RNA–Protein interactions for RNA: ENSMUST00000206029.1

Snhg1-208, mousemouse

TSL 3 BASIC

Gene Snhg1, Length 408 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snhg1-208ENSMUST00000206029 Gm45233A0A0N4SVE0 221 aa12.49□□□□□ -0.41
Snhg1-208ENSMUST00000206029 Zbtb7bQ64321 544 aa12.49□□□□□ -0.41
Snhg1-208ENSMUST00000206029 Pde4dQ01063 747 aa12.46□□□□□ -0.41
Snhg1-208ENSMUST00000206029 Repin1Q5U4E2 545 aa12.44□□□□□ -0.42
Snhg1-208ENSMUST00000206029 ZxdbA2CE44 873 aa12.42□□□□□ -0.42
Snhg1-208ENSMUST00000206029 Atad2Q8CDM1 1040 aa12.42□□□□□ -0.42
Snhg1-208ENSMUST00000206029 Ndufv2Q9D6J6 248 aa12.36□□□□□ -0.43
Snhg1-208ENSMUST00000206029 St18Q80TY4 1045 aa12.34□□□□□ -0.43
Snhg1-208ENSMUST00000206029 Pdap1Q3UHX2 181 aaKnown RBP12.32□□□□□ -0.44
Snhg1-208ENSMUST00000206029 MycnP03966 462 aaKnown RBP12.31□□□□□ -0.44
Snhg1-208ENSMUST00000206029 Fam117bQ3U3E2 584 aa12.31□□□□□ -0.44
Snhg1-208ENSMUST00000206029 Hdac5Q9Z2V6 1113 aa12.3□□□□□ -0.44
Snhg1-208ENSMUST00000206029 Prim1P20664 417 aa12.27□□□□□ -0.45
Snhg1-208ENSMUST00000206029 Kank4Q6P9J5 1016 aa12.26□□□□□ -0.45
Snhg1-208ENSMUST00000206029 Pelp1Q9DBD5 1123 aaKnown RBP12.25□□□□□ -0.45
Snhg1-208ENSMUST00000206029 Znf579Q80VM4 562 aa12.19□□□□□ -0.46
Snhg1-208ENSMUST00000206029 Bclaf1Q8K019 919 aaKnown RBP12.17□□□□□ -0.46
Snhg1-208ENSMUST00000206029 Gm13697A2AK42 830 aa12.16□□□□□ -0.46
Snhg1-208ENSMUST00000206029 Hmx1O70218 332 aa12.16□□□□□ -0.46
Snhg1-208ENSMUST00000206029 Fam181bQ80VF6 417 aa12.16□□□□□ -0.46
Snhg1-208ENSMUST00000206029 Ube2uB1AUC4 352 aa12.15□□□□□ -0.46
Snhg1-208ENSMUST00000206029 Tulp1Q9Z273 543 aa12.15□□□□□ -0.46
Snhg1-208ENSMUST00000206029 Arhgef1Q61210 920 aaKnown RBP12.14□□□□□ -0.47
Snhg1-208ENSMUST00000206029 Lce6aD3YV94 81 aa12.08□□□□□ -0.48
Snhg1-208ENSMUST00000206029 Jph4Q80WT0 628 aa12.08□□□□□ -0.48
Snhg1-208ENSMUST00000206029 Axin1O35625 863 aa12.07□□□□□ -0.48
Snhg1-208ENSMUST00000206029 Scarf1Q5ND28 820 aa12.07□□□□□ -0.48
Snhg1-208ENSMUST00000206029 Pak3Q61036 559 aa12.07□□□□□ -0.48
Snhg1-208ENSMUST00000206029 EdaraddQ8VHX2 208 aa12.05□□□□□ -0.48
Snhg1-208ENSMUST00000206029 C1qbpO35658 278 aa12.03□□□□□ -0.48
Snhg1-208ENSMUST00000206029 Gm11563B1AQ90 168 aa12□□□□□ -0.49
Snhg1-208ENSMUST00000206029 Pcdh10E9PXQ7 1057 aa12□□□□□ -0.49
Snhg1-208ENSMUST00000206029 Krtap4-7Q9D732 168 aa12□□□□□ -0.49
Snhg1-208ENSMUST00000206029 Pcdhb17Q91VD8 799 aa11.97□□□□□ -0.49
Snhg1-208ENSMUST00000206029 Gm11555B1AQ89 175 aa11.95□□□□□ -0.5
Snhg1-208ENSMUST00000206029 Dkk1O54908 272 aa11.93□□□□□ -0.5
Snhg1-208ENSMUST00000206029 Chrm1P12657 460 aa11.93□□□□□ -0.5
Snhg1-208ENSMUST00000206029 Irx5Q9JKQ4 484 aa11.87□□□□□ -0.51
Snhg1-208ENSMUST00000206029 E9Q0B3 247 aa11.84□□□□□ -0.51
Snhg1-208ENSMUST00000206029 Msh5Q9QUM7 833 aa11.84□□□□□ -0.51
Snhg1-208ENSMUST00000206029 Fndc3aQ8BX90 1198 aa11.83□□□□□ -0.52
Snhg1-208ENSMUST00000206029 Evi5P97366 809 aa11.82□□□□□ -0.52
Snhg1-208ENSMUST00000206029 ElnP54320 860 aa11.8□□□□□ -0.52
Snhg1-208ENSMUST00000206029 Adnp2Q8CHC8 1165 aaKnown RBP11.79□□□□□ -0.52
Snhg1-208ENSMUST00000206029 Spock2Q9ER58 423 aa11.79□□□□□ -0.52
Snhg1-208ENSMUST00000206029 Ier5lQ99J55 406 aa11.78□□□□□ -0.52
Snhg1-208ENSMUST00000206029 Actn4P57780 912 aaKnown RBP11.75□□□□□ -0.53
Snhg1-208ENSMUST00000206029 Scnn1bQ9WU38 638 aa11.74□□□□□ -0.53
Snhg1-208ENSMUST00000206029 PsdQ5DTT2 1024 aa11.73□□□□□ -0.53
Snhg1-208ENSMUST00000206029 Thap8E9Q695 213 aa11.72□□□□□ -0.53
Snhg1-208ENSMUST00000206029 Ppp6r1Q7TSI3 856 aa11.72□□□□□ -0.53
Snhg1-208ENSMUST00000206029 Ferd3lQ923Z4 168 aa11.71□□□□□ -0.53
Snhg1-208ENSMUST00000206029 Gga1Q8R0H9 635 aa11.67□□□□□ -0.54
Snhg1-208ENSMUST00000206029 Sall2Q9QX96 1004 aa11.66□□□□□ -0.54
Snhg1-208ENSMUST00000206029 Fkbp4P30416 458 aa11.64□□□□□ -0.55
Snhg1-208ENSMUST00000206029 RragcQ99K70 398 aa11.63□□□□□ -0.55
Snhg1-208ENSMUST00000206029 Smpd1Q04519 627 aa11.62□□□□□ -0.55
Snhg1-208ENSMUST00000206029 TimelessQ9R1X4 1197 aa11.61□□□□□ -0.55
Snhg1-208ENSMUST00000206029 Pdzrn4E9PUZ9 1014 aa11.6□□□□□ -0.55
Snhg1-208ENSMUST00000206029 Rnf166Q3U9F6 237 aa11.58□□□□□ -0.56
Snhg1-208ENSMUST00000206029 Ecm2Q5FW85 670 aa11.57□□□□□ -0.56
Snhg1-208ENSMUST00000206029 Ankrd65F6YK91 380 aa11.56□□□□□ -0.56
Snhg1-208ENSMUST00000206029 Apba1B2RUJ5 842 aa11.52□□□□□ -0.57
Snhg1-208ENSMUST00000206029 Myt1lP97500 1187 aa11.5□□□□□ -0.57
Snhg1-208ENSMUST00000206029 Dnm1lQ8K1M6 742 aa11.5□□□□□ -0.57
Snhg1-208ENSMUST00000206029 Otop3Q80UF9 577 aa11.47□□□□□ -0.57
Snhg1-208ENSMUST00000206029 Setdb2Q8C267 713 aa11.47□□□□□ -0.57
Snhg1-208ENSMUST00000206029 Stk3Q9JI10 497 aa11.46□□□□□ -0.57
Snhg1-208ENSMUST00000206029 Tox2A2A472 547 aa11.45□□□□□ -0.58
Snhg1-208ENSMUST00000206029 Hoxa2P31245 372 aa11.45□□□□□ -0.58
Snhg1-208ENSMUST00000206029 Zbtb22Q9Z0G7 638 aa11.45□□□□□ -0.58
Snhg1-208ENSMUST00000206029 Nap1l5Q9JJF0 156 aa11.42□□□□□ -0.58
Snhg1-208ENSMUST00000206029 Mnx1Q9QZW9 404 aa11.41□□□□□ -0.58
Snhg1-208ENSMUST00000206029 Fmr1nbQ80ZA7 238 aa11.38□□□□□ -0.59
Snhg1-208ENSMUST00000206029 Sptlc1O35704 473 aa11.37□□□□□ -0.59
Snhg1-208ENSMUST00000206029 Gm11939A2A592 99 aa11.36□□□□□ -0.59
Snhg1-208ENSMUST00000206029 Ano8Q6PB70 1060 aa11.34□□□□□ -0.59
Snhg1-208ENSMUST00000206029 Neurod1Q60867 357 aa11.32□□□□□ -0.6
Snhg1-208ENSMUST00000206029 Slc4a2P13808 1237 aaKnown RBP11.3□□□□□ -0.6
Snhg1-208ENSMUST00000206029 Lhx6Q9R1R0 363 aa11.29□□□□□ -0.6
Snhg1-208ENSMUST00000206029 Kdm2aP59997 1161 aa11.27□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Onecut3Q8K557 490 aa11.27□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Rgl2Q61193 778 aa11.26□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Cypt1Q8CH20 168 aa11.26□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Stk24Q99KH8 431 aa11.25□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Gabbr2Q80T41 940 aa11.23□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Crim1Q9JLL0 1037 aa11.22□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Pbx2O35984 430 aa11.21□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Mier1Q5UAK0 511 aa11.21□□□□□ -0.61
Snhg1-208ENSMUST00000206029 Lrrc14bQ3UJB3 510 aa11.2□□□□□ -0.62
Snhg1-208ENSMUST00000206029 Stk25Q9Z2W1 426 aa11.18□□□□□ -0.62
Snhg1-208ENSMUST00000206029 GcgrQ61606 485 aa11.16□□□□□ -0.62
Snhg1-208ENSMUST00000206029 Myt1Q8CFC2 1127 aa11.16□□□□□ -0.62
Snhg1-208ENSMUST00000206029 Emid1Q91VF5 444 aa11.15□□□□□ -0.62
Snhg1-208ENSMUST00000206029 Znf354bQ9QXT9 601 aa11.15□□□□□ -0.62
Snhg1-208ENSMUST00000206029 UncxO08934 530 aa11.12□□□□□ -0.63
Snhg1-208ENSMUST00000206029 Rsph6aQ8CDR2 708 aa11.12□□□□□ -0.63
Snhg1-208ENSMUST00000206029 Klra4Q60651 263 aa11.11□□□□□ -0.63
Snhg1-208ENSMUST00000206029 Pcdhb20Q91XZ9 799 aa11.09□□□□□ -0.63
Snhg1-208ENSMUST00000206029 Erich4Q3UNU4 136 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms