Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm25239-201ENSMUST00000174915 86 ntBASIC42.89■■■■■ 4.46
Sptlc1O35704 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
Sptlc1O35704 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Sptlc1O35704 Gm15042-201ENSMUST00000120212 883 ntBASIC37.37■■■■□ 3.57
Sptlc1O35704 Gm24109-201ENSMUST00000175489 103 ntBASIC37.23■■■■□ 3.55
Sptlc1O35704 Gm15045-201ENSMUST00000117359 883 ntBASIC36.58■■■■□ 3.45
Sptlc1O35704 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Sptlc1O35704 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
Sptlc1O35704 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Sptlc1O35704 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
Sptlc1O35704 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Sptlc1O35704 Gm23366-201ENSMUST00000175022 89 ntBASIC35.77■■■■□ 3.32
Sptlc1O35704 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Sptlc1O35704 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.2■■■■□ 3.23
Sptlc1O35704 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Sptlc1O35704 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.73■■■■□ 3.15
Sptlc1O35704 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
Sptlc1O35704 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Sptlc1O35704 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.5■■■■□ 3.11
Sptlc1O35704 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.41■■■■□ 3.1
Sptlc1O35704 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Sptlc1O35704 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.33■■■■□ 3.09
Sptlc1O35704 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Sptlc1O35704 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Sptlc1O35704 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Sptlc1O35704 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Sptlc1O35704 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Sptlc1O35704 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.97■■■■□ 3.03
Sptlc1O35704 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.93■■■■□ 3.02
Sptlc1O35704 Gm25238-201ENSMUST00000174914 89 ntBASIC33.91■■■■□ 3.02
Sptlc1O35704 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Sptlc1O35704 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.82■■■■□ 3
Sptlc1O35704 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Sptlc1O35704 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.73■■■□□ 2.99
Sptlc1O35704 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
Sptlc1O35704 Psd-208ENSMUST00000224556 2034 ntBASIC33.41■■■□□ 2.94
Sptlc1O35704 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
Sptlc1O35704 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.19■■■□□ 2.9
Sptlc1O35704 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.05■■■□□ 2.88
Sptlc1O35704 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.98■■■□□ 2.87
Sptlc1O35704 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Sptlc1O35704 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Sptlc1O35704 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.8■■■□□ 2.84
Sptlc1O35704 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
Sptlc1O35704 Gm27325-201ENSMUST00000175467 74 ntBASIC32.76■■■□□ 2.83
Sptlc1O35704 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Sptlc1O35704 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Sptlc1O35704 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.57■■■□□ 2.8
Sptlc1O35704 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Sptlc1O35704 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Sptlc1O35704 Gm25262-201ENSMUST00000174934 133 ntBASIC32.46■■■□□ 2.79
Sptlc1O35704 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.4■■■□□ 2.78
Sptlc1O35704 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Sptlc1O35704 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Sptlc1O35704 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.25■■■□□ 2.75
Sptlc1O35704 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Sptlc1O35704 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.22■■■□□ 2.75
Sptlc1O35704 Rab21-202ENSMUST00000218831 843 ntBASIC32.2■■■□□ 2.75
Sptlc1O35704 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Sptlc1O35704 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.11■■■□□ 2.73
Sptlc1O35704 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Sptlc1O35704 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.95■■■□□ 2.71
Sptlc1O35704 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Sptlc1O35704 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Sptlc1O35704 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Sptlc1O35704 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.9■■■□□ 2.7
Sptlc1O35704 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
Sptlc1O35704 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.83■■■□□ 2.69
Sptlc1O35704 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.83■■■□□ 2.69
Sptlc1O35704 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Sptlc1O35704 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Sptlc1O35704 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.78■■■□□ 2.68
Sptlc1O35704 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Sptlc1O35704 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Sptlc1O35704 Gm26115-201ENSMUST00000175605 87 ntBASIC31.67■■■□□ 2.66
Sptlc1O35704 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Sptlc1O35704 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Sptlc1O35704 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Sptlc1O35704 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Sptlc1O35704 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Sptlc1O35704 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Sptlc1O35704 Gm8109-201ENSMUST00000194076 746 ntBASIC31.53■■■□□ 2.64
Sptlc1O35704 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Sptlc1O35704 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Sptlc1O35704 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Sptlc1O35704 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Sptlc1O35704 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Sptlc1O35704 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Sptlc1O35704 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.4■■■□□ 2.62
Sptlc1O35704 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.39■■■□□ 2.62
Sptlc1O35704 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.38■■■□□ 2.61
Sptlc1O35704 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Sptlc1O35704 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.31■■■□□ 2.6
Sptlc1O35704 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sptlc1O35704 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sptlc1O35704 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Sptlc1O35704 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.19■■■□□ 2.58
Sptlc1O35704 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.18■■■□□ 2.58
Sptlc1O35704 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.16■■■□□ 2.58
Sptlc1O35704 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.16■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms