RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 CARMIL1Q5VZK9 1371 aa26.81■■□□□ 1.88
SNX8-201ENST00000222990 SIN3AQ96ST3 1273 aa26.8■■□□□ 1.88
SNX8-201ENST00000222990 FHAD1B1AJZ9 1412 aa26.79■■□□□ 1.88
SNX8-201ENST00000222990 CUX2O14529 1486 aa26.78■■□□□ 1.88
SNX8-201ENST00000222990 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
SNX8-201ENST00000222990 KDM2AQ9Y2K7 1162 aa26.75■■□□□ 1.87
SNX8-201ENST00000222990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.74■■□□□ 1.87
SNX8-201ENST00000222990 KANK4Q5T7N3 995 aaPredicted RBP26.72■■□□□ 1.87
SNX8-201ENST00000222990 SALL2Q9Y467 1007 aaPredicted RBP26.69■■□□□ 1.86
SNX8-201ENST00000222990 CCDC136Q96JN2 1154 aa26.68■■□□□ 1.86
SNX8-201ENST00000222990 NPM2Q86SE8 214 aaKnown RBP26.66■■□□□ 1.86
SNX8-201ENST00000222990 IRX6P78412 446 aaPredicted RBP26.65■■□□□ 1.86
SNX8-201ENST00000222990 TIMELESSQ9UNS1 1208 aa26.65■■□□□ 1.86
SNX8-201ENST00000222990 PLEKHD1A6NEE1 506 aa26.64■■□□□ 1.85
SNX8-201ENST00000222990 NEFMP07197 916 aa26.63■■□□□ 1.85
SNX8-201ENST00000222990 CHGAP10645 457 aaKnown RBP26.61■■□□□ 1.85
SNX8-201ENST00000222990 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
SNX8-201ENST00000222990 ZBTB47Q9UFB7 747 aaPredicted RBP26.59■■□□□ 1.85
SNX8-201ENST00000222990 SETD5Q9C0A6 1442 aa26.58■■□□□ 1.85
SNX8-201ENST00000222990 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
SNX8-201ENST00000222990 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
SNX8-201ENST00000222990 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
SNX8-201ENST00000222990 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
SNX8-201ENST00000222990 NPM1P06748 294 aaKnown RBP eCLIP26.49■■□□□ 1.83
SNX8-201ENST00000222990 WDR43Q15061 677 aaKnown RBP eCLIP26.48■■□□□ 1.83
SNX8-201ENST00000222990 SUPT16HQ9Y5B9 1047 aaKnown RBP26.47■■□□□ 1.83
SNX8-201ENST00000222990 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
SNX8-201ENST00000222990 RAB3GAP2Q9H2M9 1393 aa26.46■■□□□ 1.83
SNX8-201ENST00000222990 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.43■■□□□ 1.82
SNX8-201ENST00000222990 RGL3Q3MIN7 710 aa26.41■■□□□ 1.82
SNX8-201ENST00000222990 CARD11Q9BXL7 1154 aa26.39■■□□□ 1.81
SNX8-201ENST00000222990 KCNH8Q96L42 1107 aa26.39■■□□□ 1.81
SNX8-201ENST00000222990 BCL11AQ9H165 835 aa26.37■■□□□ 1.81
SNX8-201ENST00000222990 CCER2I3L3R5 266 aa26.37■■□□□ 1.81
SNX8-201ENST00000222990 EIF4G1Q04637 1599 aaKnown RBP26.35■■□□□ 1.81
SNX8-201ENST00000222990 STAG3Q9UJ98 1225 aa26.33■■□□□ 1.81
SNX8-201ENST00000222990 FMN1Q68DA7 1419 aa26.33■■□□□ 1.8
SNX8-201ENST00000222990 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
SNX8-201ENST00000222990 UPF2Q9HAU5 1272 aaKnown RBP26.27■■□□□ 1.8
SNX8-201ENST00000222990 TDRD9Q8NDG6 1382 aaKnown RBP26.27■■□□□ 1.8
SNX8-201ENST00000222990 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
SNX8-201ENST00000222990 SLC24A1O60721 1099 aa26.25■■□□□ 1.79
SNX8-201ENST00000222990 PPP1R15AO75807 674 aaPredicted RBP26.25■■□□□ 1.79
SNX8-201ENST00000222990 SENP3-EIF4A1A0A087X0R7 540 aa26.24■■□□□ 1.79
SNX8-201ENST00000222990 NBR1Q14596 966 aa26.24■■□□□ 1.79
SNX8-201ENST00000222990 DHX57Q6P158 1386 aaKnown RBP26.24■■□□□ 1.79
SNX8-201ENST00000222990 PPP4R2Q9NY27 417 aa26.24■■□□□ 1.79
SNX8-201ENST00000222990 HSPA5P11021 654 aaKnown RBP26.23■■□□□ 1.79
SNX8-201ENST00000222990 CDCA8Q53HL2 280 aa26.19■■□□□ 1.78
SNX8-201ENST00000222990 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
SNX8-201ENST00000222990 FHOD3Q2V2M9 1422 aa26.18■■□□□ 1.78
SNX8-201ENST00000222990 ANP32EQ9BTT0 268 aa26.17■■□□□ 1.78
SNX8-201ENST00000222990 KNSTRNQ9Y448 316 aa26.17■■□□□ 1.78
SNX8-201ENST00000222990 ERCC6Q03468 1493 aa26.15■■□□□ 1.78
SNX8-201ENST00000222990 MPHOSPH9Q99550 1183 aa26.13■■□□□ 1.77
SNX8-201ENST00000222990 FOXD1Q16676 465 aa26.11■■□□□ 1.77
SNX8-201ENST00000222990 DCAF11Q8TEB1 546 aa26.11■■□□□ 1.77
SNX8-201ENST00000222990 HSP90AA1P07900 732 aaKnown RBP26.06■■□□□ 1.76
SNX8-201ENST00000222990 PKD2Q13563 968 aa26.06■■□□□ 1.76
SNX8-201ENST00000222990 B4GALNT3Q6L9W6 998 aa26.03■■□□□ 1.76
SNX8-201ENST00000222990 L3MBTL2Q969R5 705 aa25.97■■□□□ 1.75
SNX8-201ENST00000222990 DDRGK1Q96HY6 314 aa25.97■■□□□ 1.75
SNX8-201ENST00000222990 IGF1RP08069 1367 aa25.97■■□□□ 1.75
SNX8-201ENST00000222990 CC2D1BQ5T0F9 858 aaKnown RBP25.97■■□□□ 1.75
SNX8-201ENST00000222990 CARMIL2Q6F5E8 1435 aa25.96■■□□□ 1.75
SNX8-201ENST00000222990 TMF1P82094 1093 aa25.96■■□□□ 1.75
SNX8-201ENST00000222990 CFAP53Q96M91 514 aa25.95■■□□□ 1.75
SNX8-201ENST00000222990 KIF21BO75037 1637 aa25.94■■□□□ 1.74
SNX8-201ENST00000222990 FANCD2Q9BXW9 1451 aa25.93■■□□□ 1.74
SNX8-201ENST00000222990 ERICH6BQ5W0A0 696 aa25.91■■□□□ 1.74
SNX8-201ENST00000222990 RBM19Q9Y4C8 960 aaKnown RBP25.9■■□□□ 1.74
SNX8-201ENST00000222990 ANKRD30AQ9BXX3 1397 aa25.9■■□□□ 1.74
SNX8-201ENST00000222990 NUP155O75694 1391 aa25.89■■□□□ 1.74
SNX8-201ENST00000222990 SENP3Q9H4L4 574 aaPredicted RBP25.88■■□□□ 1.73
SNX8-201ENST00000222990 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
SNX8-201ENST00000222990 ANP32BQ92688 251 aaKnown RBP25.85■■□□□ 1.73
SNX8-201ENST00000222990 FGD5Q6ZNL6 1462 aa25.84■■□□□ 1.73
SNX8-201ENST00000222990 NCAPD3P42695 1498 aa25.84■■□□□ 1.73
SNX8-201ENST00000222990 NEUROD2Q15784 382 aa25.82■■□□□ 1.72
SNX8-201ENST00000222990 PLPPR3Q6T4P5 718 aa25.82■■□□□ 1.72
SNX8-201ENST00000222990 BECN1Q14457 450 aa25.81■■□□□ 1.72
SNX8-201ENST00000222990 TSHZ2Q9NRE2 1034 aa25.81■■□□□ 1.72
SNX8-201ENST00000222990 NOP58Q9Y2X3 529 aaKnown RBP25.8■■□□□ 1.72
SNX8-201ENST00000222990 MYH16Q9H6N6 1097 aa25.79■■□□□ 1.72
SNX8-201ENST00000222990 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
SNX8-201ENST00000222990 KTN1Q86UP2 1357 aaKnown RBP25.78■■□□□ 1.72
SNX8-201ENST00000222990 RALBP1Q15311 655 aa25.77■■□□□ 1.72
SNX8-201ENST00000222990 KANK1Q14678 1352 aa25.76■■□□□ 1.71
SNX8-201ENST00000222990 ROCK2O75116 1388 aaKnown RBP25.75■■□□□ 1.71
SNX8-201ENST00000222990 PPM1GO15355 546 aaPredicted RBP25.75■■□□□ 1.71
SNX8-201ENST00000222990 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
SNX8-201ENST00000222990 EIF5BO60841 1220 aaKnown RBP25.73■■□□□ 1.71
SNX8-201ENST00000222990 RGS3P49796 1198 aa25.72■■□□□ 1.71
SNX8-201ENST00000222990 PHLDB1Q86UU1 1377 aa25.72■■□□□ 1.71
SNX8-201ENST00000222990 TNNT2P45379 298 aaPredicted RBP25.72■■□□□ 1.71
SNX8-201ENST00000222990 NUDCQ9Y266 331 aa25.72■■□□□ 1.71
SNX8-201ENST00000222990 FTSJ3Q8IY81 847 aaKnown RBP25.71■■□□□ 1.71
SNX8-201ENST00000222990 ARAP1Q96P48 1450 aa25.7■■□□□ 1.71
SNX8-201ENST00000222990 LRRC9Q6ZRR7 1453 aa25.69■■□□□ 1.7
SNX8-201ENST00000222990 FRAT1Q92837 279 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms