RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 AqrQ8CFQ3 1481 aaKnown RBP14.55□□□□□ -0.08
Usp4-209ENSMUST00000194959 Ncapd3Q6ZQK0 1506 aa14.55□□□□□ -0.08
Usp4-209ENSMUST00000194959 LrpprcQ6PB66 1392 aaKnown RBP14.55□□□□□ -0.08
Usp4-209ENSMUST00000194959 Aebp1Q640N1 1128 aa14.53□□□□□ -0.08
Usp4-209ENSMUST00000194959 Slc24a1Q91WD8 1130 aa14.52□□□□□ -0.08
Usp4-209ENSMUST00000194959 Dnajc5bQ9CQ94 199 aa14.51□□□□□ -0.09
Usp4-209ENSMUST00000194959 Mroh2bQ7M6Y6 1581 aa14.5□□□□□ -0.09
Usp4-209ENSMUST00000194959 Hspa5P20029 655 aaKnown RBP14.5□□□□□ -0.09
Usp4-209ENSMUST00000194959 Arhgef5E9Q7D5 1581 aa14.49□□□□□ -0.09
Usp4-209ENSMUST00000194959 Naip1Q9QWK5 1403 aa14.49□□□□□ -0.09
Usp4-209ENSMUST00000194959 Rad54l2Q99NG0 1466 aa14.48□□□□□ -0.09
Usp4-209ENSMUST00000194959 Eif4g1Q6NZJ6 1600 aaKnown RBP14.48□□□□□ -0.09
Usp4-209ENSMUST00000194959 Anks4bQ8K3X6 423 aa14.48□□□□□ -0.09
Usp4-209ENSMUST00000194959 Dhx29Q6PGC1 1365 aaKnown RBP14.46□□□□□ -0.09
Usp4-209ENSMUST00000194959 Fkbp15Q6P9Q6 1216 aaKnown RBP14.46□□□□□ -0.1
Usp4-209ENSMUST00000194959 Duox2A2AQ99 1517 aa14.45□□□□□ -0.1
Usp4-209ENSMUST00000194959 Unc13aQ4KUS2 1712 aa14.44□□□□□ -0.1
Usp4-209ENSMUST00000194959 Carmil1Q6EDY6 1374 aa14.43□□□□□ -0.1
Usp4-209ENSMUST00000194959 Zbtb7cQ8VCZ7 619 aa14.42□□□□□ -0.1
Usp4-209ENSMUST00000194959 Efcab5A0JP43 1406 aa14.4□□□□□ -0.1
Usp4-209ENSMUST00000194959 Cux1P53564 1515 aa14.39□□□□□ -0.11
Usp4-209ENSMUST00000194959 Map3k1P53349 1493 aa14.39□□□□□ -0.11
Usp4-209ENSMUST00000194959 PogzQ8BZH4 1409 aaKnown RBP14.39□□□□□ -0.11
Usp4-209ENSMUST00000194959 Tiam1Q60610 1591 aa14.37□□□□□ -0.11
Usp4-209ENSMUST00000194959 CntlnA2AM05 1397 aa14.37□□□□□ -0.11
Usp4-209ENSMUST00000194959 Sin3aQ60520 1274 aaKnown RBP14.36□□□□□ -0.11
Usp4-209ENSMUST00000194959 Ankrd26Q811D2 1581 aa14.36□□□□□ -0.11
Usp4-209ENSMUST00000194959 Pcf11G3X9Z4 1553 aa14.35□□□□□ -0.11
Usp4-209ENSMUST00000194959 Rpap1Q80TE0 1409 aa14.35□□□□□ -0.11
Usp4-209ENSMUST00000194959 Arhgap27A2AB59 869 aa14.35□□□□□ -0.11
Usp4-209ENSMUST00000194959 Slx4Q6P1D7 1565 aa14.35□□□□□ -0.11
Usp4-209ENSMUST00000194959 1700123L14RikQ3V2K7 440 aa14.34□□□□□ -0.11
Usp4-209ENSMUST00000194959 3425401B19RikD3Z1D3 1412 aa14.29□□□□□ -0.12
Usp4-209ENSMUST00000194959 Fyco1Q8VDC1 1437 aa14.29□□□□□ -0.12
Usp4-209ENSMUST00000194959 Kif27Q7M6Z4 1394 aa14.29□□□□□ -0.12
Usp4-209ENSMUST00000194959 Ccnb3Q810T2 1396 aa14.29□□□□□ -0.12
Usp4-209ENSMUST00000194959 Cabp1Q9JLK7 227 aa14.27□□□□□ -0.12
Usp4-209ENSMUST00000194959 Zbtb4Q5F293 982 aa14.25□□□□□ -0.13
Usp4-209ENSMUST00000194959 Ifnlr1Q8CGK5 535 aa14.25□□□□□ -0.13
Usp4-209ENSMUST00000194959 Samd9lQ69Z37 1561 aa14.25□□□□□ -0.13
Usp4-209ENSMUST00000194959 Zfp644E9QA22 1323 aa14.24□□□□□ -0.13
Usp4-209ENSMUST00000194959 Thoc2B1AZI6 1594 aaKnown RBP14.23□□□□□ -0.13
Usp4-209ENSMUST00000194959 Hnrnpul2Q00PI9 745 aaKnown RBP14.23□□□□□ -0.13
Usp4-209ENSMUST00000194959 Ccer2J3QPU5 274 aa14.22□□□□□ -0.13
Usp4-209ENSMUST00000194959 SafbD3YXK2 937 aaKnown RBP14.21□□□□□ -0.13
Usp4-209ENSMUST00000194959 Mia2Q91ZV0 1396 aa14.2□□□□□ -0.14
Usp4-209ENSMUST00000194959 SynmQ70IV5 1561 aa14.2□□□□□ -0.14
Usp4-209ENSMUST00000194959 Plb1Q3TTY0 1478 aa14.2□□□□□ -0.14
Usp4-209ENSMUST00000194959 Eif5bQ05D44 1216 aaKnown RBP14.19□□□□□ -0.14
Usp4-209ENSMUST00000194959 Urb2E9Q7L1 1524 aaKnown RBP14.19□□□□□ -0.14
Usp4-209ENSMUST00000194959 EprsQ8CGC7 1512 aaKnown RBP14.18□□□□□ -0.14
Usp4-209ENSMUST00000194959 CadpsQ80TJ1 1355 aa14.18□□□□□ -0.14
Usp4-209ENSMUST00000194959 Gm7298A0A0N4SVU1 1476 aa14.17□□□□□ -0.14
Usp4-209ENSMUST00000194959 WrnO09053 1401 aa14.17□□□□□ -0.14
Usp4-209ENSMUST00000194959 Mphosph9A6H5Y1 991 aa14.17□□□□□ -0.14
Usp4-209ENSMUST00000194959 Kdm5bQ80Y84 1544 aa14.16□□□□□ -0.14
Usp4-209ENSMUST00000194959 Gm1043A0A140LJC2 1431 aa14.15□□□□□ -0.14
Usp4-209ENSMUST00000194959 Rgl3Q3UYI5 709 aa14.15□□□□□ -0.14
Usp4-209ENSMUST00000194959 Crocc2F6XLV1 1638 aa14.14□□□□□ -0.15
Usp4-209ENSMUST00000194959 Mrc2Q64449 1479 aa14.13□□□□□ -0.15
Usp4-209ENSMUST00000194959 Erich3F6QRE9 1637 aa14.13□□□□□ -0.15
Usp4-209ENSMUST00000194959 A2mQ6GQT1 1474 aa14.12□□□□□ -0.15
Usp4-209ENSMUST00000194959 Pkd2O35245 966 aa14.12□□□□□ -0.15
Usp4-209ENSMUST00000194959 Fam135aQ6NS59 1506 aa14.12□□□□□ -0.15
Usp4-209ENSMUST00000194959 Fhad1A6PWD2 1420 aa14.11□□□□□ -0.15
Usp4-209ENSMUST00000194959 Lmo7E9PYF4 1699 aaKnown RBP14.1□□□□□ -0.15
Usp4-209ENSMUST00000194959 CenpbP27790 599 aa14.1□□□□□ -0.15
Usp4-209ENSMUST00000194959 Naip2Q9QUK4 1447 aa14.1□□□□□ -0.15
Usp4-209ENSMUST00000194959 Kif21aQ9QXL2 1672 aa14.09□□□□□ -0.15
Usp4-209ENSMUST00000194959 Gm13697A2AK42 830 aa14.09□□□□□ -0.15
Usp4-209ENSMUST00000194959 Gpatch8A2A6A1 1505 aa14.09□□□□□ -0.15
Usp4-209ENSMUST00000194959 Pla2r1Q62028 1487 aa14.09□□□□□ -0.15
Usp4-209ENSMUST00000194959 Grwd1Q810D6 446 aaKnown RBP14.09□□□□□ -0.15
Usp4-209ENSMUST00000194959 Grin2aP35436 1464 aa14.08□□□□□ -0.16
Usp4-209ENSMUST00000194959 TchhA0A0B4J1F9 1599 aa14.08□□□□□ -0.16
Usp4-209ENSMUST00000194959 Stra8P70278 393 aa14.07□□□□□ -0.16
Usp4-209ENSMUST00000194959 Vps8Q0P5W1 1427 aa14.06□□□□□ -0.16
Usp4-209ENSMUST00000194959 Polr1aO35134 1717 aaKnown RBP14.05□□□□□ -0.16
Usp4-209ENSMUST00000194959 Mtus2Q3UHD3 1353 aa14.05□□□□□ -0.16
Usp4-209ENSMUST00000194959 Mrs2Q5NCE8 434 aa14.04□□□□□ -0.16
Usp4-209ENSMUST00000194959 Wwc2Q6NXJ0 1187 aa14.04□□□□□ -0.16
Usp4-209ENSMUST00000194959 PxdnQ3UQ28 1475 aa14.04□□□□□ -0.16
Usp4-209ENSMUST00000194959 Trak1Q6PD31 939 aa14.04□□□□□ -0.16
Usp4-209ENSMUST00000194959 P3h3Q8CG70 732 aa14.03□□□□□ -0.16
Usp4-209ENSMUST00000194959 NexmifQ5DTT1 1515 aa14.02□□□□□ -0.16
Usp4-209ENSMUST00000194959 Aplp2Q06335 707 aa14.02□□□□□ -0.16
Usp4-209ENSMUST00000194959 Disp1Q3TDN0 1521 aa14.02□□□□□ -0.16
Usp4-209ENSMUST00000194959 Tnnt3Q9QZ47 272 aa14.02□□□□□ -0.17
Usp4-209ENSMUST00000194959 WizO88286 1684 aaKnown RBP14.02□□□□□ -0.17
Usp4-209ENSMUST00000194959 Magi3Q9EQJ9 1476 aa14.01□□□□□ -0.17
Usp4-209ENSMUST00000194959 BC005561E9Q5E2 1589 aa14.01□□□□□ -0.17
Usp4-209ENSMUST00000194959 NrdcQ8BHG1 1161 aa14□□□□□ -0.17
Usp4-209ENSMUST00000194959 Usp47Q8BY87 1376 aa14□□□□□ -0.17
Usp4-209ENSMUST00000194959 AknaQ80VW7 1404 aa13.99□□□□□ -0.17
Usp4-209ENSMUST00000194959 Ncoa3O09000 1398 aa13.98□□□□□ -0.17
Usp4-209ENSMUST00000194959 Tdrd9Q14BI7 1383 aa13.98□□□□□ -0.17
Usp4-209ENSMUST00000194959 Ankrd36D3Z4K0 1415 aa13.98□□□□□ -0.17
Usp4-209ENSMUST00000194959 Rrp7aQ9D1C9 280 aaKnown RBP13.97□□□□□ -0.17
Usp4-209ENSMUST00000194959 Erich6D3Z6S9 713 aa13.96□□□□□ -0.17
Usp4-209ENSMUST00000194959 Plekhh2Q8C115 1491 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 79.3 ms