RNA–Protein interactions for RNA: ENSMUST00000069174.5

Trim23-202, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 4,258 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-202ENSMUST00000069174 Disp1Q3TDN0 1521 aa7.91□□□□□ -1.14
Trim23-202ENSMUST00000069174 Grin2aP35436 1464 aa7.9□□□□□ -1.14
Trim23-202ENSMUST00000069174 Rusc2Q80U22 1514 aa7.9□□□□□ -1.15
Trim23-202ENSMUST00000069174 CenpbP27790 599 aa7.89□□□□□ -1.15
Trim23-202ENSMUST00000069174 Ifnlr1Q8CGK5 535 aa7.89□□□□□ -1.15
Trim23-202ENSMUST00000069174 Cep162Q6ZQ06 1403 aa7.89□□□□□ -1.15
Trim23-202ENSMUST00000069174 Fkbp15Q6P9Q6 1216 aaKnown RBP7.89□□□□□ -1.15
Trim23-202ENSMUST00000069174 SynmQ70IV5 1561 aa7.89□□□□□ -1.15
Trim23-202ENSMUST00000069174 Carmil1Q6EDY6 1374 aa7.89□□□□□ -1.15
Trim23-202ENSMUST00000069174 Fgd6Q69ZL1 1399 aa7.87□□□□□ -1.15
Trim23-202ENSMUST00000069174 Rpap1Q80TE0 1409 aa7.87□□□□□ -1.15
Trim23-202ENSMUST00000069174 Pbrm1Q8BSQ9 1634 aaKnown RBP7.87□□□□□ -1.15
Trim23-202ENSMUST00000069174 Mroh2bQ7M6Y6 1581 aa7.87□□□□□ -1.15
Trim23-202ENSMUST00000069174 Nup160Q9Z0W3 1402 aaKnown RBP7.85□□□□□ -1.15
Trim23-202ENSMUST00000069174 AqrQ8CFQ3 1481 aaKnown RBP7.85□□□□□ -1.15
Trim23-202ENSMUST00000069174 Arhgap35Q91YM2 1499 aa7.83□□□□□ -1.16
Trim23-202ENSMUST00000069174 Setd5Q5XJV7 1441 aa7.83□□□□□ -1.16
Trim23-202ENSMUST00000069174 Magi3Q9EQJ9 1476 aa7.83□□□□□ -1.16
Trim23-202ENSMUST00000069174 EprsQ8CGC7 1512 aaKnown RBP7.82□□□□□ -1.16
Trim23-202ENSMUST00000069174 Map3k1P53349 1493 aa7.82□□□□□ -1.16
Trim23-202ENSMUST00000069174 Pla2r1Q62028 1487 aa7.82□□□□□ -1.16
Trim23-202ENSMUST00000069174 TchhA0A0B4J1F9 1599 aa7.82□□□□□ -1.16
Trim23-202ENSMUST00000069174 ArxO35085 564 aa7.82□□□□□ -1.16
Trim23-202ENSMUST00000069174 Polr1aO35134 1717 aaKnown RBP7.82□□□□□ -1.16
Trim23-202ENSMUST00000069174 Soga1E1U8D0 1418 aa7.82□□□□□ -1.16
Trim23-202ENSMUST00000069174 Lmod2Q3UHZ5 550 aa7.8□□□□□ -1.16
Trim23-202ENSMUST00000069174 Eea1Q8BL66 1411 aa7.79□□□□□ -1.16
Trim23-202ENSMUST00000069174 CadpsQ80TJ1 1355 aa7.79□□□□□ -1.16
Trim23-202ENSMUST00000069174 Fyco1Q8VDC1 1437 aa7.79□□□□□ -1.16
Trim23-202ENSMUST00000069174 Myt1Q8CFC2 1127 aa7.79□□□□□ -1.16
Trim23-202ENSMUST00000069174 Gm7298A0A0N4SVU1 1476 aa7.78□□□□□ -1.16
Trim23-202ENSMUST00000069174 Ehmt2Q9Z148 1263 aaKnown RBP7.78□□□□□ -1.16
Trim23-202ENSMUST00000069174 WrnO09053 1401 aa7.77□□□□□ -1.17
Trim23-202ENSMUST00000069174 Shroom2A2ALU4 1481 aa7.77□□□□□ -1.17
Trim23-202ENSMUST00000069174 Neo1P97798 1493 aa7.77□□□□□ -1.17
Trim23-202ENSMUST00000069174 WizO88286 1684 aaKnown RBP7.77□□□□□ -1.17
Trim23-202ENSMUST00000069174 Jph4Q80WT0 628 aa7.76□□□□□ -1.17
Trim23-202ENSMUST00000069174 Gm14025A2AP89 1413 aa7.76□□□□□ -1.17
Trim23-202ENSMUST00000069174 Kif27Q7M6Z4 1394 aa7.75□□□□□ -1.17
Trim23-202ENSMUST00000069174 Plekhg3Q4VAC9 1341 aa7.75□□□□□ -1.17
Trim23-202ENSMUST00000069174 Aebp1Q640N1 1128 aa7.75□□□□□ -1.17
Trim23-202ENSMUST00000069174 PxdnQ3UQ28 1475 aa7.74□□□□□ -1.17
Trim23-202ENSMUST00000069174 Ppp1r18Q8BQ30 594 aa7.74□□□□□ -1.17
Trim23-202ENSMUST00000069174 1700123L14RikQ3V2K7 440 aa7.73□□□□□ -1.17
Trim23-202ENSMUST00000069174 Abcc1O35379 1528 aa7.73□□□□□ -1.17
Trim23-202ENSMUST00000069174 Gapvd1Q6PAR5 1458 aa7.72□□□□□ -1.17
Trim23-202ENSMUST00000069174 Dnajc5P60904 198 aa7.72□□□□□ -1.17
Trim23-202ENSMUST00000069174 Arid3cA6PWV5 409 aa7.72□□□□□ -1.17
Trim23-202ENSMUST00000069174 Cux1P53564 1515 aa7.71□□□□□ -1.17
Trim23-202ENSMUST00000069174 Setd1bQ8CFT2 1985 aa7.71□□□□□ -1.17
Trim23-202ENSMUST00000069174 UbtfP25976 765 aaKnown RBP7.71□□□□□ -1.18
Trim23-202ENSMUST00000069174 Ythdc2B2RR83 1445 aaKnown RBP7.7□□□□□ -1.18
Trim23-202ENSMUST00000069174 BlmO88700 1416 aa7.7□□□□□ -1.18
Trim23-202ENSMUST00000069174 Adamts12Q811B3 1600 aa7.7□□□□□ -1.18
Trim23-202ENSMUST00000069174 Abca16E9PWJ7 1678 aa7.7□□□□□ -1.18
Trim23-202ENSMUST00000069174 Gtf3c5Q8R2T8 520 aa7.7□□□□□ -1.18
Trim23-202ENSMUST00000069174 Gm156Q58A37 223 aa7.69□□□□□ -1.18
Trim23-202ENSMUST00000069174 Arhgap31A6X8Z5 1425 aa7.68□□□□□ -1.18
Trim23-202ENSMUST00000069174 Ncoa2Q61026 1462 aa7.67□□□□□ -1.18
Trim23-202ENSMUST00000069174 CntlnA2AM05 1397 aa7.67□□□□□ -1.18
Trim23-202ENSMUST00000069174 Pknox2Q8BG99 474 aa7.67□□□□□ -1.18
Trim23-202ENSMUST00000069174 Ccdc141E9Q8Q6 1531 aa7.67□□□□□ -1.18
Trim23-202ENSMUST00000069174 Adgrl3Q80TS3 1537 aa7.67□□□□□ -1.18
Trim23-202ENSMUST00000069174 Rsph4aQ8BYM7 716 aa7.66□□□□□ -1.18
Trim23-202ENSMUST00000069174 Map3k4O08648 1597 aa7.66□□□□□ -1.18
Trim23-202ENSMUST00000069174 Eif4g1Q6NZJ6 1600 aaKnown RBP7.66□□□□□ -1.18
Trim23-202ENSMUST00000069174 Ankrd26Q811D2 1581 aa7.66□□□□□ -1.18
Trim23-202ENSMUST00000069174 Cep170Q6A065 1588 aa7.66□□□□□ -1.18
Trim23-202ENSMUST00000069174 Abcc2Q8VI47 1543 aa7.65□□□□□ -1.18
Trim23-202ENSMUST00000069174 Abca5Q8K448 1642 aa7.65□□□□□ -1.19
Trim23-202ENSMUST00000069174 Dnmt1P13864 1620 aaKnown RBP7.65□□□□□ -1.19
Trim23-202ENSMUST00000069174 Dhx57Q6P5D3 1388 aaKnown RBP7.64□□□□□ -1.19
Trim23-202ENSMUST00000069174 Gpatch8A2A6A1 1505 aa7.64□□□□□ -1.19
Trim23-202ENSMUST00000069174 Col17a1Q07563 1470 aa7.64□□□□□ -1.19
Trim23-202ENSMUST00000069174 Arhgef12Q8R4H2 1543 aaKnown RBP7.64□□□□□ -1.19
Trim23-202ENSMUST00000069174 Slx4Q6P1D7 1565 aa7.63□□□□□ -1.19
Trim23-202ENSMUST00000069174 Igf1rQ60751 1373 aa7.62□□□□□ -1.19
Trim23-202ENSMUST00000069174 BC005561E9Q5E2 1589 aa7.62□□□□□ -1.19
Trim23-202ENSMUST00000069174 Neurod1Q60867 357 aa7.62□□□□□ -1.19
Trim23-202ENSMUST00000069174 Fam50aQ9WV03 339 aaKnown RBP7.62□□□□□ -1.19
Trim23-202ENSMUST00000069174 Pcf11G3X9Z4 1553 aa7.62□□□□□ -1.19
Trim23-202ENSMUST00000069174 Aplp2Q06335 707 aa7.62□□□□□ -1.19
Trim23-202ENSMUST00000069174 Arap1Q4LDD4 1452 aa7.61□□□□□ -1.19
Trim23-202ENSMUST00000069174 Zcchc11B2RX14 1644 aaKnown RBP7.61□□□□□ -1.19
Trim23-202ENSMUST00000069174 Cdk11bP24788 784 aaKnown RBP7.61□□□□□ -1.19
Trim23-202ENSMUST00000069174 Rrbp1Q99PL5 1605 aaKnown RBP7.6□□□□□ -1.19
Trim23-202ENSMUST00000069174 PtprtQ99M80 1454 aa7.59□□□□□ -1.19
Trim23-202ENSMUST00000069174 Chd1P40201 1711 aa7.59□□□□□ -1.19
Trim23-202ENSMUST00000069174 AI481877A2ALV5 1481 aa7.59□□□□□ -1.19
Trim23-202ENSMUST00000069174 TimelessQ9R1X4 1197 aa7.59□□□□□ -1.19
Trim23-202ENSMUST00000069174 Rapgef6Q5NCJ1 1609 aa7.58□□□□□ -1.2
Trim23-202ENSMUST00000069174 Eif5bQ05D44 1216 aaKnown RBP7.58□□□□□ -1.2
Trim23-202ENSMUST00000069174 Arhgef5E9Q7D5 1581 aa7.58□□□□□ -1.2
Trim23-202ENSMUST00000069174 Erich3F6QRE9 1637 aa7.58□□□□□ -1.2
Trim23-202ENSMUST00000069174 Magi1Q6RHR9 1471 aa7.58□□□□□ -1.2
Trim23-202ENSMUST00000069174 Atp10dQ8K2X1 1416 aa7.57□□□□□ -1.2
Trim23-202ENSMUST00000069174 Naip1Q9QWK5 1403 aa7.56□□□□□ -1.2
Trim23-202ENSMUST00000069174 Fancd2Q80V62 1450 aa7.56□□□□□ -1.2
Trim23-202ENSMUST00000069174 NclP09405 707 aaKnown RBP7.55□□□□□ -1.2
Trim23-202ENSMUST00000069174 Scaf1Q5U4C3 1256 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms