RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Slx4Q6P1D7 1565 aa24.25■■□□□ 1.47
Ctcf-201ENSMUST00000005841 Mapk8ip2Q9ERE9 830 aa24.24■■□□□ 1.47
Ctcf-201ENSMUST00000005841 Naip1Q9QWK5 1403 aa24.22■■□□□ 1.47
Ctcf-201ENSMUST00000005841 AqrQ8CFQ3 1481 aaKnown RBP24.22■■□□□ 1.47
Ctcf-201ENSMUST00000005841 Shroom4Q1W617 1475 aa24.22■■□□□ 1.47
Ctcf-201ENSMUST00000005841 Cul7Q8VE73 1689 aa24.22■■□□□ 1.47
Ctcf-201ENSMUST00000005841 Peg3Q3URU2 1571 aa24.18■■□□□ 1.46
Ctcf-201ENSMUST00000005841 Ncoa2Q61026 1462 aa24.18■■□□□ 1.46
Ctcf-201ENSMUST00000005841 Unc13aQ4KUS2 1712 aa24.17■■□□□ 1.46
Ctcf-201ENSMUST00000005841 Myt1lP97500 1187 aa24.16■■□□□ 1.46
Ctcf-201ENSMUST00000005841 Pcf11G3X9Z4 1553 aa24.16■■□□□ 1.46
Ctcf-201ENSMUST00000005841 Ankrd36D3Z4K0 1415 aa24.14■■□□□ 1.45
Ctcf-201ENSMUST00000005841 Crocc2F6XLV1 1638 aa24.13■■□□□ 1.45
Ctcf-201ENSMUST00000005841 3425401B19RikD3Z1D3 1412 aa24.11■■□□□ 1.45
Ctcf-201ENSMUST00000005841 Ap3b1Q9Z1T1 1105 aa24.1■■□□□ 1.45
Ctcf-201ENSMUST00000005841 Fhod3Q76LL6 1578 aa24.09■■□□□ 1.45
Ctcf-201ENSMUST00000005841 Pprc1Q6NZN1 1644 aa24.08■■□□□ 1.45
Ctcf-201ENSMUST00000005841 Mroh2bQ7M6Y6 1581 aa24.06■■□□□ 1.44
Ctcf-201ENSMUST00000005841 Atad2bE9Q166 1460 aaKnown RBP24.05■■□□□ 1.44
Ctcf-201ENSMUST00000005841 Eid3Q3V124 375 aa24.03■■□□□ 1.44
Ctcf-201ENSMUST00000005841 Anp32aO35381 247 aa24.02■■□□□ 1.44
Ctcf-201ENSMUST00000005841 Dennd4bQ3U1Y4 1499 aa24.01■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Dhx29Q6PGC1 1365 aaKnown RBP24.01■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Setd5Q5XJV7 1441 aa24.01■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Fhad1A6PWD2 1420 aa24■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Nolc1E9Q5C9 702 aaKnown RBP24■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Washc2Q6PGL7 1334 aa23.97■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Wdr62Q3U3T8 1523 aa23.97■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Thoc2B1AZI6 1594 aaKnown RBP23.96■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Gm13697A2AK42 830 aa23.96■■□□□ 1.43
Ctcf-201ENSMUST00000005841 Vps8Q0P5W1 1427 aa23.93■■□□□ 1.42
Ctcf-201ENSMUST00000005841 Frmpd1A2AKB4 1549 aa23.92■■□□□ 1.42
Ctcf-201ENSMUST00000005841 Npm2Q80W85 207 aa23.92■■□□□ 1.42
Ctcf-201ENSMUST00000005841 Efcab5A0JP43 1406 aa23.92■■□□□ 1.42
Ctcf-201ENSMUST00000005841 Grin2bQ01097 1482 aa23.91■■□□□ 1.42
Ctcf-201ENSMUST00000005841 Setbp1Q9Z180 1582 aa23.91■■□□□ 1.42
Ctcf-201ENSMUST00000005841 Naip5Q9R016 1403 aa23.9■■□□□ 1.42
Ctcf-201ENSMUST00000005841 Smg6P61406 1418 aaKnown RBP23.88■■□□□ 1.41
Ctcf-201ENSMUST00000005841 Naip2Q9QUK4 1447 aa23.87■■□□□ 1.41
Ctcf-201ENSMUST00000005841 Disp1Q3TDN0 1521 aa23.85■■□□□ 1.41
Ctcf-201ENSMUST00000005841 Ifnlr1Q8CGK5 535 aa23.85■■□□□ 1.41
Ctcf-201ENSMUST00000005841 Rtl5Q5DTT4 599 aa23.83■■□□□ 1.41
Ctcf-201ENSMUST00000005841 Cux1P53564 1515 aa23.81■■□□□ 1.4
Ctcf-201ENSMUST00000005841 Urb2E9Q7L1 1524 aaKnown RBP23.8■■□□□ 1.4
Ctcf-201ENSMUST00000005841 Stra8P70278 393 aa23.8■■□□□ 1.4
Ctcf-201ENSMUST00000005841 Calr4Q3TQS0 420 aa23.77■■□□□ 1.4
Ctcf-201ENSMUST00000005841 Supt16hQ920B9 1047 aa23.76■■□□□ 1.39
Ctcf-201ENSMUST00000005841 Gm1043A0A140LJC2 1431 aa23.75■■□□□ 1.39
Ctcf-201ENSMUST00000005841 Mia2Q91ZV0 1396 aa23.74■■□□□ 1.39
Ctcf-201ENSMUST00000005841 CntlnA2AM05 1397 aa23.74■■□□□ 1.39
Ctcf-201ENSMUST00000005841 BlmO88700 1416 aa23.73■■□□□ 1.39
Ctcf-201ENSMUST00000005841 Gm7298A0A0N4SVU1 1476 aa23.71■■□□□ 1.39
Ctcf-201ENSMUST00000005841 Hspa5P20029 655 aaKnown RBP23.67■■□□□ 1.38
Ctcf-201ENSMUST00000005841 Liat1Q810M6 228 aa23.67■■□□□ 1.38
Ctcf-201ENSMUST00000005841 Fyco1Q8VDC1 1437 aa23.66■■□□□ 1.38
Ctcf-201ENSMUST00000005841 A2mQ6GQT1 1474 aa23.65■■□□□ 1.38
Ctcf-201ENSMUST00000005841 Kif21aQ9QXL2 1672 aa23.64■■□□□ 1.38
Ctcf-201ENSMUST00000005841 Ccer2J3QPU5 274 aa23.64■■□□□ 1.37
Ctcf-201ENSMUST00000005841 PrkcshO08795 521 aa23.64■■□□□ 1.37
Ctcf-201ENSMUST00000005841 Lmtk2Q3TYD6 1471 aa23.64■■□□□ 1.37
Ctcf-201ENSMUST00000005841 Egfem1Q8C088 590 aa23.63■■□□□ 1.37
Ctcf-201ENSMUST00000005841 Pds5bQ4VA53 1446 aaKnown RBP23.63■■□□□ 1.37
Ctcf-201ENSMUST00000005841 Arhgef12Q8R4H2 1543 aaKnown RBP23.6■■□□□ 1.37
Ctcf-201ENSMUST00000005841 Kif21bQ9QXL1 1668 aa23.6■■□□□ 1.37
Ctcf-201ENSMUST00000005841 Ncoa1P70365 1447 aa23.59■■□□□ 1.37
Ctcf-201ENSMUST00000005841 Gcc2Q8CHG3 1679 aa23.57■■□□□ 1.36
Ctcf-201ENSMUST00000005841 NclP09405 707 aaKnown RBP23.56■■□□□ 1.36
Ctcf-201ENSMUST00000005841 SynmQ70IV5 1561 aa23.56■■□□□ 1.36
Ctcf-201ENSMUST00000005841 Carmil1Q6EDY6 1374 aa23.52■■□□□ 1.36
Ctcf-201ENSMUST00000005841 Kif15Q6P9L6 1387 aa23.46■■□□□ 1.35
Ctcf-201ENSMUST00000005841 Sin3aQ60520 1274 aaKnown RBP23.46■■□□□ 1.35
Ctcf-201ENSMUST00000005841 EprsQ8CGC7 1512 aaKnown RBP23.45■■□□□ 1.35
Ctcf-201ENSMUST00000005841 Lamc1P02468 1607 aaKnown RBP23.44■■□□□ 1.34
Ctcf-201ENSMUST00000005841 Pak3Q61036 559 aa23.44■■□□□ 1.34
Ctcf-201ENSMUST00000005841 Slc4a2P13808 1237 aaKnown RBP23.43■■□□□ 1.34
Ctcf-201ENSMUST00000005841 Abca5Q8K448 1642 aa23.42■■□□□ 1.34
Ctcf-201ENSMUST00000005841 Polr1aO35134 1717 aaKnown RBP23.4■■□□□ 1.34
Ctcf-201ENSMUST00000005841 Wdr43Q6ZQL4 677 aaKnown RBP23.39■■□□□ 1.33
Ctcf-201ENSMUST00000005841 Rfx7F8VPJ6 1459 aa23.38■■□□□ 1.33
Ctcf-201ENSMUST00000005841 Rprd2Q6NXI6 1469 aaKnown RBP23.36■■□□□ 1.33
Ctcf-201ENSMUST00000005841 Mbd5B1AYB6 1498 aa23.35■■□□□ 1.33
Ctcf-201ENSMUST00000005841 Mug1P28665 1476 aa23.35■■□□□ 1.33
Ctcf-201ENSMUST00000005841 Samd9lQ69Z37 1561 aa23.33■■□□□ 1.32
Ctcf-201ENSMUST00000005841 Ppp4r2Q0VGB7 417 aa23.32■■□□□ 1.32
Ctcf-201ENSMUST00000005841 Mink1Q9JM52 1308 aa23.32■■□□□ 1.32
Ctcf-201ENSMUST00000005841 Gm13695A2AK44 830 aa23.31■■□□□ 1.32
Ctcf-201ENSMUST00000005841 PnisrA2AJT4 805 aaKnown RBP23.3■■□□□ 1.32
Ctcf-201ENSMUST00000005841 Tubgcp6G5E8P0 1769 aa23.29■■□□□ 1.32
Ctcf-201ENSMUST00000005841 Fam50aQ9WV03 339 aaKnown RBP23.28■■□□□ 1.32
Ctcf-201ENSMUST00000005841 PogzQ8BZH4 1409 aaKnown RBP23.25■■□□□ 1.31
Ctcf-201ENSMUST00000005841 Duox2A2AQ99 1517 aa23.23■■□□□ 1.31
Ctcf-201ENSMUST00000005841 Aebp1Q640N1 1128 aa23.22■■□□□ 1.31
Ctcf-201ENSMUST00000005841 Kif14L0N7N1 1674 aaKnown RBP23.21■■□□□ 1.31
Ctcf-201ENSMUST00000005841 Hdac5Q9Z2V6 1113 aa23.21■■□□□ 1.31
Ctcf-201ENSMUST00000005841 Pik3c2gO70167 1506 aa23.21■■□□□ 1.31
Ctcf-201ENSMUST00000005841 SphkapQ6NSW3 1687 aa23.19■■□□□ 1.3
Ctcf-201ENSMUST00000005841 Myom3A2ABU4 1439 aa23.19■■□□□ 1.3
Ctcf-201ENSMUST00000005841 Upf2A2AT37 1269 aaKnown RBP23.19■■□□□ 1.3
Ctcf-201ENSMUST00000005841 Gpatch8A2A6A1 1505 aa23.18■■□□□ 1.3
Ctcf-201ENSMUST00000005841 Pelp1Q9DBD5 1123 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms