RNA–Protein interactions for RNA: ENST00000022615.8

VDAC3-201, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VDAC3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-201ENST00000022615 TDRD9Q8NDG6 1382 aaKnown RBP11.24□□□□□ -0.61
VDAC3-201ENST00000022615 WIZO95785 1651 aa11.23□□□□□ -0.61
VDAC3-201ENST00000022615 POLA1P09884 1462 aaPredicted RBP11.22□□□□□ -0.61
VDAC3-201ENST00000022615 CEP170Q5SW79 1584 aa11.21□□□□□ -0.62
VDAC3-201ENST00000022615 WDR97A6NE52 1622 aa11.19□□□□□ -0.62
VDAC3-201ENST00000022615 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
VDAC3-201ENST00000022615 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
VDAC3-201ENST00000022615 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
VDAC3-201ENST00000022615 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
VDAC3-201ENST00000022615 SHROOM2Q13796 1616 aa11.15□□□□□ -0.63
VDAC3-201ENST00000022615 COL17A1Q9UMD9 1497 aaPredicted RBP11.13□□□□□ -0.63
VDAC3-201ENST00000022615 PPRC1Q5VV67 1664 aaKnown RBP11.12□□□□□ -0.63
VDAC3-201ENST00000022615 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
VDAC3-201ENST00000022615 SOGA1O94964 1423 aa11.11□□□□□ -0.63
VDAC3-201ENST00000022615 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
VDAC3-201ENST00000022615 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
VDAC3-201ENST00000022615 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
VDAC3-201ENST00000022615 PCF11O94913 1555 aaKnown RBP11.06□□□□□ -0.64
VDAC3-201ENST00000022615 NUP160Q12769 1436 aa11.06□□□□□ -0.64
VDAC3-201ENST00000022615 ADCY10Q96PN6 1610 aa11.06□□□□□ -0.64
VDAC3-201ENST00000022615 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
VDAC3-201ENST00000022615 GRIN2AQ12879 1464 aa11.02□□□□□ -0.65
VDAC3-201ENST00000022615 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.65
VDAC3-201ENST00000022615 PTPRMP28827 1452 aa11□□□□□ -0.65
VDAC3-201ENST00000022615 PRG4Q92954 1404 aaPredicted RBP10.99□□□□□ -0.65
VDAC3-201ENST00000022615 GLI2P10070 1586 aa10.98□□□□□ -0.65
VDAC3-201ENST00000022615 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
VDAC3-201ENST00000022615 FGD5Q6ZNL6 1462 aa10.97□□□□□ -0.65
VDAC3-201ENST00000022615 ADAMTSL3P82987 1691 aa10.93□□□□□ -0.66
VDAC3-201ENST00000022615 KIF21BO75037 1637 aa10.92□□□□□ -0.66
VDAC3-201ENST00000022615 HSPA2P54652 639 aa10.91□□□□□ -0.66
VDAC3-201ENST00000022615 CCDC88BA6NC98 1476 aa10.9□□□□□ -0.66
VDAC3-201ENST00000022615 ABCA5Q8WWZ7 1642 aa10.9□□□□□ -0.66
VDAC3-201ENST00000022615 MSH5O43196 834 aa10.9□□□□□ -0.67
VDAC3-201ENST00000022615 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
VDAC3-201ENST00000022615 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
VDAC3-201ENST00000022615 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
VDAC3-201ENST00000022615 TEX14Q8IWB6 1497 aa10.87□□□□□ -0.67
VDAC3-201ENST00000022615 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
VDAC3-201ENST00000022615 PLB1Q6P1J6 1458 aa10.84□□□□□ -0.67
VDAC3-201ENST00000022615 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
VDAC3-201ENST00000022615 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
VDAC3-201ENST00000022615 CUX1P39880 1505 aa10.81□□□□□ -0.68
VDAC3-201ENST00000022615 ABCA10Q8WWZ4 1543 aa10.81□□□□□ -0.68
VDAC3-201ENST00000022615 MADDQ8WXG6 1647 aa10.8□□□□□ -0.68
VDAC3-201ENST00000022615 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
VDAC3-201ENST00000022615 KIAA0586Q9BVV6 1533 aa10.79□□□□□ -0.68
VDAC3-201ENST00000022615 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
VDAC3-201ENST00000022615 ABCC2Q92887 1545 aa10.78□□□□□ -0.68
VDAC3-201ENST00000022615 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.68
VDAC3-201ENST00000022615 IQSEC2Q5JU85 1478 aa10.77□□□□□ -0.68
VDAC3-201ENST00000022615 RUSC2Q8N2Y8 1516 aa10.77□□□□□ -0.69
VDAC3-201ENST00000022615 BCORL1Q5H9F3 1711 aa10.77□□□□□ -0.69
VDAC3-201ENST00000022615 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
VDAC3-201ENST00000022615 LTBP4Q8N2S1 1624 aa10.73□□□□□ -0.69
VDAC3-201ENST00000022615 CUL7Q14999 1698 aa10.72□□□□□ -0.69
VDAC3-201ENST00000022615 STRCQ7RTU9 1775 aa10.72□□□□□ -0.69
VDAC3-201ENST00000022615 RIMS1Q86UR5 1692 aaKnown RBP10.71□□□□□ -0.69
VDAC3-201ENST00000022615 YEATS2Q9ULM3 1422 aa10.7□□□□□ -0.7
VDAC3-201ENST00000022615 SRCAPQ6ZRS2 3230 aa10.7□□□□□ -0.7
VDAC3-201ENST00000022615 MAGI3Q5TCQ9 1506 aa10.68□□□□□ -0.7
VDAC3-201ENST00000022615 DMRT2Q9Y5R5 561 aa10.67□□□□□ -0.7
VDAC3-201ENST00000022615 PTPRGP23470 1445 aa10.66□□□□□ -0.7
VDAC3-201ENST00000022615 UHRF1BP1LA0JNW5 1464 aa10.65□□□□□ -0.7
VDAC3-201ENST00000022615 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
VDAC3-201ENST00000022615 ARAP3Q8WWN8 1544 aa10.63□□□□□ -0.71
VDAC3-201ENST00000022615 PTPRTO14522 1441 aa10.63□□□□□ -0.71
VDAC3-201ENST00000022615 KDM5BQ9UGL1 1544 aa10.61□□□□□ -0.71
VDAC3-201ENST00000022615 UBAP1LF5GYI3 381 aa10.61□□□□□ -0.71
VDAC3-201ENST00000022615 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
VDAC3-201ENST00000022615 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
VDAC3-201ENST00000022615 CD109Q6YHK3 1445 aa10.59□□□□□ -0.71
VDAC3-201ENST00000022615 HSPA1LP34931 641 aa10.59□□□□□ -0.71
VDAC3-201ENST00000022615 PREX1Q8TCU6 1659 aa10.58□□□□□ -0.72
VDAC3-201ENST00000022615 ARID4BQ4LE39 1312 aaPredicted RBP10.57□□□□□ -0.72
VDAC3-201ENST00000022615 ZCCHC11Q5TAX3 1644 aaKnown RBP10.57□□□□□ -0.72
VDAC3-201ENST00000022615 WDR7Q9Y4E6 1490 aa10.56□□□□□ -0.72
VDAC3-201ENST00000022615 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
VDAC3-201ENST00000022615 TNIKQ9UKE5 1360 aa10.55□□□□□ -0.72
VDAC3-201ENST00000022615 RGS17Q9UGC6 210 aaPredicted RBP10.54□□□□□ -0.72
VDAC3-201ENST00000022615 TTC37Q6PGP7 1564 aa10.54□□□□□ -0.72
VDAC3-201ENST00000022615 TTBK1Q5TCY1 1321 aaPredicted RBP10.54□□□□□ -0.72
VDAC3-201ENST00000022615 ZBTB22O15209 634 aa10.53□□□□□ -0.72
VDAC3-201ENST00000022615 MAPK8IP2Q13387 824 aaPredicted RBP10.52□□□□□ -0.72
VDAC3-201ENST00000022615 FRMPD1Q5SYB0 1578 aa10.5□□□□□ -0.73
VDAC3-201ENST00000022615 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
VDAC3-201ENST00000022615 RAPGEF3O95398 923 aa10.49□□□□□ -0.73
VDAC3-201ENST00000022615 ARHGEF40Q8TER5 1519 aa10.48□□□□□ -0.73
VDAC3-201ENST00000022615 SIGLEC1Q9BZZ2 1709 aa10.47□□□□□ -0.73
VDAC3-201ENST00000022615 FER1L4A9Z1Z3 1794 aa10.46□□□□□ -0.73
VDAC3-201ENST00000022615 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.74
VDAC3-201ENST00000022615 RNF216Q9NWF9 866 aaPredicted RBP10.46□□□□□ -0.74
VDAC3-201ENST00000022615 PHLDB1Q86UU1 1377 aa10.45□□□□□ -0.74
VDAC3-201ENST00000022615 UHRF1BP1Q6BDS2 1440 aa10.45□□□□□ -0.74
VDAC3-201ENST00000022615 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
VDAC3-201ENST00000022615 POGZQ7Z3K3 1410 aa10.44□□□□□ -0.74
VDAC3-201ENST00000022615 SETD1AO15047 1707 aaKnown RBP10.43□□□□□ -0.74
VDAC3-201ENST00000022615 ZNF335Q9H4Z2 1342 aaPredicted RBP10.43□□□□□ -0.74
VDAC3-201ENST00000022615 NCOA1Q15788 1441 aa10.42□□□□□ -0.74
VDAC3-201ENST00000022615 FANCAO15360 1455 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 264.6 ms