RNA–Protein interactions for RNA: ENSMUST00000027438.7

Ncl-201, Transcript of Nucleolin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncl, Length 8,202 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncl-201ENSMUST00000027438 Upf2A2AT37 1269 aaKnown RBP9.24□□□□□ -0.93
Ncl-201ENSMUST00000027438 PnnO35691 725 aaKnown RBP9.23□□□□□ -0.93
Ncl-201ENSMUST00000027438 Bcl11bQ99PV8 884 aa9.23□□□□□ -0.93
Ncl-201ENSMUST00000027438 Plcb2A3KGF7 1181 aa9.23□□□□□ -0.93
Ncl-201ENSMUST00000027438 Sf3b2Q3UJB0 878 aaKnown RBP9.22□□□□□ -0.93
Ncl-201ENSMUST00000027438 Egfem1Q8C088 590 aa9.21□□□□□ -0.94
Ncl-201ENSMUST00000027438 Rsph4aQ8BYM7 716 aa9.18□□□□□ -0.94
Ncl-201ENSMUST00000027438 Vps53Q8CCB4 832 aa9.17□□□□□ -0.94
Ncl-201ENSMUST00000027438 Iqcf3Q9D498 203 aa9.16□□□□□ -0.94
Ncl-201ENSMUST00000027438 Kri1Q8VDQ9 704 aaKnown RBP9.15□□□□□ -0.94
Ncl-201ENSMUST00000027438 Abcc9P70170 1546 aa9.15□□□□□ -0.94
Ncl-201ENSMUST00000027438 Rad21Q61550 635 aaKnown RBP9.15□□□□□ -0.95
Ncl-201ENSMUST00000027438 Cnksr2Q80YA9 1032 aa9.15□□□□□ -0.95
Ncl-201ENSMUST00000027438 PtmaP26350 111 aa9.13□□□□□ -0.95
Ncl-201ENSMUST00000027438 Tomm22Q9CPQ3 142 aa9.12□□□□□ -0.95
Ncl-201ENSMUST00000027438 Plekhg3Q4VAC9 1341 aa9.12□□□□□ -0.95
Ncl-201ENSMUST00000027438 HdgfP51859 237 aaKnown RBP9.12□□□□□ -0.95
Ncl-201ENSMUST00000027438 Pes1Q9EQ61 584 aaKnown RBP9.11□□□□□ -0.95
Ncl-201ENSMUST00000027438 Dnai2A2AC93 623 aa9.11□□□□□ -0.95
Ncl-201ENSMUST00000027438 Ubl4bQ9CQ84 188 aa9.1□□□□□ -0.95
Ncl-201ENSMUST00000027438 Gm6268A2A3U9 297 aa9.1□□□□□ -0.95
Ncl-201ENSMUST00000027438 ArsiQ32KI9 573 aa9.1□□□□□ -0.95
Ncl-201ENSMUST00000027438 Arid3aQ62431 601 aa9.09□□□□□ -0.95
Ncl-201ENSMUST00000027438 Spryd3E9Q9B3 442 aa9.09□□□□□ -0.95
Ncl-201ENSMUST00000027438 Kif7B7ZNG0 1348 aa9.08□□□□□ -0.96
Ncl-201ENSMUST00000027438 AcrbpQ3V140 540 aa9.08□□□□□ -0.96
Ncl-201ENSMUST00000027438 BccipQ9CWI3 316 aa9.08□□□□□ -0.96
Ncl-201ENSMUST00000027438 Plagl1Q9JLQ4 704 aa9.08□□□□□ -0.96
Ncl-201ENSMUST00000027438 Taok2Q6ZQ29 1240 aa9.08□□□□□ -0.96
Ncl-201ENSMUST00000027438 IqubQ8CDK3 788 aa9.08□□□□□ -0.96
Ncl-201ENSMUST00000027438 Ccar1Q8CH18 1146 aaKnown RBP9.07□□□□□ -0.96
Ncl-201ENSMUST00000027438 Arid4bA2CG63 1314 aaKnown RBP9.07□□□□□ -0.96
Ncl-201ENSMUST00000027438 DaxxO35613 739 aa9.06□□□□□ -0.96
Ncl-201ENSMUST00000027438 Nol10Q5RJG1 687 aaKnown RBP9.05□□□□□ -0.96
Ncl-201ENSMUST00000027438 Mak16Q8BGS0 296 aaKnown RBP9.05□□□□□ -0.96
Ncl-201ENSMUST00000027438 Skida1Q80YR3 822 aa9.04□□□□□ -0.96
Ncl-201ENSMUST00000027438 Ppargc1bQ8VHJ7 1014 aa9.03□□□□□ -0.96
Ncl-201ENSMUST00000027438 Sh3bp5Q9Z131 463 aa9.03□□□□□ -0.96
Ncl-201ENSMUST00000027438 DekQ7TNV0 380 aaKnown RBP9.02□□□□□ -0.96
Ncl-201ENSMUST00000027438 Exosc9Q9JHI7 438 aaKnown RBP9.02□□□□□ -0.97
Ncl-201ENSMUST00000027438 Anapc15P60007 132 aa9□□□□□ -0.97
Ncl-201ENSMUST00000027438 Tnnt3Q9QZ47 272 aa8.99□□□□□ -0.97
Ncl-201ENSMUST00000027438 PrkcshO08795 521 aa8.99□□□□□ -0.97
Ncl-201ENSMUST00000027438 Zfp777B9EKF4 885 aa8.99□□□□□ -0.97
Ncl-201ENSMUST00000027438 1700019A02RikA0A087WPV9 146 aa8.99□□□□□ -0.97
Ncl-201ENSMUST00000027438 NischQ80TM9 1593 aa8.99□□□□□ -0.97
Ncl-201ENSMUST00000027438 Zcchc6Q5BLK4 1491 aaKnown RBP8.98□□□□□ -0.97
Ncl-201ENSMUST00000027438 MycnP03966 462 aaKnown RBP8.98□□□□□ -0.97
Ncl-201ENSMUST00000027438 Apbb1Q9QXJ1 710 aa8.98□□□□□ -0.97
Ncl-201ENSMUST00000027438 Ncbp3Q8BZR9 615 aaKnown RBP8.97□□□□□ -0.97
Ncl-201ENSMUST00000027438 Znf710Q3U288 666 aa8.96□□□□□ -0.98
Ncl-201ENSMUST00000027438 Pip4k2bQ80XI4 416 aa8.95□□□□□ -0.98
Ncl-201ENSMUST00000027438 Senp3Q9EP97 568 aaKnown RBP8.95□□□□□ -0.98
Ncl-201ENSMUST00000027438 Sugp2Q8CH09 1067 aa8.92□□□□□ -0.98
Ncl-201ENSMUST00000027438 Trim44Q9QXA7 346 aa8.92□□□□□ -0.98
Ncl-201ENSMUST00000027438 Nap1l2P51860 460 aa8.92□□□□□ -0.98
Ncl-201ENSMUST00000027438 Klf15Q9EPW2 415 aa8.92□□□□□ -0.98
Ncl-201ENSMUST00000027438 Pak3Q61036 559 aa8.91□□□□□ -0.98
Ncl-201ENSMUST00000027438 Clstn2Q9ER65 966 aa8.91□□□□□ -0.98
Ncl-201ENSMUST00000027438 Rbm19Q8R3C6 952 aaKnown RBP8.91□□□□□ -0.98
Ncl-201ENSMUST00000027438 Znf316Q6PGE4 1016 aa8.9□□□□□ -0.98
Ncl-201ENSMUST00000027438 Rassf8Q8CJ96 419 aa8.9□□□□□ -0.98
Ncl-201ENSMUST00000027438 Ca8P28651 291 aa8.9□□□□□ -0.98
Ncl-201ENSMUST00000027438 Cyb5rlB1AS42 316 aa8.9□□□□□ -0.98
Ncl-201ENSMUST00000027438 Csrnp3P59055 597 aa8.9□□□□□ -0.99
Ncl-201ENSMUST00000027438 Sox12Q04890 314 aa8.9□□□□□ -0.99
Ncl-201ENSMUST00000027438 TonslQ6NZL6 1363 aa8.89□□□□□ -0.99
Ncl-201ENSMUST00000027438 Psme1P97371 249 aa8.89□□□□□ -0.99
Ncl-201ENSMUST00000027438 Mier1Q5UAK0 511 aa8.88□□□□□ -0.99
Ncl-201ENSMUST00000027438 Stk3Q9JI10 497 aa8.87□□□□□ -0.99
Ncl-201ENSMUST00000027438 Srpk2O54781 681 aaKnown RBP8.87□□□□□ -0.99
Ncl-201ENSMUST00000027438 Kdm2aP59997 1161 aa8.87□□□□□ -0.99
Ncl-201ENSMUST00000027438 Odf2A3KGV1 830 aaKnown RBP8.86□□□□□ -0.99
Ncl-201ENSMUST00000027438 Kdm2bQ6P1G2 1309 aa8.86□□□□□ -0.99
Ncl-201ENSMUST00000027438 Dmrt2Q8BG36 561 aa8.85□□□□□ -0.99
Ncl-201ENSMUST00000027438 Pdcl3Q8BVF2 240 aa8.85□□□□□ -0.99
Ncl-201ENSMUST00000027438 Stag3O70576 1240 aa8.85□□□□□ -0.99
Ncl-201ENSMUST00000027438 Calr4Q3TQS0 420 aa8.85□□□□□ -0.99
Ncl-201ENSMUST00000027438 Utp3Q9JI13 469 aaKnown RBP8.84□□□□□ -0.99
Ncl-201ENSMUST00000027438 Cdca7Q9D0M2 382 aa8.84□□□□□ -0.99
Ncl-201ENSMUST00000027438 Stk24Q99KH8 431 aa8.83□□□□□ -1
Ncl-201ENSMUST00000027438 Rtf1A2AQ19 715 aaKnown RBP8.82□□□□□ -1
Ncl-201ENSMUST00000027438 Ppm1gQ61074 542 aa8.81□□□□□ -1
Ncl-201ENSMUST00000027438 Chmp3Q9CQ10 224 aa8.8□□□□□ -1
Ncl-201ENSMUST00000027438 Dhx16G3X8X0 1044 aaKnown RBP8.8□□□□□ -1
Ncl-201ENSMUST00000027438 Tmc1Q8R4P5 757 aa8.8□□□□□ -1
Ncl-201ENSMUST00000027438 Mapk8ip3Q9ESN9 1337 aa8.8□□□□□ -1
Ncl-201ENSMUST00000027438 GlmnQ8BZM1 596 aa8.8□□□□□ -1
Ncl-201ENSMUST00000027438 Gm20521D3Z5F7 333 aa8.8□□□□□ -1
Ncl-201ENSMUST00000027438 Txndc2Q6P902 515 aa8.79□□□□□ -1
Ncl-201ENSMUST00000027438 Tpm3-rs7D3Z2H9 248 aa8.79□□□□□ -1
Ncl-201ENSMUST00000027438 Plin1Q8CGN5 517 aa8.78□□□□□ -1
Ncl-201ENSMUST00000027438 Ccdc96Q9CR92 584 aa8.78□□□□□ -1
Ncl-201ENSMUST00000027438 Zcwpw1Q6IR42 630 aa8.78□□□□□ -1
Ncl-201ENSMUST00000027438 Arhgap27A2AB59 869 aa8.78□□□□□ -1
Ncl-201ENSMUST00000027438 Nop58Q6DFW4 536 aaKnown RBP8.78□□□□□ -1
Ncl-201ENSMUST00000027438 Tnnt1O88346 262 aa8.78□□□□□ -1
Ncl-201ENSMUST00000027438 Ddx11Q6AXC6 880 aa8.77□□□□□ -1.01
Ncl-201ENSMUST00000027438 Cbx1P83917 185 aaKnown RBP8.77□□□□□ -1.01
Ncl-201ENSMUST00000027438 Ccdc43Q9CR29 222 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms