RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Baz1bQ9Z277 1479 aa16.43■□□□□ 0.22
Vps54-201ENSMUST00000006221 Ankrd26Q811D2 1581 aa16.41■□□□□ 0.22
Vps54-201ENSMUST00000006221 Mapk8ip2Q9ERE9 830 aa16.41■□□□□ 0.22
Vps54-201ENSMUST00000006221 Ercc6F8VPZ5 1481 aa16.41■□□□□ 0.22
Vps54-201ENSMUST00000006221 Lmod2Q3UHZ5 550 aa16.41■□□□□ 0.22
Vps54-201ENSMUST00000006221 Fam50aQ9WV03 339 aaKnown RBP16.39■□□□□ 0.21
Vps54-201ENSMUST00000006221 Slx4Q6P1D7 1565 aa16.39■□□□□ 0.21
Vps54-201ENSMUST00000006221 Aplp2Q06335 707 aa16.38■□□□□ 0.21
Vps54-201ENSMUST00000006221 Pcf11G3X9Z4 1553 aa16.37■□□□□ 0.21
Vps54-201ENSMUST00000006221 TchhA0A0B4J1F9 1599 aa16.36■□□□□ 0.21
Vps54-201ENSMUST00000006221 Erich3F6QRE9 1637 aa16.36■□□□□ 0.21
Vps54-201ENSMUST00000006221 Cux1P53564 1515 aa16.31■□□□□ 0.2
Vps54-201ENSMUST00000006221 3425401B19RikD3Z1D3 1412 aa16.31■□□□□ 0.2
Vps54-201ENSMUST00000006221 Cux2P70298 1426 aa16.28■□□□□ 0.2
Vps54-201ENSMUST00000006221 Hnrnpul2Q00PI9 745 aaKnown RBP16.27■□□□□ 0.2
Vps54-201ENSMUST00000006221 Lmo7E9PYF4 1699 aaKnown RBP16.27■□□□□ 0.19
Vps54-201ENSMUST00000006221 NclP09405 707 aaKnown RBP16.26■□□□□ 0.19
Vps54-201ENSMUST00000006221 Npm1Q61937 292 aaKnown RBP16.24■□□□□ 0.19
Vps54-201ENSMUST00000006221 Rpap1Q80TE0 1409 aa16.24■□□□□ 0.19
Vps54-201ENSMUST00000006221 Hspa5P20029 655 aaKnown RBP16.24■□□□□ 0.19
Vps54-201ENSMUST00000006221 Carmil1Q6EDY6 1374 aa16.23■□□□□ 0.19
Vps54-201ENSMUST00000006221 CntlnA2AM05 1397 aa16.23■□□□□ 0.19
Vps54-201ENSMUST00000006221 Ubl4bQ9CQ84 188 aa16.21■□□□□ 0.19
Vps54-201ENSMUST00000006221 SafbD3YXK2 937 aaKnown RBP16.21■□□□□ 0.19
Vps54-201ENSMUST00000006221 CenpbP27790 599 aa16.21■□□□□ 0.18
Vps54-201ENSMUST00000006221 Efcab5A0JP43 1406 aa16.2■□□□□ 0.18
Vps54-201ENSMUST00000006221 Phldb1Q6PDH0 1371 aaKnown RBP16.2■□□□□ 0.18
Vps54-201ENSMUST00000006221 LrpprcQ6PB66 1392 aaKnown RBP16.19■□□□□ 0.18
Vps54-201ENSMUST00000006221 Duox2A2AQ99 1517 aa16.18■□□□□ 0.18
Vps54-201ENSMUST00000006221 Urb2E9Q7L1 1524 aaKnown RBP16.17■□□□□ 0.18
Vps54-201ENSMUST00000006221 Aebp1Q640N1 1128 aa16.16■□□□□ 0.18
Vps54-201ENSMUST00000006221 PogzQ8BZH4 1409 aaKnown RBP16.16■□□□□ 0.18
Vps54-201ENSMUST00000006221 Dhx29Q6PGC1 1365 aaKnown RBP16.16■□□□□ 0.18
Vps54-201ENSMUST00000006221 Fyco1Q8VDC1 1437 aa16.15■□□□□ 0.18
Vps54-201ENSMUST00000006221 Fhad1A6PWD2 1420 aa16.14■□□□□ 0.17
Vps54-201ENSMUST00000006221 Gm1043A0A140LJC2 1431 aa16.13■□□□□ 0.17
Vps54-201ENSMUST00000006221 UacaQ8CGB3 1411 aa16.12■□□□□ 0.17
Vps54-201ENSMUST00000006221 Gm7298A0A0N4SVU1 1476 aa16.11■□□□□ 0.17
Vps54-201ENSMUST00000006221 Mia2Q91ZV0 1396 aa16.1■□□□□ 0.17
Vps54-201ENSMUST00000006221 Naip2Q9QUK4 1447 aa16.1■□□□□ 0.17
Vps54-201ENSMUST00000006221 Samd9lQ69Z37 1561 aa16.09■□□□□ 0.17
Vps54-201ENSMUST00000006221 Znf710Q3U288 666 aa16.09■□□□□ 0.17
Vps54-201ENSMUST00000006221 Rad54l2Q99NG0 1466 aa16.09■□□□□ 0.17
Vps54-201ENSMUST00000006221 Vps8Q0P5W1 1427 aa16.08■□□□□ 0.17
Vps54-201ENSMUST00000006221 Peg3Q3URU2 1571 aa16.08■□□□□ 0.17
Vps54-201ENSMUST00000006221 Chic2Q9D9G3 165 aa16.08■□□□□ 0.16
Vps54-201ENSMUST00000006221 Ankrd36D3Z4K0 1415 aa16.08■□□□□ 0.16
Vps54-201ENSMUST00000006221 Sin3aQ60520 1274 aaKnown RBP16.07■□□□□ 0.16
Vps54-201ENSMUST00000006221 SynmQ70IV5 1561 aa16.07■□□□□ 0.16
Vps54-201ENSMUST00000006221 Gm13697A2AK42 830 aa16.06■□□□□ 0.16
Vps54-201ENSMUST00000006221 Tnnt3Q9QZ47 272 aa16.06■□□□□ 0.16
Vps54-201ENSMUST00000006221 A2mQ6GQT1 1474 aa16.06■□□□□ 0.16
Vps54-201ENSMUST00000006221 Thoc2B1AZI6 1594 aaKnown RBP16.06■□□□□ 0.16
Vps54-201ENSMUST00000006221 Ube2uB1AUC4 352 aa16.05■□□□□ 0.16
Vps54-201ENSMUST00000006221 Ccer2J3QPU5 274 aa16.05■□□□□ 0.16
Vps54-201ENSMUST00000006221 Dennd4bQ3U1Y4 1499 aa16.03■□□□□ 0.16
Vps54-201ENSMUST00000006221 Ccnb3Q810T2 1396 aa16.01■□□□□ 0.15
Vps54-201ENSMUST00000006221 Crocc2F6XLV1 1638 aa16■□□□□ 0.15
Vps54-201ENSMUST00000006221 Fam71e1A1L3C1 212 aa15.97■□□□□ 0.15
Vps54-201ENSMUST00000006221 Naip5Q9R016 1403 aa15.96■□□□□ 0.15
Vps54-201ENSMUST00000006221 Polr1aO35134 1717 aaKnown RBP15.95■□□□□ 0.14
Vps54-201ENSMUST00000006221 EprsQ8CGC7 1512 aaKnown RBP15.93■□□□□ 0.14
Vps54-201ENSMUST00000006221 Slc24a1Q91WD8 1130 aa15.93■□□□□ 0.14
Vps54-201ENSMUST00000006221 Gpatch8A2A6A1 1505 aa15.92■□□□□ 0.14
Vps54-201ENSMUST00000006221 Fam135aQ6NS59 1506 aa15.92■□□□□ 0.14
Vps54-201ENSMUST00000006221 Stra8P70278 393 aa15.92■□□□□ 0.14
Vps54-201ENSMUST00000006221 CadpsQ80TJ1 1355 aa15.91■□□□□ 0.14
Vps54-201ENSMUST00000006221 Pla2r1Q62028 1487 aa15.9■□□□□ 0.14
Vps54-201ENSMUST00000006221 Lmtk2Q3TYD6 1471 aa15.9■□□□□ 0.14
Vps54-201ENSMUST00000006221 Ncoa2Q61026 1462 aa15.9■□□□□ 0.14
Vps54-201ENSMUST00000006221 Smg6P61406 1418 aaKnown RBP15.89■□□□□ 0.13
Vps54-201ENSMUST00000006221 Kif27Q7M6Z4 1394 aa15.88■□□□□ 0.13
Vps54-201ENSMUST00000006221 Mphosph9A6H5Y1 991 aa15.87■□□□□ 0.13
Vps54-201ENSMUST00000006221 Camsap2Q8C1B1 1461 aa15.87■□□□□ 0.13
Vps54-201ENSMUST00000006221 Cul7Q8VE73 1689 aa15.87■□□□□ 0.13
Vps54-201ENSMUST00000006221 Zfp644E9QA22 1323 aa15.86■□□□□ 0.13
Vps54-201ENSMUST00000006221 NexmifQ5DTT1 1515 aa15.85■□□□□ 0.13
Vps54-201ENSMUST00000006221 BC005561E9Q5E2 1589 aa15.85■□□□□ 0.13
Vps54-201ENSMUST00000006221 Magi3Q9EQJ9 1476 aa15.84■□□□□ 0.13
Vps54-201ENSMUST00000006221 Cabp1Q9JLK7 227 aa15.84■□□□□ 0.13
Vps54-201ENSMUST00000006221 Abca5Q8K448 1642 aa15.83■□□□□ 0.12
Vps54-201ENSMUST00000006221 Kif21aQ9QXL2 1672 aa15.81■□□□□ 0.12
Vps54-201ENSMUST00000006221 Calr4Q3TQS0 420 aa15.8■□□□□ 0.12
Vps54-201ENSMUST00000006221 Myt1Q8CFC2 1127 aa15.8■□□□□ 0.12
Vps54-201ENSMUST00000006221 Fhod3Q76LL6 1578 aa15.79■□□□□ 0.12
Vps54-201ENSMUST00000006221 Grin2aP35436 1464 aa15.78■□□□□ 0.12
Vps54-201ENSMUST00000006221 WizO88286 1684 aaKnown RBP15.78■□□□□ 0.12
Vps54-201ENSMUST00000006221 Pkd2O35245 966 aa15.77■□□□□ 0.11
Vps54-201ENSMUST00000006221 Gcc2Q8CHG3 1679 aa15.77■□□□□ 0.11
Vps54-201ENSMUST00000006221 Usp47Q8BY87 1376 aa15.76■□□□□ 0.11
Vps54-201ENSMUST00000006221 Nolc1E9Q5C9 702 aaKnown RBP15.76■□□□□ 0.11
Vps54-201ENSMUST00000006221 Pprc1Q6NZN1 1644 aa15.76■□□□□ 0.11
Vps54-201ENSMUST00000006221 Mug1P28665 1476 aa15.76■□□□□ 0.11
Vps54-201ENSMUST00000006221 Abcc5Q9R1X5 1436 aa15.75■□□□□ 0.11
Vps54-201ENSMUST00000006221 PxdnQ3UQ28 1475 aa15.75■□□□□ 0.11
Vps54-201ENSMUST00000006221 Plb1Q3TTY0 1478 aa15.74■□□□□ 0.11
Vps54-201ENSMUST00000006221 Anp32aO35381 247 aa15.74■□□□□ 0.11
Vps54-201ENSMUST00000006221 Setbp1Q9Z180 1582 aa15.74■□□□□ 0.11
Vps54-201ENSMUST00000006221 Ncoa3O09000 1398 aa15.73■□□□□ 0.11
Vps54-201ENSMUST00000006221 Ift140E9PY46 1464 aa15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms