RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 MsnP26041 577 aaKnown RBP13.64□□□□□ -0.23
Col6a3-201ENSMUST00000056925 Eid3Q3V124 375 aa13.62□□□□□ -0.23
Col6a3-201ENSMUST00000056925 Hnrnpul2Q00PI9 745 aaKnown RBP13.61□□□□□ -0.23
Col6a3-201ENSMUST00000056925 Dnttip2Q8R2M2 758 aaKnown RBP13.61□□□□□ -0.23
Col6a3-201ENSMUST00000056925 Arid4bA2CG63 1314 aaKnown RBP13.58□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Calcoco2A2A6M5 331 aa13.58□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Map7d2A2AG50 781 aa13.58□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Prdm10Q3UTQ7 1184 aa13.57□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Q8BT18 775 aa13.56□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Ppm1gQ61074 542 aa13.56□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Lmod2Q3UHZ5 550 aa13.56□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Rad21Q61550 635 aaKnown RBP13.56□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Mak16Q8BGS0 296 aaKnown RBP13.55□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Erich6bQ9D4S6 220 aa13.53□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Hdac5Q9Z2V6 1113 aa13.53□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Erich6D3Z6S9 713 aa13.53□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Mrs2Q5NCE8 434 aa13.52□□□□□ -0.24
Col6a3-201ENSMUST00000056925 Rrp12Q6P5B0 1295 aaKnown RBP13.52□□□□□ -0.24
Col6a3-201ENSMUST00000056925 SetQ9EQU5 289 aaKnown RBP13.5□□□□□ -0.25
Col6a3-201ENSMUST00000056925 PrkcshO08795 521 aa13.5□□□□□ -0.25
Col6a3-201ENSMUST00000056925 Rangap1P46061 589 aaKnown RBP13.49□□□□□ -0.25
Col6a3-201ENSMUST00000056925 Spryd3E9Q9B3 442 aa13.47□□□□□ -0.25
Col6a3-201ENSMUST00000056925 4933402E13RikQ9D4D2 429 aa13.47□□□□□ -0.25
Col6a3-201ENSMUST00000056925 Gm13697A2AK42 830 aa13.46□□□□□ -0.25
Col6a3-201ENSMUST00000056925 Ccer2J3QPU5 274 aa13.46□□□□□ -0.25
Col6a3-201ENSMUST00000056925 Atp1b4Q99ME6 356 aa13.45□□□□□ -0.26
Col6a3-201ENSMUST00000056925 Fbxo2Q80UW2 297 aa13.45□□□□□ -0.26
Col6a3-201ENSMUST00000056925 Rtn4Q99P72 1162 aaKnown RBP13.45□□□□□ -0.26
Col6a3-201ENSMUST00000056925 Cep164Q5DU05 1446 aa13.44□□□□□ -0.26
Col6a3-201ENSMUST00000056925 Casc1Q6TDU8 730 aa13.42□□□□□ -0.26
Col6a3-201ENSMUST00000056925 Clip1Q922J3 1391 aa13.41□□□□□ -0.26
Col6a3-201ENSMUST00000056925 BccipQ9CWI3 316 aa13.41□□□□□ -0.26
Col6a3-201ENSMUST00000056925 Fgd1P52734 960 aa13.39□□□□□ -0.27
Col6a3-201ENSMUST00000056925 Trim26Q99PN3 545 aa13.39□□□□□ -0.27
Col6a3-201ENSMUST00000056925 SafbD3YXK2 937 aaKnown RBP13.39□□□□□ -0.27
Col6a3-201ENSMUST00000056925 Ofd1Q80Z25 1017 aa13.35□□□□□ -0.27
Col6a3-201ENSMUST00000056925 Ddrgk1Q80WW9 315 aa13.34□□□□□ -0.27
Col6a3-201ENSMUST00000056925 Ipo9Q91YE6 1041 aa13.34□□□□□ -0.27
Col6a3-201ENSMUST00000056925 Kiaa0754Q69ZZ9 979 aa13.34□□□□□ -0.27
Col6a3-201ENSMUST00000056925 VgfQ0VGU4 617 aa13.33□□□□□ -0.28
Col6a3-201ENSMUST00000056925 P3h3Q8CG70 732 aa13.32□□□□□ -0.28
Col6a3-201ENSMUST00000056925 Gm13695A2AK44 830 aa13.3□□□□□ -0.28
Col6a3-201ENSMUST00000056925 Map7O88735 730 aa13.3□□□□□ -0.28
Col6a3-201ENSMUST00000056925 Dnai1Q8C0M8 701 aa13.3□□□□□ -0.28
Col6a3-201ENSMUST00000056925 Gm973E9Q295 1059 aa13.29□□□□□ -0.28
Col6a3-201ENSMUST00000056925 PnnO35691 725 aaKnown RBP13.29□□□□□ -0.28
Col6a3-201ENSMUST00000056925 Becn1O88597 448 aa13.29□□□□□ -0.28
Col6a3-201ENSMUST00000056925 RdxP26043 583 aaKnown RBP13.29□□□□□ -0.28
Col6a3-201ENSMUST00000056925 IbspQ61711 324 aa13.28□□□□□ -0.28
Col6a3-201ENSMUST00000056925 Supt16hQ920B9 1047 aa13.28□□□□□ -0.28
Col6a3-201ENSMUST00000056925 Trim30aP15533 496 aa13.28□□□□□ -0.28
Col6a3-201ENSMUST00000056925 CalrP14211 416 aaKnown RBP13.26□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Pdcl3Q8BVF2 240 aa13.26□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Tcerg1Q8CGF7 1100 aaKnown RBP13.25□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Cald1E9QA15 768 aaKnown RBP13.25□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Gm35339A0A140LHH9 1649 aa13.24□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Abcc9P70170 1546 aa13.24□□□□□ -0.29
Col6a3-201ENSMUST00000056925 PtmsQ9D0J8 101 aaKnown RBP13.23□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Ush1cQ9ES64 910 aa13.23□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Aebp2Q9Z248 504 aaKnown RBP13.23□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Dusp9Q7TNL7 452 aa13.22□□□□□ -0.29
Col6a3-201ENSMUST00000056925 B4galnt3Q6L8S8 986 aa13.21□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Plcd4Q8K3R3 807 aa13.21□□□□□ -0.29
Col6a3-201ENSMUST00000056925 Mbd3Q9Z2D8 285 aaKnown RBP13.19□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Dbr1Q923B1 550 aa13.19□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Apbb1Q9QXJ1 710 aa13.19□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Slc4a3P16283 1227 aa13.18□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Fam43aQ8BUP8 424 aa13.17□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Gpatch11Q3UFS4 262 aa13.16□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Npm1Q61937 292 aaKnown RBP13.16□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Chmp4bQ9D8B3 224 aaKnown RBP13.15□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Brd4Q9ESU6 1400 aaKnown RBP13.15□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Rrp9Q91WM3 475 aaKnown RBP13.15□□□□□ -0.3
Col6a3-201ENSMUST00000056925 SlkO54988 1233 aa13.15□□□□□ -0.3
Col6a3-201ENSMUST00000056925 Znf771Q8BJ90 317 aa13.14□□□□□ -0.31
Col6a3-201ENSMUST00000056925 KnstrnQ9D9Z1 312 aaKnown RBP13.14□□□□□ -0.31
Col6a3-201ENSMUST00000056925 Ftsj3Q9DBE9 838 aaKnown RBP13.13□□□□□ -0.31
Col6a3-201ENSMUST00000056925 Wwc2Q6NXJ0 1187 aa13.12□□□□□ -0.31
Col6a3-201ENSMUST00000056925 Pcmtd1P59913 357 aa13.12□□□□□ -0.31
Col6a3-201ENSMUST00000056925 Gtf3c5Q8R2T8 520 aa13.11□□□□□ -0.31
Col6a3-201ENSMUST00000056925 MccE9PWI3 1003 aa13.1□□□□□ -0.31
Col6a3-201ENSMUST00000056925 Armcx1Q9CX83 456 aa13.1□□□□□ -0.31
Col6a3-201ENSMUST00000056925 BlmO88700 1416 aa13.1□□□□□ -0.31
Col6a3-201ENSMUST00000056925 Chic2Q9D9G3 165 aa13.09□□□□□ -0.31
Col6a3-201ENSMUST00000056925 Ipo4Q8VI75 1082 aa13.08□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Pes1Q9EQ61 584 aaKnown RBP13.08□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Ifnlr1Q8CGK5 535 aa13.08□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Taf3Q5HZG4 932 aa13.07□□□□□ -0.32
Col6a3-201ENSMUST00000056925 TimelessQ9R1X4 1197 aa13.07□□□□□ -0.32
Col6a3-201ENSMUST00000056925 EspnQ9ET47 871 aa13.06□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Mrvi1Q9WUX5 899 aaKnown RBP13.06□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Cwc15Q9JHS9 229 aaKnown RBP13.06□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Rgl3Q3UYI5 709 aa13.05□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Hsp90b1P08113 802 aaKnown RBP13.04□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Cspp1B2RX88 1205 aa13.04□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Clstn2Q9ER65 966 aa13.04□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Tpm2P58774 284 aa13.04□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Znf526Q8BI66 675 aa13.04□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Chmp5Q9D7S9 219 aa13.04□□□□□ -0.32
Col6a3-201ENSMUST00000056925 Zrsr2Q62377 462 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms