RNA–Protein interactions for RNA: ENSMUST00000220169.1

Gm38560-201, mousemouse

TSL 3 BASIC

Gene Gm38560, Length 646 nt, Biotype bidirectional promoter lncRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm38560-201ENSMUST00000220169 Gm45233A0A0N4SVE0 221 aa14.71□□□□□ -0.05
Gm38560-201ENSMUST00000220169 Pde4dQ01063 747 aa14.71□□□□□ -0.05
Gm38560-201ENSMUST00000220169 Atad2Q8CDM1 1040 aa14.69□□□□□ -0.06
Gm38560-201ENSMUST00000220169 Gm13697A2AK42 830 aa14.65□□□□□ -0.06
Gm38560-201ENSMUST00000220169 Pdap1Q3UHX2 181 aaKnown RBP14.65□□□□□ -0.06
Gm38560-201ENSMUST00000220169 Ube2uB1AUC4 352 aa14.61□□□□□ -0.07
Gm38560-201ENSMUST00000220169 Repin1Q5U4E2 545 aa14.59□□□□□ -0.07
Gm38560-201ENSMUST00000220169 Fam117bQ3U3E2 584 aa14.57□□□□□ -0.08
Gm38560-201ENSMUST00000220169 Dcbld2Q91ZV3 769 aa14.56□□□□□ -0.08
Gm38560-201ENSMUST00000220169 Znf516Q7TSH3 1157 aa14.54□□□□□ -0.08
Gm38560-201ENSMUST00000220169 Tulp1Q9Z273 543 aa14.49□□□□□ -0.09
Gm38560-201ENSMUST00000220169 Ndufv2Q9D6J6 248 aa14.48□□□□□ -0.09
Gm38560-201ENSMUST00000220169 ZxdbA2CE44 873 aa14.47□□□□□ -0.09
Gm38560-201ENSMUST00000220169 Arhgef1Q61210 920 aaKnown RBP14.47□□□□□ -0.09
Gm38560-201ENSMUST00000220169 Krtap4-1Q3UUY3 169 aa14.46□□□□□ -0.09
Gm38560-201ENSMUST00000220169 Pak3Q61036 559 aa14.4□□□□□ -0.1
Gm38560-201ENSMUST00000220169 Kank4Q6P9J5 1016 aa14.39□□□□□ -0.11
Gm38560-201ENSMUST00000220169 Znf579Q80VM4 562 aa14.39□□□□□ -0.11
Gm38560-201ENSMUST00000220169 Bclaf1Q8K019 919 aaKnown RBP14.35□□□□□ -0.11
Gm38560-201ENSMUST00000220169 Prim1P20664 417 aa14.32□□□□□ -0.12
Gm38560-201ENSMUST00000220169 C1qbpO35658 278 aa14.27□□□□□ -0.13
Gm38560-201ENSMUST00000220169 Fam181bQ80VF6 417 aa14.27□□□□□ -0.13
Gm38560-201ENSMUST00000220169 St18Q80TY4 1045 aa14.24□□□□□ -0.13
Gm38560-201ENSMUST00000220169 Jph4Q80WT0 628 aa14.23□□□□□ -0.13
Gm38560-201ENSMUST00000220169 Spock2Q9ER58 423 aa14.21□□□□□ -0.13
Gm38560-201ENSMUST00000220169 Chrm1P12657 460 aa14.18□□□□□ -0.14
Gm38560-201ENSMUST00000220169 Pcdhb17Q91VD8 799 aa14.14□□□□□ -0.15
Gm38560-201ENSMUST00000220169 Pelp1Q9DBD5 1123 aaKnown RBP14.07□□□□□ -0.16
Gm38560-201ENSMUST00000220169 Hmx1O70218 332 aa14.06□□□□□ -0.16
Gm38560-201ENSMUST00000220169 Axin1O35625 863 aa14.03□□□□□ -0.16
Gm38560-201ENSMUST00000220169 Ecm2Q5FW85 670 aa14.03□□□□□ -0.16
Gm38560-201ENSMUST00000220169 Scarf1Q5ND28 820 aa14.03□□□□□ -0.16
Gm38560-201ENSMUST00000220169 Ferd3lQ923Z4 168 aa14.03□□□□□ -0.16
Gm38560-201ENSMUST00000220169 Fndc3aQ8BX90 1198 aa14.02□□□□□ -0.17
Gm38560-201ENSMUST00000220169 Evi5P97366 809 aa13.98□□□□□ -0.17
Gm38560-201ENSMUST00000220169 EdaraddQ8VHX2 208 aa13.97□□□□□ -0.17
Gm38560-201ENSMUST00000220169 Msh5Q9QUM7 833 aa13.97□□□□□ -0.17
Gm38560-201ENSMUST00000220169 Dkk1O54908 272 aa13.96□□□□□ -0.17
Gm38560-201ENSMUST00000220169 Scnn1bQ9WU38 638 aa13.95□□□□□ -0.18
Gm38560-201ENSMUST00000220169 Pcdh10E9PXQ7 1057 aa13.89□□□□□ -0.19
Gm38560-201ENSMUST00000220169 Ier5lQ99J55 406 aa13.87□□□□□ -0.19
Gm38560-201ENSMUST00000220169 PsdQ5DTT2 1024 aa13.86□□□□□ -0.19
Gm38560-201ENSMUST00000220169 TimelessQ9R1X4 1197 aa13.86□□□□□ -0.19
Gm38560-201ENSMUST00000220169 Lce6aD3YV94 81 aa13.85□□□□□ -0.19
Gm38560-201ENSMUST00000220169 Actn4P57780 912 aaKnown RBP13.85□□□□□ -0.19
Gm38560-201ENSMUST00000220169 Ppp6r1Q7TSI3 856 aa13.85□□□□□ -0.19
Gm38560-201ENSMUST00000220169 Nap1l5Q9JJF0 156 aa13.85□□□□□ -0.19
Gm38560-201ENSMUST00000220169 Irx5Q9JKQ4 484 aa13.82□□□□□ -0.2
Gm38560-201ENSMUST00000220169 Fkbp4P30416 458 aa13.81□□□□□ -0.2
Gm38560-201ENSMUST00000220169 E9Q0B3 247 aa13.8□□□□□ -0.2
Gm38560-201ENSMUST00000220169 Adnp2Q8CHC8 1165 aaKnown RBP13.76□□□□□ -0.21
Gm38560-201ENSMUST00000220169 Stk3Q9JI10 497 aa13.71□□□□□ -0.21
Gm38560-201ENSMUST00000220169 Ankrd65F6YK91 380 aa13.7□□□□□ -0.22
Gm38560-201ENSMUST00000220169 Zbtb22Q9Z0G7 638 aa13.69□□□□□ -0.22
Gm38560-201ENSMUST00000220169 ElnP54320 860 aa13.68□□□□□ -0.22
Gm38560-201ENSMUST00000220169 Apba1B2RUJ5 842 aa13.66□□□□□ -0.22
Gm38560-201ENSMUST00000220169 Sall2Q9QX96 1004 aa13.65□□□□□ -0.22
Gm38560-201ENSMUST00000220169 Thap8E9Q695 213 aa13.64□□□□□ -0.23
Gm38560-201ENSMUST00000220169 Gga1Q8R0H9 635 aa13.64□□□□□ -0.23
Gm38560-201ENSMUST00000220169 Tox2A2A472 547 aa13.59□□□□□ -0.23
Gm38560-201ENSMUST00000220169 Otop3Q80UF9 577 aa13.59□□□□□ -0.23
Gm38560-201ENSMUST00000220169 Dnm1lQ8K1M6 742 aa13.59□□□□□ -0.23
Gm38560-201ENSMUST00000220169 Pdzrn4E9PUZ9 1014 aa13.58□□□□□ -0.24
Gm38560-201ENSMUST00000220169 Kdm2aP59997 1161 aa13.58□□□□□ -0.24
Gm38560-201ENSMUST00000220169 RragcQ99K70 398 aa13.57□□□□□ -0.24
Gm38560-201ENSMUST00000220169 Neurod1Q60867 357 aa13.55□□□□□ -0.24
Gm38560-201ENSMUST00000220169 Rsph6aQ8CDR2 708 aa13.54□□□□□ -0.24
Gm38560-201ENSMUST00000220169 Stk24Q99KH8 431 aa13.53□□□□□ -0.24
Gm38560-201ENSMUST00000220169 Smpd1Q04519 627 aa13.49□□□□□ -0.25
Gm38560-201ENSMUST00000220169 Mier1Q5UAK0 511 aa13.49□□□□□ -0.25
Gm38560-201ENSMUST00000220169 Stk25Q9Z2W1 426 aa13.48□□□□□ -0.25
Gm38560-201ENSMUST00000220169 Gm11563B1AQ90 168 aa13.47□□□□□ -0.25
Gm38560-201ENSMUST00000220169 Rgl2Q61193 778 aa13.47□□□□□ -0.25
Gm38560-201ENSMUST00000220169 Krtap4-7Q9D732 168 aa13.47□□□□□ -0.25
Gm38560-201ENSMUST00000220169 Sptlc1O35704 473 aa13.45□□□□□ -0.26
Gm38560-201ENSMUST00000220169 Rnf166Q3U9F6 237 aa13.45□□□□□ -0.26
Gm38560-201ENSMUST00000220169 Hoxa2P31245 372 aa13.43□□□□□ -0.26
Gm38560-201ENSMUST00000220169 Setdb2Q8C267 713 aa13.43□□□□□ -0.26
Gm38560-201ENSMUST00000220169 Slc4a2P13808 1237 aaKnown RBP13.42□□□□□ -0.26
Gm38560-201ENSMUST00000220169 Erich4Q3UNU4 136 aa13.41□□□□□ -0.26
Gm38560-201ENSMUST00000220169 Myt1lP97500 1187 aa13.39□□□□□ -0.27
Gm38560-201ENSMUST00000220169 Gm11555B1AQ89 175 aa13.38□□□□□ -0.27
Gm38560-201ENSMUST00000220169 Mnx1Q9QZW9 404 aa13.38□□□□□ -0.27
Gm38560-201ENSMUST00000220169 Prdm10Q3UTQ7 1184 aa13.35□□□□□ -0.27
Gm38560-201ENSMUST00000220169 Cypt1Q8CH20 168 aa13.33□□□□□ -0.28
Gm38560-201ENSMUST00000220169 Onecut3Q8K557 490 aa13.33□□□□□ -0.28
Gm38560-201ENSMUST00000220169 UncxO08934 530 aa13.32□□□□□ -0.28
Gm38560-201ENSMUST00000220169 Fmr1nbQ80ZA7 238 aa13.29□□□□□ -0.28
Gm38560-201ENSMUST00000220169 Slc24a1Q91WD8 1130 aa13.28□□□□□ -0.28
Gm38560-201ENSMUST00000220169 Ano8Q6PB70 1060 aa13.27□□□□□ -0.29
Gm38560-201ENSMUST00000220169 Pbx2O35984 430 aa13.24□□□□□ -0.29
Gm38560-201ENSMUST00000220169 Lhx6Q9R1R0 363 aa13.21□□□□□ -0.29
Gm38560-201ENSMUST00000220169 Lrrc14bQ3UJB3 510 aa13.2□□□□□ -0.3
Gm38560-201ENSMUST00000220169 GcgrQ61606 485 aa13.19□□□□□ -0.3
Gm38560-201ENSMUST00000220169 Sgip1Q8VD37 806 aa13.17□□□□□ -0.3
Gm38560-201ENSMUST00000220169 Pcdhb20Q91XZ9 799 aa13.17□□□□□ -0.3
Gm38560-201ENSMUST00000220169 Crim1Q9JLL0 1037 aa13.17□□□□□ -0.3
Gm38560-201ENSMUST00000220169 Znf354bQ9QXT9 601 aa13.16□□□□□ -0.3
Gm38560-201ENSMUST00000220169 Gm11939A2A592 99 aa13.12□□□□□ -0.31
Gm38560-201ENSMUST00000220169 Klra4Q60651 263 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms