.58
ATXN1-201ENST00000244769 SENP3-EIF4A1A0A087X0R7 540 aa11.43□□□□□ -0.58
ATXN1-201ENST00000244769 DDX10Q13206 875 aaKnown RBP11.43□□□□□ -0.58
ATXN1-201ENST00000244769 ERICH6BQ5W0A0 696 aa11.43□□□□□ -0.58
ATXN1-201ENST00000244769 PPM1GO15355 546 aaPredicted RBP11.42□□□□□ -0.58
ATXN1-201ENST00000244769 AEBP2Q6ZN18 517 aaPredicted RBP11.42□□□□□ -0.58
ATXN1-201ENST00000244769 CHMP4CQ96CF2 233 aa11.42□□□□□ -0.58
ATXN1-201ENST00000244769 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
ATXN1-201ENST00000244769 RTF1Q92541 710 aaKnown RBP11.42□□□□□ -0.58
ATXN1-201ENST00000244769 SOGA1O94964 1423 aa11.42□□□□□ -0.58
ATXN1-201ENST00000244769 IRX6P78412 446 aaPredicted RBP11.41□□□□□ -0.58
ATXN1-201ENST00000244769 GOLGA3Q08378 1498 aa11.41□□□□□ -0.58
ATXN1-201ENST00000244769 TULP1O00294 542 aaPredicted RBP11.4□□□□□ -0.58
ATXN1-201ENST00000244769 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.59
ATXN1-201ENST00000244769 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
ATXN1-201ENST00000244769 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
ATXN1-201ENST00000244769 CLSTN1O94985 981 aa11.38□□□□□ -0.59
ATXN1-201ENST00000244769 CARD11Q9BXL7 1154 aa11.38□□□□□ -0.59
ATXN1-201ENST00000244769 TMF1P82094 1093 aa11.37□□□□□ -0.59
ATXN1-201ENST00000244769 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
ATXN1-201ENST00000244769 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
ATXN1-201ENST00000244769 TPM4P67936 248 aa11.36□□□□□ -0.59
ATXN1-201ENST00000244769 KIF3AQ9Y496 699 aa11.36□□□□□ -0.59
ATXN1-201ENST00000244769 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
ATXN1-201ENST00000244769 KIAA1211Q6ZU35 1233 aa11.35□□□□□ -0.59
ATXN1-201ENST00000244769 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
ATXN1-201ENST00000244769 G3V3G9 751 aa11.35□□□□□ -0.59
ATXN1-201ENST00000244769 DCAF8Q5TAQ9 597 aa11.35□□□□□ -0.59
ATXN1-201ENST00000244769 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
ATXN1-201ENST00000244769 GPATCH3Q96I76 525 aa11.35□□□□□ -0.59
ATXN1-201ENST00000244769 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
ATXN1-201ENST00000244769 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
ATXN1-201ENST00000244769 TIMELESSQ9UNS1 1208 aa11.34□□□□□ -0.59
ATXN1-201ENST00000244769 CEP89Q96ST8 783 aa11.33□□□□□ -0.6
ATXN1-201ENST00000244769 WIZO95785 1651 aa11.33□□□□□ -0.6
ATXN1-201ENST00000244769 HSP90AB1P08238 724 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms