RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Lrriq1Q0P5X1 1673 aa31.78■■■□□ 2.68
Trim27-207ENSMUST00000223065 Tiam1Q60610 1591 aa31.76■■■□□ 2.67
Trim27-207ENSMUST00000223065 Samd9lQ69Z37 1561 aa31.72■■■□□ 2.67
Trim27-207ENSMUST00000223065 SynmQ70IV5 1561 aa31.71■■■□□ 2.67
Trim27-207ENSMUST00000223065 Naip1Q9QWK5 1403 aa31.68■■■□□ 2.66
Trim27-207ENSMUST00000223065 Cux1P53564 1515 aa31.67■■■□□ 2.66
Trim27-207ENSMUST00000223065 Pcf11G3X9Z4 1553 aa31.65■■■□□ 2.66
Trim27-207ENSMUST00000223065 Lmo7E9PYF4 1699 aaKnown RBP31.63■■■□□ 2.65
Trim27-207ENSMUST00000223065 Crocc2F6XLV1 1638 aa31.63■■■□□ 2.65
Trim27-207ENSMUST00000223065 BlmO88700 1416 aa31.56■■■□□ 2.64
Trim27-207ENSMUST00000223065 Rad54l2Q99NG0 1466 aa31.56■■■□□ 2.64
Trim27-207ENSMUST00000223065 Urb2E9Q7L1 1524 aaKnown RBP31.55■■■□□ 2.64
Trim27-207ENSMUST00000223065 CntlnA2AM05 1397 aa31.54■■■□□ 2.64
Trim27-207ENSMUST00000223065 Fyco1Q8VDC1 1437 aa31.54■■■□□ 2.64
Trim27-207ENSMUST00000223065 Polr1aO35134 1717 aaKnown RBP31.53■■■□□ 2.64
Trim27-207ENSMUST00000223065 Slx4Q6P1D7 1565 aa31.53■■■□□ 2.64
Trim27-207ENSMUST00000223065 Rpap1Q80TE0 1409 aa31.5■■■□□ 2.63
Trim27-207ENSMUST00000223065 Las1lA2BE28 776 aaKnown RBP31.42■■■□□ 2.62
Trim27-207ENSMUST00000223065 Peg3Q3URU2 1571 aa31.4■■■□□ 2.62
Trim27-207ENSMUST00000223065 Kdm5bQ80Y84 1544 aa31.37■■■□□ 2.61
Trim27-207ENSMUST00000223065 Aebp1Q640N1 1128 aa31.37■■■□□ 2.61
Trim27-207ENSMUST00000223065 TchhA0A0B4J1F9 1599 aa31.37■■■□□ 2.61
Trim27-207ENSMUST00000223065 Pla2r1Q62028 1487 aa31.37■■■□□ 2.61
Trim27-207ENSMUST00000223065 EprsQ8CGC7 1512 aaKnown RBP31.34■■■□□ 2.61
Trim27-207ENSMUST00000223065 Plb1Q3TTY0 1478 aa31.34■■■□□ 2.61
Trim27-207ENSMUST00000223065 Magi3Q9EQJ9 1476 aa31.33■■■□□ 2.61
Trim27-207ENSMUST00000223065 TonslQ6NZL6 1363 aa31.31■■■□□ 2.6
Trim27-207ENSMUST00000223065 Lmod2Q3UHZ5 550 aa31.28■■■□□ 2.6
Trim27-207ENSMUST00000223065 Sall2Q9QX96 1004 aa31.28■■■□□ 2.6
Trim27-207ENSMUST00000223065 Eif4g3Q80XI3 1579 aaKnown RBP31.27■■■□□ 2.6
Trim27-207ENSMUST00000223065 Grin2aP35436 1464 aa31.25■■■□□ 2.59
Trim27-207ENSMUST00000223065 Disp1Q3TDN0 1521 aa31.25■■■□□ 2.59
Trim27-207ENSMUST00000223065 CadpsQ80TJ1 1355 aa31.22■■■□□ 2.59
Trim27-207ENSMUST00000223065 Gm1043A0A140LJC2 1431 aa31.22■■■□□ 2.59
Trim27-207ENSMUST00000223065 Abca5Q8K448 1642 aa31.17■■■□□ 2.58
Trim27-207ENSMUST00000223065 Aebp2Q9Z248 504 aaKnown RBP31.15■■■□□ 2.58
Trim27-207ENSMUST00000223065 3425401B19RikD3Z1D3 1412 aa31.15■■■□□ 2.58
Trim27-207ENSMUST00000223065 Gm7298A0A0N4SVU1 1476 aa31.15■■■□□ 2.58
Trim27-207ENSMUST00000223065 Gpatch8A2A6A1 1505 aa31.12■■■□□ 2.57
Trim27-207ENSMUST00000223065 Adamts12Q811B3 1600 aa31.11■■■□□ 2.57
Trim27-207ENSMUST00000223065 Ift140E9PY46 1464 aa31.08■■■□□ 2.57
Trim27-207ENSMUST00000223065 Setd1bQ8CFT2 1985 aa31.07■■■□□ 2.57
Trim27-207ENSMUST00000223065 WizO88286 1684 aaKnown RBP31.07■■■□□ 2.56
Trim27-207ENSMUST00000223065 Wdr66E9Q743 1299 aa31.05■■■□□ 2.56
Trim27-207ENSMUST00000223065 Soga1E1U8D0 1418 aa31.02■■■□□ 2.56
Trim27-207ENSMUST00000223065 Fam50aQ9WV03 339 aaKnown RBP31.02■■■□□ 2.56
Trim27-207ENSMUST00000223065 Nup160Q9Z0W3 1402 aaKnown RBP31.01■■■□□ 2.56
Trim27-207ENSMUST00000223065 Pbrm1Q8BSQ9 1634 aaKnown RBP31.01■■■□□ 2.55
Trim27-207ENSMUST00000223065 ClspnQ80YR7 1315 aa30.97■■■□□ 2.55
Trim27-207ENSMUST00000223065 Kif27Q7M6Z4 1394 aa30.97■■■□□ 2.55
Trim27-207ENSMUST00000223065 Eid3Q3V124 375 aa30.97■■■□□ 2.55
Trim27-207ENSMUST00000223065 Mia2Q91ZV0 1396 aa30.96■■■□□ 2.55
Trim27-207ENSMUST00000223065 Fhad1A6PWD2 1420 aa30.94■■■□□ 2.54
Trim27-207ENSMUST00000223065 Lmtk2Q3TYD6 1471 aa30.94■■■□□ 2.54
Trim27-207ENSMUST00000223065 PxdnQ3UQ28 1475 aa30.93■■■□□ 2.54
Trim27-207ENSMUST00000223065 Naip2Q9QUK4 1447 aa30.89■■■□□ 2.54
Trim27-207ENSMUST00000223065 Ccnb3Q810T2 1396 aa30.89■■■□□ 2.53
Trim27-207ENSMUST00000223065 Abca16E9PWJ7 1678 aa30.88■■■□□ 2.53
Trim27-207ENSMUST00000223065 Vps8Q0P5W1 1427 aa30.85■■■□□ 2.53
Trim27-207ENSMUST00000223065 Rusc2Q80U22 1514 aa30.85■■■□□ 2.53
Trim27-207ENSMUST00000223065 Ccer2J3QPU5 274 aa30.84■■■□□ 2.53
Trim27-207ENSMUST00000223065 A2mQ6GQT1 1474 aa30.83■■■□□ 2.53
Trim27-207ENSMUST00000223065 Cc2d2bA0A286YDU8 1405 aa30.82■■■□□ 2.52
Trim27-207ENSMUST00000223065 WrnO09053 1401 aa30.78■■■□□ 2.52
Trim27-207ENSMUST00000223065 BC005561E9Q5E2 1589 aa30.77■■■□□ 2.52
Trim27-207ENSMUST00000223065 Gcc2Q8CHG3 1679 aa30.75■■■□□ 2.51
Trim27-207ENSMUST00000223065 NexmifQ5DTT1 1515 aa30.75■■■□□ 2.51
Trim27-207ENSMUST00000223065 Ankrd36D3Z4K0 1415 aa30.73■■■□□ 2.51
Trim27-207ENSMUST00000223065 Shroom2A2ALU4 1481 aa30.72■■■□□ 2.51
Trim27-207ENSMUST00000223065 Arhgap27A2AB59 869 aa30.71■■■□□ 2.51
Trim27-207ENSMUST00000223065 Abcc2Q8VI47 1543 aa30.7■■■□□ 2.51
Trim27-207ENSMUST00000223065 Rapgef6Q5NCJ1 1609 aa30.65■■■□□ 2.5
Trim27-207ENSMUST00000223065 Mug1P28665 1476 aa30.65■■■□□ 2.5
Trim27-207ENSMUST00000223065 UacaQ8CGB3 1411 aa30.64■■■□□ 2.49
Trim27-207ENSMUST00000223065 Dnajc5P60904 198 aa30.63■■■□□ 2.49
Trim27-207ENSMUST00000223065 Ncoa3O09000 1398 aa30.62■■■□□ 2.49
Trim27-207ENSMUST00000223065 Neurod1Q60867 357 aa30.6■■■□□ 2.49
Trim27-207ENSMUST00000223065 Ppargc1bQ8VHJ7 1014 aa30.59■■■□□ 2.49
Trim27-207ENSMUST00000223065 Dennd4bQ3U1Y4 1499 aa30.59■■■□□ 2.49
Trim27-207ENSMUST00000223065 Chic2Q9D9G3 165 aa30.58■■■□□ 2.49
Trim27-207ENSMUST00000223065 Arhgef11Q68FM7 1552 aa30.52■■■□□ 2.48
Trim27-207ENSMUST00000223065 Fhod3Q76LL6 1578 aa30.49■■■□□ 2.47
Trim27-207ENSMUST00000223065 Pabpn1Q8CCS6 302 aaKnown RBP30.48■■■□□ 2.47
Trim27-207ENSMUST00000223065 Rfx7F8VPJ6 1459 aa30.48■■■□□ 2.47
Trim27-207ENSMUST00000223065 Hspa5P20029 655 aaKnown RBP30.47■■■□□ 2.47
Trim27-207ENSMUST00000223065 Arhgap31A6X8Z5 1425 aa30.46■■■□□ 2.47
Trim27-207ENSMUST00000223065 Cdc42bpaQ3UU96 1719 aa30.45■■■□□ 2.47
Trim27-207ENSMUST00000223065 Abcc5Q9R1X5 1436 aa30.44■■■□□ 2.46
Trim27-207ENSMUST00000223065 Kiaa1551Q5DTW7 1521 aa30.44■■■□□ 2.46
Trim27-207ENSMUST00000223065 Map3k4O08648 1597 aa30.43■■■□□ 2.46
Trim27-207ENSMUST00000223065 Ube2uB1AUC4 352 aa30.42■■■□□ 2.46
Trim27-207ENSMUST00000223065 Pelp1Q9DBD5 1123 aaKnown RBP30.42■■■□□ 2.46
Trim27-207ENSMUST00000223065 Arhgef40Q3UPH7 1517 aa30.42■■■□□ 2.46
Trim27-207ENSMUST00000223065 Ncoa2Q61026 1462 aa30.41■■■□□ 2.46
Trim27-207ENSMUST00000223065 Cabp1Q9JLK7 227 aa30.4■■■□□ 2.46
Trim27-207ENSMUST00000223065 Cul7Q8VE73 1689 aa30.4■■■□□ 2.46
Trim27-207ENSMUST00000223065 Dhx57Q6P5D3 1388 aaKnown RBP30.38■■■□□ 2.45
Trim27-207ENSMUST00000223065 Plekhh2Q8C115 1491 aa30.38■■■□□ 2.45
Trim27-207ENSMUST00000223065 Dnmt1P13864 1620 aaKnown RBP30.37■■■□□ 2.45
Trim27-207ENSMUST00000223065 Nop58Q6DFW4 536 aaKnown RBP30.37■■■□□ 2.45
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms