RNA–Protein interactions for RNA: ENSMUST00000018744.14

Shmt1-201, Transcript of Serine hydroxymethyltransferase, cytosolic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shmt1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1-201ENSMUST00000018744 TonslQ6NZL6 1363 aa20.45■□□□□ 0.86
Shmt1-201ENSMUST00000018744 Arhgef5E9Q7D5 1581 aa20.44■□□□□ 0.86
Shmt1-201ENSMUST00000018744 Phldb1Q6PDH0 1371 aaKnown RBP20.43■□□□□ 0.86
Shmt1-201ENSMUST00000018744 Hnrnpul2Q00PI9 745 aaKnown RBP20.42■□□□□ 0.86
Shmt1-201ENSMUST00000018744 Mroh2bQ7M6Y6 1581 aa20.42■□□□□ 0.86
Shmt1-201ENSMUST00000018744 Baz1bQ9Z277 1479 aa20.37■□□□□ 0.85
Shmt1-201ENSMUST00000018744 Cux2P70298 1426 aa20.37■□□□□ 0.85
Shmt1-201ENSMUST00000018744 Ubl4bQ9CQ84 188 aa20.34■□□□□ 0.85
Shmt1-201ENSMUST00000018744 Npm1Q61937 292 aaKnown RBP20.32■□□□□ 0.84
Shmt1-201ENSMUST00000018744 Thoc2B1AZI6 1594 aaKnown RBP20.31■□□□□ 0.84
Shmt1-201ENSMUST00000018744 Tiam1Q60610 1591 aa20.29■□□□□ 0.84
Shmt1-201ENSMUST00000018744 Naip1Q9QWK5 1403 aa20.28■□□□□ 0.84
Shmt1-201ENSMUST00000018744 Ankrd26Q811D2 1581 aa20.27■□□□□ 0.84
Shmt1-201ENSMUST00000018744 AqrQ8CFQ3 1481 aaKnown RBP20.27■□□□□ 0.84
Shmt1-201ENSMUST00000018744 Efcab5A0JP43 1406 aa20.26■□□□□ 0.83
Shmt1-201ENSMUST00000018744 BlmO88700 1416 aa20.25■□□□□ 0.83
Shmt1-201ENSMUST00000018744 Erich3F6QRE9 1637 aa20.24■□□□□ 0.83
Shmt1-201ENSMUST00000018744 Kdm5bQ80Y84 1544 aa20.24■□□□□ 0.83
Shmt1-201ENSMUST00000018744 LrpprcQ6PB66 1392 aaKnown RBP20.24■□□□□ 0.83
Shmt1-201ENSMUST00000018744 Carmil1Q6EDY6 1374 aa20.2■□□□□ 0.82
Shmt1-201ENSMUST00000018744 PogzQ8BZH4 1409 aaKnown RBP20.19■□□□□ 0.82
Shmt1-201ENSMUST00000018744 Ifnlr1Q8CGK5 535 aa20.19■□□□□ 0.82
Shmt1-201ENSMUST00000018744 Duox2A2AQ99 1517 aa20.18■□□□□ 0.82
Shmt1-201ENSMUST00000018744 Pcf11G3X9Z4 1553 aa20.18■□□□□ 0.82
Shmt1-201ENSMUST00000018744 Eid3Q3V124 375 aa20.18■□□□□ 0.82
Shmt1-201ENSMUST00000018744 Cux1P53564 1515 aa20.15■□□□□ 0.82
Shmt1-201ENSMUST00000018744 Slx4Q6P1D7 1565 aa20.15■□□□□ 0.82
Shmt1-201ENSMUST00000018744 Tnnt3Q9QZ47 272 aa20.14■□□□□ 0.81
Shmt1-201ENSMUST00000018744 Fam135aQ6NS59 1506 aa20.13■□□□□ 0.81
Shmt1-201ENSMUST00000018744 TchhA0A0B4J1F9 1599 aa20.12■□□□□ 0.81
Shmt1-201ENSMUST00000018744 CntlnA2AM05 1397 aa20.11■□□□□ 0.81
Shmt1-201ENSMUST00000018744 Lmod2Q3UHZ5 550 aa20.1■□□□□ 0.81
Shmt1-201ENSMUST00000018744 Lmo7E9PYF4 1699 aaKnown RBP20.1■□□□□ 0.81
Shmt1-201ENSMUST00000018744 PrkcshO08795 521 aa20.09■□□□□ 0.81
Shmt1-201ENSMUST00000018744 Dhx29Q6PGC1 1365 aaKnown RBP20.04■□□□□ 0.8
Shmt1-201ENSMUST00000018744 Urb2E9Q7L1 1524 aaKnown RBP20.04■□□□□ 0.8
Shmt1-201ENSMUST00000018744 Fam50aQ9WV03 339 aaKnown RBP20.04■□□□□ 0.8
Shmt1-201ENSMUST00000018744 SynmQ70IV5 1561 aa20.02■□□□□ 0.8
Shmt1-201ENSMUST00000018744 Samd9lQ69Z37 1561 aa20.01■□□□□ 0.79
Shmt1-201ENSMUST00000018744 Fyco1Q8VDC1 1437 aa20.01■□□□□ 0.79
Shmt1-201ENSMUST00000018744 3425401B19RikD3Z1D3 1412 aa20.01■□□□□ 0.79
Shmt1-201ENSMUST00000018744 Aebp1Q640N1 1128 aa20.01■□□□□ 0.79
Shmt1-201ENSMUST00000018744 Rad54l2Q99NG0 1466 aa19.97■□□□□ 0.79
Shmt1-201ENSMUST00000018744 Anp32aO35381 247 aa19.97■□□□□ 0.79
Shmt1-201ENSMUST00000018744 Peg3Q3URU2 1571 aa19.94■□□□□ 0.78
Shmt1-201ENSMUST00000018744 Gm1043A0A140LJC2 1431 aa19.92■□□□□ 0.78
Shmt1-201ENSMUST00000018744 Rpap1Q80TE0 1409 aa19.92■□□□□ 0.78
Shmt1-201ENSMUST00000018744 Polr1aO35134 1717 aaKnown RBP19.9■□□□□ 0.78
Shmt1-201ENSMUST00000018744 Nolc1E9Q5C9 702 aaKnown RBP19.88■□□□□ 0.77
Shmt1-201ENSMUST00000018744 Fhad1A6PWD2 1420 aa19.86■□□□□ 0.77
Shmt1-201ENSMUST00000018744 Znf710Q3U288 666 aa19.86■□□□□ 0.77
Shmt1-201ENSMUST00000018744 Mia2Q91ZV0 1396 aa19.86■□□□□ 0.77
Shmt1-201ENSMUST00000018744 Gm7298A0A0N4SVU1 1476 aa19.85■□□□□ 0.77
Shmt1-201ENSMUST00000018744 Crocc2F6XLV1 1638 aa19.84■□□□□ 0.77
Shmt1-201ENSMUST00000018744 EprsQ8CGC7 1512 aaKnown RBP19.83■□□□□ 0.76
Shmt1-201ENSMUST00000018744 Ccer2J3QPU5 274 aa19.82■□□□□ 0.76
Shmt1-201ENSMUST00000018744 Naip2Q9QUK4 1447 aa19.81■□□□□ 0.76
Shmt1-201ENSMUST00000018744 Vps8Q0P5W1 1427 aa19.8■□□□□ 0.76
Shmt1-201ENSMUST00000018744 Pla2r1Q62028 1487 aa19.8■□□□□ 0.76
Shmt1-201ENSMUST00000018744 CadpsQ80TJ1 1355 aa19.78■□□□□ 0.76
Shmt1-201ENSMUST00000018744 Kif21aQ9QXL2 1672 aa19.78■□□□□ 0.76
Shmt1-201ENSMUST00000018744 Ankrd36D3Z4K0 1415 aa19.77■□□□□ 0.76
Shmt1-201ENSMUST00000018744 Mrc2Q64449 1479 aa19.77■□□□□ 0.76
Shmt1-201ENSMUST00000018744 NclP09405 707 aaKnown RBP19.77■□□□□ 0.75
Shmt1-201ENSMUST00000018744 Hspa5P20029 655 aaKnown RBP19.76■□□□□ 0.75
Shmt1-201ENSMUST00000018744 Calr4Q3TQS0 420 aa19.76■□□□□ 0.75
Shmt1-201ENSMUST00000018744 Magi3Q9EQJ9 1476 aa19.75■□□□□ 0.75
Shmt1-201ENSMUST00000018744 Gpatch8A2A6A1 1505 aa19.75■□□□□ 0.75
Shmt1-201ENSMUST00000018744 Ccnb3Q810T2 1396 aa19.75■□□□□ 0.75
Shmt1-201ENSMUST00000018744 A2mQ6GQT1 1474 aa19.75■□□□□ 0.75
Shmt1-201ENSMUST00000018744 UacaQ8CGB3 1411 aa19.73■□□□□ 0.75
Shmt1-201ENSMUST00000018744 Slc24a1Q91WD8 1130 aa19.73■□□□□ 0.75
Shmt1-201ENSMUST00000018744 Grin2aP35436 1464 aa19.7■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Kif27Q7M6Z4 1394 aa19.7■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Lmtk2Q3TYD6 1471 aa19.7■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Plb1Q3TTY0 1478 aa19.69■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Stra8P70278 393 aa19.69■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Chic2Q9D9G3 165 aa19.69■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Abca5Q8K448 1642 aa19.68■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Ttbk1Q6PCN3 1308 aa19.66■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Supt16hQ920B9 1047 aa19.66■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Disp1Q3TDN0 1521 aa19.66■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Dnajc5bQ9CQ94 199 aa19.65■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Dennd4bQ3U1Y4 1499 aa19.64■□□□□ 0.74
Shmt1-201ENSMUST00000018744 Ube2uB1AUC4 352 aa19.64■□□□□ 0.73
Shmt1-201ENSMUST00000018744 Rtl5Q5DTT4 599 aa19.63■□□□□ 0.73
Shmt1-201ENSMUST00000018744 Pelp1Q9DBD5 1123 aaKnown RBP19.61■□□□□ 0.73
Shmt1-201ENSMUST00000018744 WizO88286 1684 aaKnown RBP19.6■□□□□ 0.73
Shmt1-201ENSMUST00000018744 Adamts12Q811B3 1600 aa19.6■□□□□ 0.73
Shmt1-201ENSMUST00000018744 Soga1E1U8D0 1418 aa19.6■□□□□ 0.73
Shmt1-201ENSMUST00000018744 Gm13697A2AK42 830 aa19.6■□□□□ 0.73
Shmt1-201ENSMUST00000018744 Ppp4r2Q0VGB7 417 aa19.59■□□□□ 0.73
Shmt1-201ENSMUST00000018744 NexmifQ5DTT1 1515 aa19.58■□□□□ 0.73
Shmt1-201ENSMUST00000018744 BC005561E9Q5E2 1589 aa19.58■□□□□ 0.72
Shmt1-201ENSMUST00000018744 PxdnQ3UQ28 1475 aa19.56■□□□□ 0.72
Shmt1-201ENSMUST00000018744 Eif5bQ05D44 1216 aaKnown RBP19.54■□□□□ 0.72
Shmt1-201ENSMUST00000018744 Naip5Q9R016 1403 aa19.52■□□□□ 0.72
Shmt1-201ENSMUST00000018744 WrnO09053 1401 aa19.52■□□□□ 0.72
Shmt1-201ENSMUST00000018744 Gcc2Q8CHG3 1679 aa19.52■□□□□ 0.71
Shmt1-201ENSMUST00000018744 Ncoa2Q61026 1462 aa19.5■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms