RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
EWSR1-206ENST00000397938 AKAP6Q13023 2319 aa12.69□□□□□ -0.38
EWSR1-206ENST00000397938 IGHV3-73A0A0B4J1V6 119 aa12.68□□□□□ -0.38
EWSR1-206ENST00000397938 SPTAN1Q13813 2472 aaKnown RBP12.68□□□□□ -0.38
EWSR1-206ENST00000397938 NBL1P41271 181 aa12.68□□□□□ -0.38
EWSR1-206ENST00000397938 TIMM17BO60830 172 aa12.67□□□□□ -0.38
EWSR1-206ENST00000397938 PROK1P58294 105 aa12.67□□□□□ -0.38
EWSR1-206ENST00000397938 RNF152Q8N8N0 203 aa12.67□□□□□ -0.38
EWSR1-206ENST00000397938 IGHV4-61A0A0C4DH41 118 aa12.67□□□□□ -0.38
EWSR1-206ENST00000397938 TMEM95Q3KNT9 176 aa12.66□□□□□ -0.38
EWSR1-206ENST00000397938 DUX3Q96PT4 197 aa12.66□□□□□ -0.38
EWSR1-206ENST00000397938 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
EWSR1-206ENST00000397938 UBE2D4Q9Y2X8 147 aa12.66□□□□□ -0.38
EWSR1-206ENST00000397938 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
EWSR1-206ENST00000397938 PSMB8P28062 276 aa12.66□□□□□ -0.38
EWSR1-206ENST00000397938 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
EWSR1-206ENST00000397938 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
EWSR1-206ENST00000397938 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
EWSR1-206ENST00000397938 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
EWSR1-206ENST00000397938 DOPEY2Q9Y3R5 2298 aa12.65□□□□□ -0.38
EWSR1-206ENST00000397938 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
EWSR1-206ENST00000397938 ATRXP46100 2492 aa12.64□□□□□ -0.39
EWSR1-206ENST00000397938 PIMREGQ9BSJ6 248 aa12.63□□□□□ -0.39
EWSR1-206ENST00000397938 Q9UF83 564 aa12.63□□□□□ -0.39
EWSR1-206ENST00000397938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.62□□□□□ -0.39
EWSR1-206ENST00000397938 IGKV2-29A2NJV5 120 aaPredicted RBP12.62□□□□□ -0.39
EWSR1-206ENST00000397938 DAND5Q8N907 189 aa12.62□□□□□ -0.39
EWSR1-206ENST00000397938 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
EWSR1-206ENST00000397938 NACAE9PAV3 2078 aa12.62□□□□□ -0.39
EWSR1-206ENST00000397938 NDUFA1O15239 70 aa12.62□□□□□ -0.39
EWSR1-206ENST00000397938 C10orf99Q6UWK7 81 aa12.61□□□□□ -0.39
EWSR1-206ENST00000397938 LINC00467Q9BRT7 94 aa12.61□□□□□ -0.39
EWSR1-206ENST00000397938 KNCNA6PVL3 124 aa12.61□□□□□ -0.39
EWSR1-206ENST00000397938 HTN1P15515 57 aa12.61□□□□□ -0.39
EWSR1-206ENST00000397938 CITED2Q99967 270 aaPredicted RBP12.61□□□□□ -0.39
EWSR1-206ENST00000397938 Q6ZSN1 163 aa12.6□□□□□ -0.39
EWSR1-206ENST00000397938 CDKN2A-AS1Q9UH64 79 aa12.6□□□□□ -0.39
EWSR1-206ENST00000397938 FAM110AQ9BQ89 295 aa12.6□□□□□ -0.39
EWSR1-206ENST00000397938 IGLV5-45A0A087WSX0 123 aa12.59□□□□□ -0.39
EWSR1-206ENST00000397938 UCNP55089 124 aa12.59□□□□□ -0.39
EWSR1-206ENST00000397938 SYNJ2BPP57105 145 aa12.59□□□□□ -0.39
EWSR1-206ENST00000397938 MEIG1Q5JSS6 88 aa12.59□□□□□ -0.39
EWSR1-206ENST00000397938 MUC6Q6W4X9 2439 aa12.59□□□□□ -0.39
EWSR1-206ENST00000397938 C19orf84I3L1E1 186 aa12.59□□□□□ -0.39
EWSR1-206ENST00000397938 TMEM101Q96IK0 257 aa12.59□□□□□ -0.39
EWSR1-206ENST00000397938 TIRAPP58753 221 aa12.58□□□□□ -0.4
EWSR1-206ENST00000397938 C10orf105Q8TEF2 133 aa12.58□□□□□ -0.4
EWSR1-206ENST00000397938 CHCHD5Q9BSY4 110 aa12.58□□□□□ -0.4
EWSR1-206ENST00000397938 SMIM20Q8N5G0 67 aa12.58□□□□□ -0.4
EWSR1-206ENST00000397938 VPS13CQ709C8 3753 aa12.58□□□□□ -0.4
EWSR1-206ENST00000397938 PIK3CD-AS1Q5SR53 167 aa12.57□□□□□ -0.4
EWSR1-206ENST00000397938 LINC00308Q8TCZ7 52 aa12.57□□□□□ -0.4
EWSR1-206ENST00000397938 ACYP1P07311 99 aa12.57□□□□□ -0.4
EWSR1-206ENST00000397938 CIRBPQ14011 172 aaKnown RBP12.57□□□□□ -0.4
EWSR1-206ENST00000397938 SORL1Q92673 2214 aa12.57□□□□□ -0.4
EWSR1-206ENST00000397938 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
EWSR1-206ENST00000397938 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.56□□□□□ -0.4
EWSR1-206ENST00000397938 COX7A2LO14548 114 aa12.56□□□□□ -0.4
EWSR1-206ENST00000397938 IGHV3-38A0A0C4DH36 116 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 PRM2P04554 102 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 MSMBP08118 114 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 DNAJC30Q96LL9 226 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 DUX5Q96PT3 197 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 IGF2RP11717 2491 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 IMUPQ9GZP8 106 aa12.55□□□□□ -0.4
EWSR1-206ENST00000397938 IGLV5-39A0A0G2JS06 123 aa12.54□□□□□ -0.4
EWSR1-206ENST00000397938 A8MTW9 85 aa12.54□□□□□ -0.4
EWSR1-206ENST00000397938 AVPP01185 164 aa12.54□□□□□ -0.4
EWSR1-206ENST00000397938 Q9H8V8 135 aa12.54□□□□□ -0.4
EWSR1-206ENST00000397938 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
EWSR1-206ENST00000397938 RBMY1BA6NDE4 496 aaKnown RBP12.53□□□□□ -0.4
EWSR1-206ENST00000397938 RBMY1EA6NEQ0 496 aaKnown RBP12.53□□□□□ -0.4
EWSR1-206ENST00000397938 RBMY1DP0C7P1 496 aaKnown RBP12.53□□□□□ -0.4
EWSR1-206ENST00000397938 COX6A2Q02221 97 aa12.53□□□□□ -0.4
EWSR1-206ENST00000397938 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
EWSR1-206ENST00000397938 SHISA2Q6UWI4 295 aa12.53□□□□□ -0.4
EWSR1-206ENST00000397938 IGHV4-30-2A0A087WSY4 118 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 FAM236AA0A1B0GUQ0 79 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 FAM236BA0A1B0GV22 79 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 HOXD3P31249 432 aaPredicted RBP12.52□□□□□ -0.41
EWSR1-206ENST00000397938 DEFB131AP59861 70 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 HERV-K104P63124 156 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 LINC01587Q99440 93 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 PRORYQ9H606 182 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 IGHV3OR16-12A0A075B7B8 117 aa12.52□□□□□ -0.41
EWSR1-206ENST00000397938 SOSTDC1Q6X4U4 206 aa12.51□□□□□ -0.41
EWSR1-206ENST00000397938 SMCR5Q8TEV8 140 aa12.51□□□□□ -0.41
EWSR1-206ENST00000397938 HERVK_113P63121 156 aa12.51□□□□□ -0.41
EWSR1-206ENST00000397938 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
EWSR1-206ENST00000397938 Q8N2B8 174 aa12.51□□□□□ -0.41
EWSR1-206ENST00000397938 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
EWSR1-206ENST00000397938 COL12A1Q99715 3063 aa12.5□□□□□ -0.41
EWSR1-206ENST00000397938 COPS9Q8WXC6 57 aa12.5□□□□□ -0.41
EWSR1-206ENST00000397938 CCL19Q99731 98 aa12.5□□□□□ -0.41
EWSR1-206ENST00000397938 A0A0U1RRA0 63 aa12.5□□□□□ -0.41
EWSR1-206ENST00000397938 BEAN1Q3B7T3 259 aa12.5□□□□□ -0.41
EWSR1-206ENST00000397938 LINC00242Q5T6M2 205 aa12.5□□□□□ -0.41
EWSR1-206ENST00000397938 TMEM126AQ9H061 195 aa12.5□□□□□ -0.41
EWSR1-206ENST00000397938 TRACP01848 142 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms