RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.11■□□□□ 0.652e-7■■■■■ 64.2
EWSR1-206ENST00000397938 RBM22Q9NW64 420 aaKnown RBP eCLIP17.27■□□□□ 0.366e-13■■■■■ 61.1
EWSR1-206ENST00000397938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.1■□□□□ 0.172e-10■■■■■ 42.1
EWSR1-206ENST00000397938 PCBP2Q15366 365 aaKnown RBP eCLIP16.99■□□□□ 0.312e-87■■■■■ 42
EWSR1-206ENST00000397938 FKBP4Q02790 459 aaKnown RBP eCLIP19.89■□□□□ 0.778e-8■■■■■ 39.6
EWSR1-206ENST00000397938 SUB1P53999 127 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■■■■ 38.7
EWSR1-206ENST00000397938 TIAL1Q01085 375 aaKnown RBP eCLIP17.22■□□□□ 0.351e-10■■■■■ 38.1
EWSR1-206ENST00000397938 SF3B1O75533 1304 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■■■■■ 32.2
EWSR1-206ENST00000397938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■■■■■ 29.8
EWSR1-206ENST00000397938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.47□□□□□ -0.412e-8■■■■□ 24.7
EWSR1-206ENST00000397938 EFTUD2Q15029 972 aaKnown RBP eCLIP18.27■□□□□ 0.522e-7■■■■□ 24.4
EWSR1-206ENST00000397938 NONOQ15233 471 aaKnown RBP eCLIP19.1■□□□□ 0.656e-6■■■■□ 21
EWSR1-206ENST00000397938 U2AF2P26368 475 aaKnown RBP eCLIP20.65■□□□□ 0.92e-12■■■■□ 20.7
EWSR1-206ENST00000397938 SF3B4Q15427 424 aaKnown RBP eCLIP17.05■□□□□ 0.321e-8■■■■□ 20.4
EWSR1-206ENST00000397938 LARP4Q71RC2 724 aaKnown RBP eCLIP17.44■□□□□ 0.383e-8■■■■□ 20
EWSR1-206ENST00000397938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.2■□□□□ 0.822e-8■■■■□ 19.6
EWSR1-206ENST00000397938 SRSF1Q07955 248 aaKnown RBP eCLIP13.48□□□□□ -0.254e-9■■■□□ 18.9
EWSR1-206ENST00000397938 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.482e-7■■■□□ 18.8
EWSR1-206ENST00000397938 QKIQ96PU8 341 aaKnown RBP eCLIP17.79■□□□□ 0.449e-9■■■□□ 18.6
EWSR1-206ENST00000397938 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.39■□□□□ 0.376e-6■■■□□ 18.3
EWSR1-206ENST00000397938 SRSF7Q16629 238 aaKnown RBP eCLIP14.88□□□□□ -0.038e-6■■■□□ 18
EWSR1-206ENST00000397938 RBFOX2O43251 390 aaKnown RBP eCLIP14.56□□□□□ -0.085e-9■■■□□ 17.5
EWSR1-206ENST00000397938 KHSRPQ92945 711 aaKnown RBP eCLIP17.73■□□□□ 0.433e-8■■■□□ 16.6
EWSR1-206ENST00000397938 TARDBPQ13148 414 aaKnown RBP eCLIP16.54■□□□□ 0.244e-11■■■□□ 16.4
EWSR1-206ENST00000397938 SF3A3Q12874 501 aaKnown RBP eCLIP18.78■□□□□ 0.66e-7■■■□□ 16.1
EWSR1-206ENST00000397938 SMNDC1O75940 238 aaKnown RBP eCLIP18.63■□□□□ 0.576e-11■■■□□ 15.9
EWSR1-206ENST00000397938 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.58■□□□□ 0.242e-16■■■□□ 15.7
EWSR1-206ENST00000397938 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.964e-6■■■□□ 14.7
EWSR1-206ENST00000397938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.44■□□□□ 0.223e-6■■□□□ 14.3
EWSR1-206ENST00000397938 PUM1Q14671 1186 aaKnown RBP eCLIP16.53■□□□□ 0.243e-10■■□□□ 14.1
EWSR1-206ENST00000397938 PABPC4Q13310 644 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■□□□ 14.1
EWSR1-206ENST00000397938 RPS3P23396 243 aaKnown RBP eCLIP16.81■□□□□ 0.287e-9■■□□□ 13.8
EWSR1-206ENST00000397938 FMR1Q06787 632 aaKnown RBP eCLIP19.86■□□□□ 0.772e-6■■□□□ 13.2
EWSR1-206ENST00000397938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.51■■□□□ 1.193e-7■■□□□ 13.2
EWSR1-206ENST00000397938 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■□□□ 12.8
EWSR1-206ENST00000397938 YBX3P16989 372 aaKnown RBP eCLIP17.61■□□□□ 0.415e-9■■□□□ 12.8
EWSR1-206ENST00000397938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.768e-9■■□□□ 12.6
EWSR1-206ENST00000397938 ZNF622Q969S3 477 aaKnown RBP eCLIP18.72■□□□□ 0.595e-8■■□□□ 12.4
EWSR1-206ENST00000397938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.08■□□□□ 0.979e-7■■□□□ 12.4
EWSR1-206ENST00000397938 HNRNPKP61978 463 aaKnown RBP eCLIP14.95□□□□□ -0.028e-8■■□□□ 12.4
EWSR1-206ENST00000397938 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.32■□□□□ 0.524e-8■■□□□ 12.1
EWSR1-206ENST00000397938 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.635e-8■■□□□ 12.1
EWSR1-206ENST00000397938 LSM11P83369 360 aaKnown RBP eCLIP16.38■□□□□ 0.213e-8■■□□□ 12
EWSR1-206ENST00000397938 U2AF1Q01081 240 aaKnown RBP eCLIP21.83■■□□□ 1.091e-11■■□□□ 12
EWSR1-206ENST00000397938 CSTF2P33240 577 aaKnown RBP eCLIP16.64■□□□□ 0.251e-7■■□□□ 12
EWSR1-206ENST00000397938 G3BP1Q13283 466 aaKnown RBP eCLIP20.38■□□□□ 0.853e-7■■□□□ 11.5
EWSR1-206ENST00000397938 FXR2P51116 673 aaKnown RBP eCLIP19.03■□□□□ 0.642e-9■■□□□ 11.4
EWSR1-206ENST00000397938 ZC3H11AO75152 810 aaKnown RBP eCLIP18.27■□□□□ 0.521e-8■■□□□ 11.4
EWSR1-206ENST00000397938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.56e-6■□□□□ 11
EWSR1-206ENST00000397938 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.76■□□□□ 0.758e-7■□□□□ 10.7
EWSR1-206ENST00000397938 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.638e-9■□□□□ 10.7
EWSR1-206ENST00000397938 TRA2AQ13595 282 aaKnown RBP eCLIP14.43□□□□□ -0.13e-7■□□□□ 10.7
EWSR1-206ENST00000397938 SND1Q7KZF4 910 aaKnown RBP eCLIP19.39■□□□□ 0.79e-7■□□□□ 10.4
EWSR1-206ENST00000397938 PPIGQ13427 754 aaKnown RBP eCLIP16.76■□□□□ 0.276e-10■□□□□ 10.2
EWSR1-206ENST00000397938 FXR1P51114 621 aaKnown RBP eCLIP19.68■□□□□ 0.743e-6■□□□□ 10.2
EWSR1-206ENST00000397938 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.351e-9■□□□□ 9.6
EWSR1-206ENST00000397938 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.34■□□□□ 0.853e-13■□□□□ 9.4
EWSR1-206ENST00000397938 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.675e-7■□□□□ 9.3
EWSR1-206ENST00000397938 PRPF4O43172 522 aaKnown RBP eCLIP18.45■□□□□ 0.544e-7■□□□□ 9.2
EWSR1-206ENST00000397938 RBM15Q96T37 977 aaKnown RBP eCLIP18.42■□□□□ 0.544e-10■□□□□ 9.2
EWSR1-206ENST00000397938 GRSF1Q12849 480 aaKnown RBP eCLIP17.42■□□□□ 0.389e-13■□□□□ 9.1
EWSR1-206ENST00000397938 HNRNPCP07910 306 aaKnown RBP eCLIP17.67■□□□□ 0.423e-7■□□□□ 9
EWSR1-206ENST00000397938 TIA1P31483 386 aaKnown RBP eCLIP16.56■□□□□ 0.243e-6■□□□□ 8.9
EWSR1-206ENST00000397938 AGGF1Q8N302 714 aaeCLIP18.53■□□□□ 0.564e-6■□□□□ 8.7
EWSR1-206ENST00000397938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.14■□□□□ 0.491e-9■□□□□ 8.3
Retrieved 65 of 65 RNA–protein pairs in 11.7 ms