RNA–Protein interactions for RNA: ENST00000022615.8

VDAC3-201, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VDAC3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-201ENST00000022615 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
VDAC3-201ENST00000022615 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
VDAC3-201ENST00000022615 DNAJC5BQ9UF47 199 aa15□□□□□ -0.01
VDAC3-201ENST00000022615 ABCC9O60706 1549 aa14.86□□□□□ -0.03
VDAC3-201ENST00000022615 NISCHQ9Y2I1 1504 aa14.86□□□□□ -0.03
VDAC3-201ENST00000022615 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
VDAC3-201ENST00000022615 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
VDAC3-201ENST00000022615 RB1CC1Q8TDY2 1594 aa13.65□□□□□ -0.22
VDAC3-201ENST00000022615 PABPN1Q86U42 306 aaKnown RBP eCLIP13.65□□□□□ -0.22
VDAC3-201ENST00000022615 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
VDAC3-201ENST00000022615 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
VDAC3-201ENST00000022615 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
VDAC3-201ENST00000022615 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
VDAC3-201ENST00000022615 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
VDAC3-201ENST00000022615 TRIM41Q8WV44 630 aa13.36□□□□□ -0.27
VDAC3-201ENST00000022615 NACADO15069 1562 aa13.31□□□□□ -0.28
VDAC3-201ENST00000022615 CUX2O14529 1486 aa13.29□□□□□ -0.28
VDAC3-201ENST00000022615 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
VDAC3-201ENST00000022615 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
VDAC3-201ENST00000022615 SENP3Q9H4L4 574 aaPredicted RBP12.94□□□□□ -0.34
VDAC3-201ENST00000022615 DCAF8L2P0C7V8 631 aa12.87□□□□□ -0.35
VDAC3-201ENST00000022615 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
VDAC3-201ENST00000022615 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
VDAC3-201ENST00000022615 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
VDAC3-201ENST00000022615 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
VDAC3-201ENST00000022615 PLPPR3Q6T4P5 718 aa12.6□□□□□ -0.39
VDAC3-201ENST00000022615 SCRIBQ14160 1630 aa12.54□□□□□ -0.4
VDAC3-201ENST00000022615 NESP48681 1621 aa12.48□□□□□ -0.41
VDAC3-201ENST00000022615 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.41
VDAC3-201ENST00000022615 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.41
VDAC3-201ENST00000022615 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.41
VDAC3-201ENST00000022615 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
VDAC3-201ENST00000022615 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
VDAC3-201ENST00000022615 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
VDAC3-201ENST00000022615 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
VDAC3-201ENST00000022615 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
VDAC3-201ENST00000022615 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
VDAC3-201ENST00000022615 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.44
VDAC3-201ENST00000022615 DCAF1Q9Y4B6 1507 aa12.23□□□□□ -0.45
VDAC3-201ENST00000022615 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
VDAC3-201ENST00000022615 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
VDAC3-201ENST00000022615 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
VDAC3-201ENST00000022615 WDR62O43379 1518 aa12.16□□□□□ -0.46
VDAC3-201ENST00000022615 PDS5BQ9NTI5 1447 aa12.14□□□□□ -0.47
VDAC3-201ENST00000022615 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
VDAC3-201ENST00000022615 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
VDAC3-201ENST00000022615 MRC2Q9UBG0 1479 aa12.13□□□□□ -0.47
VDAC3-201ENST00000022615 ATAD2BQ9ULI0 1458 aa12.13□□□□□ -0.47
VDAC3-201ENST00000022615 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
VDAC3-201ENST00000022615 FOXD1Q16676 465 aa11.92□□□□□ -0.5
VDAC3-201ENST00000022615 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
VDAC3-201ENST00000022615 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
VDAC3-201ENST00000022615 RSF1Q96T23 1441 aaPredicted RBP11.88□□□□□ -0.51
VDAC3-201ENST00000022615 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
VDAC3-201ENST00000022615 CADPSQ9ULU8 1353 aa11.87□□□□□ -0.51
VDAC3-201ENST00000022615 SOCS7O14512 581 aa11.86□□□□□ -0.51
VDAC3-201ENST00000022615 FBXO41Q8TF61 875 aa11.85□□□□□ -0.51
VDAC3-201ENST00000022615 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
VDAC3-201ENST00000022615 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
VDAC3-201ENST00000022615 ERCC6L2Q5T890 1561 aa11.82□□□□□ -0.52
VDAC3-201ENST00000022615 ZNF608Q9ULD9 1512 aaPredicted RBP11.78□□□□□ -0.52
VDAC3-201ENST00000022615 ILDR2Q71H61 639 aa11.77□□□□□ -0.53
VDAC3-201ENST00000022615 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
VDAC3-201ENST00000022615 CHD1O14646 1710 aa11.75□□□□□ -0.53
VDAC3-201ENST00000022615 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
VDAC3-201ENST00000022615 ADRA2BP18089 450 aa11.74□□□□□ -0.53
VDAC3-201ENST00000022615 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
VDAC3-201ENST00000022615 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
VDAC3-201ENST00000022615 HECW2Q9P2P5 1572 aa11.71□□□□□ -0.53
VDAC3-201ENST00000022615 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
VDAC3-201ENST00000022615 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
VDAC3-201ENST00000022615 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
VDAC3-201ENST00000022615 KIF13AQ9H1H9 1805 aa11.62□□□□□ -0.55
VDAC3-201ENST00000022615 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
VDAC3-201ENST00000022615 GAPVD1Q14C86 1478 aa11.56□□□□□ -0.56
VDAC3-201ENST00000022615 DISP3Q9P2K9 1392 aa11.56□□□□□ -0.56
VDAC3-201ENST00000022615 FBLN2P98095 1184 aa11.55□□□□□ -0.56
VDAC3-201ENST00000022615 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
VDAC3-201ENST00000022615 CFTRP13569 1480 aa11.53□□□□□ -0.56
VDAC3-201ENST00000022615 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
VDAC3-201ENST00000022615 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.576e-7■■■■□ 21.5
VDAC3-201ENST00000022615 KDM6BO15054 1643 aa11.47□□□□□ -0.57
VDAC3-201ENST00000022615 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
VDAC3-201ENST00000022615 KCNA4P22459 653 aa11.46□□□□□ -0.57
VDAC3-201ENST00000022615 MROH2BQ7Z745 1585 aa11.44□□□□□ -0.58
VDAC3-201ENST00000022615 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
VDAC3-201ENST00000022615 TOPBP1Q92547 1522 aa11.4□□□□□ -0.58
VDAC3-201ENST00000022615 ABCC10Q5T3U5 1492 aa11.38□□□□□ -0.59
VDAC3-201ENST00000022615 SPATA31D1Q6ZQQ2 1576 aa11.37□□□□□ -0.59
VDAC3-201ENST00000022615 FAM69CQ0P6D2 419 aa11.36□□□□□ -0.59
VDAC3-201ENST00000022615 SNAPC4Q5SXM2 1469 aa11.35□□□□□ -0.59
VDAC3-201ENST00000022615 PIAS4Q8N2W9 510 aaPredicted RBP11.34□□□□□ -0.59
VDAC3-201ENST00000022615 DIP2BQ9P265 1576 aa11.33□□□□□ -0.6
VDAC3-201ENST00000022615 CHMP7Q8WUX9 453 aaPredicted RBP11.31□□□□□ -0.6
VDAC3-201ENST00000022615 PRDM2Q13029 1718 aa11.3□□□□□ -0.6
VDAC3-201ENST00000022615 MAGI1Q96QZ7 1491 aaPredicted RBP11.28□□□□□ -0.6
VDAC3-201ENST00000022615 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
VDAC3-201ENST00000022615 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
VDAC3-201ENST00000022615 TSPOAP1O95153 1857 aa11.24□□□□□ -0.61
VDAC3-201ENST00000022615 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms