RNA–Protein interactions for RNA: ENSMUST00000176778.7

Cux1-212, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cux1, Length 5,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-212ENSMUST00000176778 Mier1Q5UAK0 511 aa20.97■□□□□ 0.95
Cux1-212ENSMUST00000176778 Supt5hO55201 1082 aaKnown RBP20.91■□□□□ 0.94
Cux1-212ENSMUST00000176778 Eea1Q8BL66 1411 aa20.87■□□□□ 0.93
Cux1-212ENSMUST00000176778 BlmO88700 1416 aa20.87■□□□□ 0.93
Cux1-212ENSMUST00000176778 Ccdc88bQ4QRL3 1481 aa20.86■□□□□ 0.93
Cux1-212ENSMUST00000176778 Ccer2J3QPU5 274 aa20.85■□□□□ 0.93
Cux1-212ENSMUST00000176778 Arhgap27A2AB59 869 aa20.85■□□□□ 0.93
Cux1-212ENSMUST00000176778 BicraF8VPZ9 1578 aa20.84■□□□□ 0.93
Cux1-212ENSMUST00000176778 DaxxO35613 739 aa20.77■□□□□ 0.92
Cux1-212ENSMUST00000176778 LrpprcQ6PB66 1392 aaKnown RBP20.77■□□□□ 0.92
Cux1-212ENSMUST00000176778 ArxO35085 564 aa20.73■□□□□ 0.91
Cux1-212ENSMUST00000176778 Clstn2Q9ER65 966 aa20.71■□□□□ 0.91
Cux1-212ENSMUST00000176778 Mapk8ip2Q9ERE9 830 aa20.7■□□□□ 0.91
Cux1-212ENSMUST00000176778 Cep162Q6ZQ06 1403 aa20.67■□□□□ 0.9
Cux1-212ENSMUST00000176778 Safb2Q80YR5 991 aaKnown RBP20.67■□□□□ 0.9
Cux1-212ENSMUST00000176778 ClspnQ80YR7 1315 aa20.67■□□□□ 0.9
Cux1-212ENSMUST00000176778 Dhx29Q6PGC1 1365 aaKnown RBP20.66■□□□□ 0.9
Cux1-212ENSMUST00000176778 Anp32aO35381 247 aa20.64■□□□□ 0.89
Cux1-212ENSMUST00000176778 Rangap1P46061 589 aaKnown RBP20.63■□□□□ 0.89
Cux1-212ENSMUST00000176778 Baz1bQ9Z277 1479 aa20.61■□□□□ 0.89
Cux1-212ENSMUST00000176778 Frmpd1A2AKB4 1549 aa20.6■□□□□ 0.89
Cux1-212ENSMUST00000176778 Eid3Q3V124 375 aa20.59■□□□□ 0.89
Cux1-212ENSMUST00000176778 Carmil1Q6EDY6 1374 aa20.57■□□□□ 0.88
Cux1-212ENSMUST00000176778 AknaQ80VW7 1404 aa20.53■□□□□ 0.88
Cux1-212ENSMUST00000176778 Csrnp3P59055 597 aa20.52■□□□□ 0.88
Cux1-212ENSMUST00000176778 Kif27Q7M6Z4 1394 aa20.52■□□□□ 0.88
Cux1-212ENSMUST00000176778 Mrc2Q64449 1479 aa20.52■□□□□ 0.88
Cux1-212ENSMUST00000176778 Chic2Q9D9G3 165 aa20.52■□□□□ 0.88
Cux1-212ENSMUST00000176778 Hsp90aa1P07901 733 aaKnown RBP20.52■□□□□ 0.87
Cux1-212ENSMUST00000176778 Wdr62Q3U3T8 1523 aa20.49■□□□□ 0.87
Cux1-212ENSMUST00000176778 Rpap1Q80TE0 1409 aa20.47■□□□□ 0.87
Cux1-212ENSMUST00000176778 Efcab5A0JP43 1406 aa20.46■□□□□ 0.87
Cux1-212ENSMUST00000176778 Aebp1Q640N1 1128 aa20.44■□□□□ 0.86
Cux1-212ENSMUST00000176778 Upf2A2AT37 1269 aaKnown RBP20.43■□□□□ 0.86
Cux1-212ENSMUST00000176778 P3h3Q8CG70 732 aa20.39■□□□□ 0.85
Cux1-212ENSMUST00000176778 CntlnA2AM05 1397 aa20.38■□□□□ 0.85
Cux1-212ENSMUST00000176778 Rad21Q61550 635 aaKnown RBP20.38■□□□□ 0.85
Cux1-212ENSMUST00000176778 Mtus2Q3UHD3 1353 aa20.38■□□□□ 0.85
Cux1-212ENSMUST00000176778 CatipB9EKE5 520 aa20.37■□□□□ 0.85
Cux1-212ENSMUST00000176778 Dhx57Q6P5D3 1388 aaKnown RBP20.36■□□□□ 0.85
Cux1-212ENSMUST00000176778 Rapgef2Q8CHG7 1496 aa20.34■□□□□ 0.85
Cux1-212ENSMUST00000176778 Fgd1P52734 960 aa20.33■□□□□ 0.85
Cux1-212ENSMUST00000176778 Cc2d2aQ8CFW7 1633 aa20.32■□□□□ 0.84
Cux1-212ENSMUST00000176778 Pabpn1Q8CCS6 302 aaKnown RBP20.31■□□□□ 0.84
Cux1-212ENSMUST00000176778 Fyco1Q8VDC1 1437 aa20.3■□□□□ 0.84
Cux1-212ENSMUST00000176778 Shroom4Q1W617 1475 aa20.29■□□□□ 0.84
Cux1-212ENSMUST00000176778 Mia2Q91ZV0 1396 aa20.29■□□□□ 0.84
Cux1-212ENSMUST00000176778 Urb2E9Q7L1 1524 aaKnown RBP20.29■□□□□ 0.84
Cux1-212ENSMUST00000176778 Znf326O88291 580 aa20.28■□□□□ 0.84
Cux1-212ENSMUST00000176778 Ppp1r18Q8BQ30 594 aa20.28■□□□□ 0.84
Cux1-212ENSMUST00000176778 NrkQ9R0G8 1455 aa20.27■□□□□ 0.84
Cux1-212ENSMUST00000176778 PogzQ8BZH4 1409 aaKnown RBP20.25■□□□□ 0.83
Cux1-212ENSMUST00000176778 Duox2A2AQ99 1517 aa20.24■□□□□ 0.83
Cux1-212ENSMUST00000176778 Top2aQ01320 1528 aaKnown RBP20.24■□□□□ 0.83
Cux1-212ENSMUST00000176778 Gm38655A0A286YDK6 273 aa20.24■□□□□ 0.83
Cux1-212ENSMUST00000176778 Rrp7aQ9D1C9 280 aaKnown RBP20.22■□□□□ 0.83
Cux1-212ENSMUST00000176778 Irx6Q9ER75 438 aa20.2■□□□□ 0.82
Cux1-212ENSMUST00000176778 Trim26Q99PN3 545 aa20.18■□□□□ 0.82
Cux1-212ENSMUST00000176778 Arid3cA6PWV5 409 aa20.18■□□□□ 0.82
Cux1-212ENSMUST00000176778 Grin2bQ01097 1482 aa20.18■□□□□ 0.82
Cux1-212ENSMUST00000176778 Polr1aO35134 1717 aaKnown RBP20.16■□□□□ 0.82
Cux1-212ENSMUST00000176778 Ppp4r2Q0VGB7 417 aa20.16■□□□□ 0.82
Cux1-212ENSMUST00000176778 Ift140E9PY46 1464 aa20.15■□□□□ 0.82
Cux1-212ENSMUST00000176778 DekQ7TNV0 380 aaKnown RBP20.15■□□□□ 0.82
Cux1-212ENSMUST00000176778 Lamc3Q9R0B6 1581 aa20.14■□□□□ 0.81
Cux1-212ENSMUST00000176778 Lemd3Q9WU40 921 aa20.14■□□□□ 0.81
Cux1-212ENSMUST00000176778 Soga1E1U8D0 1418 aa20.13■□□□□ 0.81
Cux1-212ENSMUST00000176778 Vsig10D3YX43 558 aa20.13■□□□□ 0.81
Cux1-212ENSMUST00000176778 Calr4Q3TQS0 420 aa20.12■□□□□ 0.81
Cux1-212ENSMUST00000176778 Mrs2Q5NCE8 434 aa20.11■□□□□ 0.81
Cux1-212ENSMUST00000176778 Ythdc1E9Q5K9 736 aaKnown RBP20.11■□□□□ 0.81
Cux1-212ENSMUST00000176778 WrnO09053 1401 aa20.11■□□□□ 0.81
Cux1-212ENSMUST00000176778 Top2bQ64511 1612 aa20.1■□□□□ 0.81
Cux1-212ENSMUST00000176778 Jph4Q80WT0 628 aa20.1■□□□□ 0.81
Cux1-212ENSMUST00000176778 Cc2d2bA0A286YDU8 1405 aa20.1■□□□□ 0.81
Cux1-212ENSMUST00000176778 IqubQ8CDK3 788 aa20.09■□□□□ 0.81
Cux1-212ENSMUST00000176778 Rad54l2Q99NG0 1466 aa20.07■□□□□ 0.8
Cux1-212ENSMUST00000176778 Ncoa2Q61026 1462 aa20.06■□□□□ 0.8
Cux1-212ENSMUST00000176778 Camsap1A2AHC3 1581 aa20.06■□□□□ 0.8
Cux1-212ENSMUST00000176778 Fgd6Q69ZL1 1399 aa20.05■□□□□ 0.8
Cux1-212ENSMUST00000176778 Sall2Q9QX96 1004 aa20.05■□□□□ 0.8
Cux1-212ENSMUST00000176778 Map3k1P53349 1493 aa20.05■□□□□ 0.8
Cux1-212ENSMUST00000176778 Arhgap35Q91YM2 1499 aa20.04■□□□□ 0.8
Cux1-212ENSMUST00000176778 Lmod3E9QA62 571 aa20.02■□□□□ 0.8
Cux1-212ENSMUST00000176778 Dnajc5bQ9CQ94 199 aa20.01■□□□□ 0.79
Cux1-212ENSMUST00000176778 Plb1Q3TTY0 1478 aa20.01■□□□□ 0.79
Cux1-212ENSMUST00000176778 Rgl3Q3UYI5 709 aa20.01■□□□□ 0.79
Cux1-212ENSMUST00000176778 Rsph4aQ8BYM7 716 aa20.01■□□□□ 0.79
Cux1-212ENSMUST00000176778 Fam135aQ6NS59 1506 aa20■□□□□ 0.79
Cux1-212ENSMUST00000176778 Zfp777B9EKF4 885 aa19.99■□□□□ 0.79
Cux1-212ENSMUST00000176778 Crocc2F6XLV1 1638 aa19.97■□□□□ 0.79
Cux1-212ENSMUST00000176778 Mroh3A0A1D5RM54 893 aa19.97■□□□□ 0.79
Cux1-212ENSMUST00000176778 Map4P27546 1125 aaKnown RBP19.95■□□□□ 0.78
Cux1-212ENSMUST00000176778 Kdm2aP59997 1161 aa19.94■□□□□ 0.78
Cux1-212ENSMUST00000176778 Wdr43Q6ZQL4 677 aaKnown RBP19.94■□□□□ 0.78
Cux1-212ENSMUST00000176778 Plekhh2Q8C115 1491 aa19.94■□□□□ 0.78
Cux1-212ENSMUST00000176778 Mroh2bQ7M6Y6 1581 aa19.93■□□□□ 0.78
Cux1-212ENSMUST00000176778 MyclP10166 368 aa19.93■□□□□ 0.78
Cux1-212ENSMUST00000176778 Ccnb3Q810T2 1396 aa19.92■□□□□ 0.78
Cux1-212ENSMUST00000176778 Rtn4Q99P72 1162 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms