RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Fam135aQ6NS59 1506 aa20.46■□□□□ 0.87
Lime1-201ENSMUST00000048077 Carmil1Q6EDY6 1374 aa20.45■□□□□ 0.86
Lime1-201ENSMUST00000048077 Pcf11G3X9Z4 1553 aa20.44■□□□□ 0.86
Lime1-201ENSMUST00000048077 PogzQ8BZH4 1409 aaKnown RBP20.41■□□□□ 0.86
Lime1-201ENSMUST00000048077 LrpprcQ6PB66 1392 aaKnown RBP20.41■□□□□ 0.86
Lime1-201ENSMUST00000048077 Peg3Q3URU2 1571 aa20.4■□□□□ 0.86
Lime1-201ENSMUST00000048077 CntlnA2AM05 1397 aa20.38■□□□□ 0.85
Lime1-201ENSMUST00000048077 Anks4bQ8K3X6 423 aa20.38■□□□□ 0.85
Lime1-201ENSMUST00000048077 Slx4Q6P1D7 1565 aa20.37■□□□□ 0.85
Lime1-201ENSMUST00000048077 Npm1Q61937 292 aaKnown RBP20.36■□□□□ 0.85
Lime1-201ENSMUST00000048077 Duox2A2AQ99 1517 aa20.36■□□□□ 0.85
Lime1-201ENSMUST00000048077 BlmO88700 1416 aa20.36■□□□□ 0.85
Lime1-201ENSMUST00000048077 Ap3b1Q9Z1T1 1105 aa20.35■□□□□ 0.85
Lime1-201ENSMUST00000048077 Ubl4bQ9CQ84 188 aa20.34■□□□□ 0.85
Lime1-201ENSMUST00000048077 Cux1P53564 1515 aa20.33■□□□□ 0.85
Lime1-201ENSMUST00000048077 Polr1aO35134 1717 aaKnown RBP20.32■□□□□ 0.84
Lime1-201ENSMUST00000048077 Urb2E9Q7L1 1524 aaKnown RBP20.32■□□□□ 0.84
Lime1-201ENSMUST00000048077 SynmQ70IV5 1561 aa20.31■□□□□ 0.84
Lime1-201ENSMUST00000048077 Fyco1Q8VDC1 1437 aa20.29■□□□□ 0.84
Lime1-201ENSMUST00000048077 Rpap1Q80TE0 1409 aa20.28■□□□□ 0.84
Lime1-201ENSMUST00000048077 Cdk11bP24788 784 aaKnown RBP20.26■□□□□ 0.83
Lime1-201ENSMUST00000048077 Nop58Q6DFW4 536 aaKnown RBP20.25■□□□□ 0.83
Lime1-201ENSMUST00000048077 Samd9lQ69Z37 1561 aa20.22■□□□□ 0.83
Lime1-201ENSMUST00000048077 Fhad1A6PWD2 1420 aa20.18■□□□□ 0.82
Lime1-201ENSMUST00000048077 Mia2Q91ZV0 1396 aa20.17■□□□□ 0.82
Lime1-201ENSMUST00000048077 Dhx29Q6PGC1 1365 aaKnown RBP20.17■□□□□ 0.82
Lime1-201ENSMUST00000048077 Ccer2J3QPU5 274 aa20.15■□□□□ 0.82
Lime1-201ENSMUST00000048077 3425401B19RikD3Z1D3 1412 aa20.15■□□□□ 0.82
Lime1-201ENSMUST00000048077 Ankrd36D3Z4K0 1415 aa20.14■□□□□ 0.81
Lime1-201ENSMUST00000048077 Gm1043A0A140LJC2 1431 aa20.13■□□□□ 0.81
Lime1-201ENSMUST00000048077 Vps8Q0P5W1 1427 aa20.11■□□□□ 0.81
Lime1-201ENSMUST00000048077 Crocc2F6XLV1 1638 aa20.11■□□□□ 0.81
Lime1-201ENSMUST00000048077 Aebp1Q640N1 1128 aa20.1■□□□□ 0.81
Lime1-201ENSMUST00000048077 Eid3Q3V124 375 aa20.09■□□□□ 0.81
Lime1-201ENSMUST00000048077 UacaQ8CGB3 1411 aa20.09■□□□□ 0.81
Lime1-201ENSMUST00000048077 Kif21aQ9QXL2 1672 aa20.08■□□□□ 0.81
Lime1-201ENSMUST00000048077 Gm7298A0A0N4SVU1 1476 aa20.06■□□□□ 0.8
Lime1-201ENSMUST00000048077 Naip2Q9QUK4 1447 aa20.05■□□□□ 0.8
Lime1-201ENSMUST00000048077 Rad54l2Q99NG0 1466 aa20.04■□□□□ 0.8
Lime1-201ENSMUST00000048077 EprsQ8CGC7 1512 aaKnown RBP20.03■□□□□ 0.8
Lime1-201ENSMUST00000048077 Abca5Q8K448 1642 aa20.03■□□□□ 0.8
Lime1-201ENSMUST00000048077 Lmod2Q3UHZ5 550 aa20.02■□□□□ 0.8
Lime1-201ENSMUST00000048077 Lmtk2Q3TYD6 1471 aa20.02■□□□□ 0.79
Lime1-201ENSMUST00000048077 Fam50aQ9WV03 339 aaKnown RBP20.01■□□□□ 0.79
Lime1-201ENSMUST00000048077 Pla2r1Q62028 1487 aa20.01■□□□□ 0.79
Lime1-201ENSMUST00000048077 Ppargc1bQ8VHJ7 1014 aa19.99■□□□□ 0.79
Lime1-201ENSMUST00000048077 Mrc2Q64449 1479 aa19.98■□□□□ 0.79
Lime1-201ENSMUST00000048077 Camsap2Q8C1B1 1461 aa19.97■□□□□ 0.79
Lime1-201ENSMUST00000048077 Magi3Q9EQJ9 1476 aa19.96■□□□□ 0.79
Lime1-201ENSMUST00000048077 Gpatch8A2A6A1 1505 aa19.95■□□□□ 0.78
Lime1-201ENSMUST00000048077 Fhod3Q76LL6 1578 aa19.95■□□□□ 0.78
Lime1-201ENSMUST00000048077 CadpsQ80TJ1 1355 aa19.95■□□□□ 0.78
Lime1-201ENSMUST00000048077 A2mQ6GQT1 1474 aa19.94■□□□□ 0.78
Lime1-201ENSMUST00000048077 Gcc2Q8CHG3 1679 aa19.93■□□□□ 0.78
Lime1-201ENSMUST00000048077 Cul7Q8VE73 1689 aa19.91■□□□□ 0.78
Lime1-201ENSMUST00000048077 Adamts12Q811B3 1600 aa19.91■□□□□ 0.78
Lime1-201ENSMUST00000048077 Grin2aP35436 1464 aa19.89■□□□□ 0.77
Lime1-201ENSMUST00000048077 Csrnp3P59055 597 aa19.88■□□□□ 0.77
Lime1-201ENSMUST00000048077 Ccnb3Q810T2 1396 aa19.88■□□□□ 0.77
Lime1-201ENSMUST00000048077 Soga1E1U8D0 1418 aa19.85■□□□□ 0.77
Lime1-201ENSMUST00000048077 Kif27Q7M6Z4 1394 aa19.85■□□□□ 0.77
Lime1-201ENSMUST00000048077 Gm13697A2AK42 830 aa19.84■□□□□ 0.77
Lime1-201ENSMUST00000048077 Aplp2Q06335 707 aa19.84■□□□□ 0.77
Lime1-201ENSMUST00000048077 Dennd4bQ3U1Y4 1499 aa19.84■□□□□ 0.77
Lime1-201ENSMUST00000048077 NclP09405 707 aaKnown RBP19.83■□□□□ 0.76
Lime1-201ENSMUST00000048077 Disp1Q3TDN0 1521 aa19.82■□□□□ 0.76
Lime1-201ENSMUST00000048077 WizO88286 1684 aaKnown RBP19.82■□□□□ 0.76
Lime1-201ENSMUST00000048077 1700123L14RikQ3V2K7 440 aa19.82■□□□□ 0.76
Lime1-201ENSMUST00000048077 Rfx7F8VPJ6 1459 aa19.82■□□□□ 0.76
Lime1-201ENSMUST00000048077 Pbrm1Q8BSQ9 1634 aaKnown RBP19.82■□□□□ 0.76
Lime1-201ENSMUST00000048077 NexmifQ5DTT1 1515 aa19.8■□□□□ 0.76
Lime1-201ENSMUST00000048077 Plb1Q3TTY0 1478 aa19.79■□□□□ 0.76
Lime1-201ENSMUST00000048077 Hspa5P20029 655 aaKnown RBP19.79■□□□□ 0.76
Lime1-201ENSMUST00000048077 BC005561E9Q5E2 1589 aa19.77■□□□□ 0.76
Lime1-201ENSMUST00000048077 Naip5Q9R016 1403 aa19.77■□□□□ 0.75
Lime1-201ENSMUST00000048077 Setbp1Q9Z180 1582 aa19.75■□□□□ 0.75
Lime1-201ENSMUST00000048077 Setd1bQ8CFT2 1985 aa19.75■□□□□ 0.75
Lime1-201ENSMUST00000048077 Tnnt3Q9QZ47 272 aa19.74■□□□□ 0.75
Lime1-201ENSMUST00000048077 Ncoa2Q61026 1462 aa19.73■□□□□ 0.75
Lime1-201ENSMUST00000048077 Ift140E9PY46 1464 aa19.73■□□□□ 0.75
Lime1-201ENSMUST00000048077 Abca16E9PWJ7 1678 aa19.72■□□□□ 0.75
Lime1-201ENSMUST00000048077 Nup160Q9Z0W3 1402 aaKnown RBP19.71■□□□□ 0.75
Lime1-201ENSMUST00000048077 Stra8P70278 393 aa19.7■□□□□ 0.74
Lime1-201ENSMUST00000048077 PxdnQ3UQ28 1475 aa19.69■□□□□ 0.74
Lime1-201ENSMUST00000048077 Rapgef6Q5NCJ1 1609 aa19.67■□□□□ 0.74
Lime1-201ENSMUST00000048077 Mug1P28665 1476 aa19.67■□□□□ 0.74
Lime1-201ENSMUST00000048077 Chic2Q9D9G3 165 aa19.63■□□□□ 0.73
Lime1-201ENSMUST00000048077 WrnO09053 1401 aa19.62■□□□□ 0.73
Lime1-201ENSMUST00000048077 Abcc5Q9R1X5 1436 aa19.61■□□□□ 0.73
Lime1-201ENSMUST00000048077 Plekhh2Q8C115 1491 aa19.61■□□□□ 0.73
Lime1-201ENSMUST00000048077 Mphosph9A6H5Y1 991 aa19.61■□□□□ 0.73
Lime1-201ENSMUST00000048077 Ncoa3O09000 1398 aa19.6■□□□□ 0.73
Lime1-201ENSMUST00000048077 Lamc1P02468 1607 aaKnown RBP19.6■□□□□ 0.73
Lime1-201ENSMUST00000048077 Pprc1Q6NZN1 1644 aa19.6■□□□□ 0.73
Lime1-201ENSMUST00000048077 Cdc42bpaQ3UU96 1719 aa19.59■□□□□ 0.73
Lime1-201ENSMUST00000048077 Arhgef11Q68FM7 1552 aa19.59■□□□□ 0.73
Lime1-201ENSMUST00000048077 Ube2uB1AUC4 352 aa19.58■□□□□ 0.73
Lime1-201ENSMUST00000048077 Kiaa1551Q5DTW7 1521 aa19.57■□□□□ 0.72
Lime1-201ENSMUST00000048077 Cc2d2bA0A286YDU8 1405 aa19.57■□□□□ 0.72
Lime1-201ENSMUST00000048077 CenpbP27790 599 aa19.57■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms