RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Ttbk1Q6PCN3 1308 aa23.49■■□□□ 1.35
Prpf40b-212ENSMUST00000145482 Cep162Q6ZQ06 1403 aa23.48■■□□□ 1.35
Prpf40b-212ENSMUST00000145482 LrpprcQ6PB66 1392 aaKnown RBP23.47■■□□□ 1.35
Prpf40b-212ENSMUST00000145482 Mrc2Q64449 1479 aa23.44■■□□□ 1.34
Prpf40b-212ENSMUST00000145482 Dhx29Q6PGC1 1365 aaKnown RBP23.41■■□□□ 1.34
Prpf40b-212ENSMUST00000145482 Grin2bQ01097 1482 aa23.38■■□□□ 1.33
Prpf40b-212ENSMUST00000145482 Shroom4Q1W617 1475 aa23.29■■□□□ 1.32
Prpf40b-212ENSMUST00000145482 Duox2A2AQ99 1517 aa23.28■■□□□ 1.32
Prpf40b-212ENSMUST00000145482 PogzQ8BZH4 1409 aaKnown RBP23.28■■□□□ 1.32
Prpf40b-212ENSMUST00000145482 Baz1bQ9Z277 1479 aa23.27■■□□□ 1.31
Prpf40b-212ENSMUST00000145482 NrkQ9R0G8 1455 aa23.24■■□□□ 1.31
Prpf40b-212ENSMUST00000145482 Arhgap35Q91YM2 1499 aa23.23■■□□□ 1.31
Prpf40b-212ENSMUST00000145482 Slc24a1Q91WD8 1130 aa23.21■■□□□ 1.31
Prpf40b-212ENSMUST00000145482 Clip1Q922J3 1391 aa23.21■■□□□ 1.31
Prpf40b-212ENSMUST00000145482 Tnnt3Q9QZ47 272 aa23.2■■□□□ 1.3
Prpf40b-212ENSMUST00000145482 Rad54l2Q99NG0 1466 aa23.19■■□□□ 1.3
Prpf40b-212ENSMUST00000145482 Kif21aQ9QXL2 1672 aa23.18■■□□□ 1.3
Prpf40b-212ENSMUST00000145482 Efcab5A0JP43 1406 aa23.16■■□□□ 1.3
Prpf40b-212ENSMUST00000145482 Plb1Q3TTY0 1478 aa23.14■■□□□ 1.29
Prpf40b-212ENSMUST00000145482 Anp32aO35381 247 aa23.13■■□□□ 1.29
Prpf40b-212ENSMUST00000145482 Amer1Q7TS75 1132 aa23.1■■□□□ 1.29
Prpf40b-212ENSMUST00000145482 Urb2E9Q7L1 1524 aaKnown RBP23.07■■□□□ 1.28
Prpf40b-212ENSMUST00000145482 Setd5Q5XJV7 1441 aa23.07■■□□□ 1.28
Prpf40b-212ENSMUST00000145482 Lmod2Q3UHZ5 550 aa23.05■■□□□ 1.28
Prpf40b-212ENSMUST00000145482 Mroh2bQ7M6Y6 1581 aa23.05■■□□□ 1.28
Prpf40b-212ENSMUST00000145482 Crocc2F6XLV1 1638 aa23.03■■□□□ 1.28
Prpf40b-212ENSMUST00000145482 Samd9lQ69Z37 1561 aa23.01■■□□□ 1.27
Prpf40b-212ENSMUST00000145482 Nolc1E9Q5C9 702 aaKnown RBP22.98■■□□□ 1.27
Prpf40b-212ENSMUST00000145482 NclP09405 707 aaKnown RBP22.98■■□□□ 1.27
Prpf40b-212ENSMUST00000145482 Pelp1Q9DBD5 1123 aaKnown RBP22.95■■□□□ 1.26
Prpf40b-212ENSMUST00000145482 Eea1Q8BL66 1411 aa22.94■■□□□ 1.26
Prpf40b-212ENSMUST00000145482 Eif4g1Q6NZJ6 1600 aaKnown RBP22.93■■□□□ 1.26
Prpf40b-212ENSMUST00000145482 Fam50aQ9WV03 339 aaKnown RBP22.93■■□□□ 1.26
Prpf40b-212ENSMUST00000145482 Carmil1Q6EDY6 1374 aa22.91■■□□□ 1.26
Prpf40b-212ENSMUST00000145482 Eif5bQ05D44 1216 aaKnown RBP22.88■■□□□ 1.25
Prpf40b-212ENSMUST00000145482 Calr4Q3TQS0 420 aa22.85■■□□□ 1.25
Prpf40b-212ENSMUST00000145482 Map3k1P53349 1493 aa22.84■■□□□ 1.25
Prpf40b-212ENSMUST00000145482 Disp1Q3TDN0 1521 aa22.83■■□□□ 1.25
Prpf40b-212ENSMUST00000145482 Arhgap27A2AB59 869 aa22.83■■□□□ 1.25
Prpf40b-212ENSMUST00000145482 SynmQ70IV5 1561 aa22.83■■□□□ 1.24
Prpf40b-212ENSMUST00000145482 Arap1Q4LDD4 1452 aa22.82■■□□□ 1.24
Prpf40b-212ENSMUST00000145482 Cux1P53564 1515 aa22.79■■□□□ 1.24
Prpf40b-212ENSMUST00000145482 Ppp4r2Q0VGB7 417 aa22.79■■□□□ 1.24
Prpf40b-212ENSMUST00000145482 Lrriq1Q0P5X1 1673 aa22.78■■□□□ 1.24
Prpf40b-212ENSMUST00000145482 BlmO88700 1416 aa22.77■■□□□ 1.24
Prpf40b-212ENSMUST00000145482 Rpap1Q80TE0 1409 aa22.77■■□□□ 1.24
Prpf40b-212ENSMUST00000145482 Aebp1Q640N1 1128 aa22.77■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Grin2aP35436 1464 aa22.76■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Fkbp15Q6P9Q6 1216 aaKnown RBP22.75■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Pla2r1Q62028 1487 aa22.74■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Magi3Q9EQJ9 1476 aa22.73■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Supt16hQ920B9 1047 aa22.72■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Ube2uB1AUC4 352 aa22.71■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Hdac5Q9Z2V6 1113 aa22.71■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 EprsQ8CGC7 1512 aaKnown RBP22.7■■□□□ 1.23
Prpf40b-212ENSMUST00000145482 Stra8P70278 393 aa22.69■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 Znf710Q3U288 666 aa22.69■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 AqrQ8CFQ3 1481 aaKnown RBP22.69■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 Ift140E9PY46 1464 aa22.69■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 Rtl5Q5DTT4 599 aa22.67■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 Ankrd26Q811D2 1581 aa22.67■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 Ncapd3Q6ZQK0 1506 aa22.67■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 CadpsQ80TJ1 1355 aa22.65■■□□□ 1.22
Prpf40b-212ENSMUST00000145482 Fyco1Q8VDC1 1437 aa22.61■■□□□ 1.21
Prpf40b-212ENSMUST00000145482 Arhgef5E9Q7D5 1581 aa22.58■■□□□ 1.21
Prpf40b-212ENSMUST00000145482 Gm7298A0A0N4SVU1 1476 aa22.58■■□□□ 1.21
Prpf40b-212ENSMUST00000145482 PxdnQ3UQ28 1475 aa22.58■■□□□ 1.21
Prpf40b-212ENSMUST00000145482 P3h3Q8CG70 732 aa22.58■■□□□ 1.21
Prpf40b-212ENSMUST00000145482 Sin3aQ60520 1274 aaKnown RBP22.56■■□□□ 1.2
Prpf40b-212ENSMUST00000145482 Hspa5P20029 655 aaKnown RBP22.56■■□□□ 1.2
Prpf40b-212ENSMUST00000145482 Naip1Q9QWK5 1403 aa22.56■■□□□ 1.2
Prpf40b-212ENSMUST00000145482 Nup160Q9Z0W3 1402 aaKnown RBP22.55■■□□□ 1.2
Prpf40b-212ENSMUST00000145482 WrnO09053 1401 aa22.54■■□□□ 1.2
Prpf40b-212ENSMUST00000145482 Pcf11G3X9Z4 1553 aa22.54■■□□□ 1.2
Prpf40b-212ENSMUST00000145482 WizO88286 1684 aaKnown RBP22.53■■□□□ 1.2
Prpf40b-212ENSMUST00000145482 AknaQ80VW7 1404 aa22.51■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 Wdr43Q6ZQL4 677 aaKnown RBP22.51■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 Kif27Q7M6Z4 1394 aa22.49■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 Cc2d2bA0A286YDU8 1405 aa22.49■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 CntlnA2AM05 1397 aa22.48■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 Pak3Q61036 559 aa22.48■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 Slc4a3P16283 1227 aa22.47■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 Setd1bQ8CFT2 1985 aa22.47■■□□□ 1.19
Prpf40b-212ENSMUST00000145482 Polr1aO35134 1717 aaKnown RBP22.44■■□□□ 1.18
Prpf40b-212ENSMUST00000145482 Slx4Q6P1D7 1565 aa22.43■■□□□ 1.18
Prpf40b-212ENSMUST00000145482 Gpatch8A2A6A1 1505 aa22.43■■□□□ 1.18
Prpf40b-212ENSMUST00000145482 Tiam1Q60610 1591 aa22.42■■□□□ 1.18
Prpf40b-212ENSMUST00000145482 Chic2Q9D9G3 165 aa22.39■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 4933416C03RikQ3V063 378 aa22.38■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 Plcd4Q8K3R3 807 aa22.37■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 TchhA0A0B4J1F9 1599 aa22.37■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 Erich3F6QRE9 1637 aa22.36■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 Soga1E1U8D0 1418 aa22.35■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 Rusc2Q80U22 1514 aa22.34■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 Upf2A2AT37 1269 aaKnown RBP22.34■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 Lmo7E9PYF4 1699 aaKnown RBP22.33■■□□□ 1.17
Prpf40b-212ENSMUST00000145482 Adamts12Q811B3 1600 aa22.33■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Neo1P97798 1493 aa22.29■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Abca16E9PWJ7 1678 aa22.29■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Jph4Q80WT0 628 aa22.29■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms