RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
SPTLC2-202ENST00000554365 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
SPTLC2-202ENST00000554365 RNF185Q96GF1 192 aa9.72□□□□□ -0.85
SPTLC2-202ENST00000554365 ZNF479Q96JC4 524 aa9.72□□□□□ -0.85
SPTLC2-202ENST00000554365 TMEM191AQ9H0A3 160 aa9.72□□□□□ -0.85
SPTLC2-202ENST00000554365 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.86
SPTLC2-202ENST00000554365 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 Q6ZSN1 163 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 SPATA12Q7Z6I5 190 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 AMN1Q8IY45 258 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 Q8N1X5 172 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 DPH3P1Q9H4G8 78 aa9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 APOBP04114 4563 aaKnown RBP9.7□□□□□ -0.86
SPTLC2-202ENST00000554365 S100A8P05109 93 aa9.69□□□□□ -0.86
SPTLC2-202ENST00000554365 HOXA5P20719 270 aa9.69□□□□□ -0.86
SPTLC2-202ENST00000554365 FAM104BQ5XKR9 115 aa9.69□□□□□ -0.86
SPTLC2-202ENST00000554365 ZFP2Q6ZN57 461 aa9.69□□□□□ -0.86
SPTLC2-202ENST00000554365 GNB1LQ9BYB4 327 aa9.69□□□□□ -0.86
SPTLC2-202ENST00000554365 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
SPTLC2-202ENST00000554365 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
SPTLC2-202ENST00000554365 RHODO00212 210 aa9.68□□□□□ -0.86
SPTLC2-202ENST00000554365 RAB4AP20338 218 aa9.68□□□□□ -0.86
SPTLC2-202ENST00000554365 SLAQ13239 276 aa9.68□□□□□ -0.86
SPTLC2-202ENST00000554365 FHL2Q14192 279 aa9.68□□□□□ -0.86
SPTLC2-202ENST00000554365 COX19Q49B96 90 aa9.68□□□□□ -0.86
SPTLC2-202ENST00000554365 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
SPTLC2-202ENST00000554365 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
SPTLC2-202ENST00000554365 GATA1P15976 413 aaPredicted RBP9.67□□□□□ -0.86
SPTLC2-202ENST00000554365 RAB5AP20339 215 aa9.67□□□□□ -0.86
SPTLC2-202ENST00000554365 RAB4BP61018 213 aa9.67□□□□□ -0.86
SPTLC2-202ENST00000554365 MRPL51Q4U2R6 128 aaKnown RBP9.67□□□□□ -0.86
SPTLC2-202ENST00000554365 SMIM15Q7Z3B0 74 aa9.67□□□□□ -0.86
SPTLC2-202ENST00000554365 PHOX2AO14813 284 aa9.66□□□□□ -0.86
SPTLC2-202ENST00000554365 CIDEAO60543 219 aa9.66□□□□□ -0.86
SPTLC2-202ENST00000554365 HLA-DQA1P01909 254 aa9.66□□□□□ -0.86
SPTLC2-202ENST00000554365 MGPP08493 103 aa9.66□□□□□ -0.86
SPTLC2-202ENST00000554365 SMIM17P0DL12 118 aa9.66□□□□□ -0.86
SPTLC2-202ENST00000554365 SUMO4Q6EEV6 95 aa9.66□□□□□ -0.86
SPTLC2-202ENST00000554365 Q9H8V8 135 aa9.66□□□□□ -0.86
SPTLC2-202ENST00000554365 TRAV26-2A0A0B4J265 109 aa9.65□□□□□ -0.86
SPTLC2-202ENST00000554365 MT-ND6P03923 174 aa9.65□□□□□ -0.86
SPTLC2-202ENST00000554365 ZNF56Q15929 161 aa9.65□□□□□ -0.86
SPTLC2-202ENST00000554365 TTC32Q5I0X7 151 aa9.65□□□□□ -0.86
SPTLC2-202ENST00000554365 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
SPTLC2-202ENST00000554365 Q9UF83 564 aa9.65□□□□□ -0.86
SPTLC2-202ENST00000554365 SMKR1H3BMG3 65 aa9.64□□□□□ -0.87
SPTLC2-202ENST00000554365 M0QY20 66 aa9.64□□□□□ -0.87
SPTLC2-202ENST00000554365 APCSP02743 223 aa9.64□□□□□ -0.87
SPTLC2-202ENST00000554365 RPS10P46783 165 aaKnown RBP9.64□□□□□ -0.87
SPTLC2-202ENST00000554365 KIAA1644Q3SXP7 199 aa9.64□□□□□ -0.87
SPTLC2-202ENST00000554365 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
SPTLC2-202ENST00000554365 TRAPPC1Q9Y5R8 145 aa9.64□□□□□ -0.87
SPTLC2-202ENST00000554365 TRAV26-1A0A087WT03 109 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 TRGV4A0A0C4DH28 118 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 A0A0J9YY99 117 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 F5H697 171 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 NCR2O95944 276 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 CRYBA4P53673 196 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 KRTAP10-2P60368 255 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 FABP9Q0Z7S8 132 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 SLC25A29Q8N8R3 303 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 NRACQ8N912 160 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 FRZBQ92765 325 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 MRAP2Q96G30 205 aa9.63□□□□□ -0.87
SPTLC2-202ENST00000554365 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
SPTLC2-202ENST00000554365 D6R8Y8 96 aa9.62□□□□□ -0.87
SPTLC2-202ENST00000554365 TRGC2P03986 189 aa9.62□□□□□ -0.87
SPTLC2-202ENST00000554365 RPL39LQ96EH5 51 aaKnown RBP9.62□□□□□ -0.87
SPTLC2-202ENST00000554365 VSIG2Q96IQ7 327 aa9.62□□□□□ -0.87
SPTLC2-202ENST00000554365 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
SPTLC2-202ENST00000554365 K7EQD1 137 aa9.61□□□□□ -0.87
SPTLC2-202ENST00000554365 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.61□□□□□ -0.87
SPTLC2-202ENST00000554365 PRO0255Q9UI72 69 aa9.61□□□□□ -0.87
SPTLC2-202ENST00000554365 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
SPTLC2-202ENST00000554365 NPYP01303 97 aa9.6□□□□□ -0.87
SPTLC2-202ENST00000554365 LINC00694P0DN24 101 aa9.6□□□□□ -0.87
SPTLC2-202ENST00000554365 CKS2P33552 79 aa9.6□□□□□ -0.87
SPTLC2-202ENST00000554365 ESRGQ1W209 222 aa9.6□□□□□ -0.87
SPTLC2-202ENST00000554365 NEXN-AS1Q8NBZ9 246 aa9.6□□□□□ -0.87
SPTLC2-202ENST00000554365 ALKBH7Q9BT30 221 aaPredicted RBP9.6□□□□□ -0.87
SPTLC2-202ENST00000554365 PPBPP02775 128 aa9.59□□□□□ -0.87
SPTLC2-202ENST00000554365 BTF3P20290 206 aaKnown RBP9.59□□□□□ -0.87
SPTLC2-202ENST00000554365 RHOHQ15669 191 aa9.59□□□□□ -0.87
SPTLC2-202ENST00000554365 ORMDL3Q8N138 153 aa9.59□□□□□ -0.87
SPTLC2-202ENST00000554365 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
SPTLC2-202ENST00000554365 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
SPTLC2-202ENST00000554365 HERC1Q15751 4861 aa9.59□□□□□ -0.87
SPTLC2-202ENST00000554365 TRBV10-1A0A0K0K1A3 114 aa9.58□□□□□ -0.88
SPTLC2-202ENST00000554365 TRBV6-5A0A0K0K1A5 114 aa9.58□□□□□ -0.88
SPTLC2-202ENST00000554365 H7C1H1 209 aa9.58□□□□□ -0.88
SPTLC2-202ENST00000554365 PAX4O43316 350 aa9.58□□□□□ -0.88
SPTLC2-202ENST00000554365 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
SPTLC2-202ENST00000554365 NIT2Q9NQR4 276 aa9.58□□□□□ -0.88
SPTLC2-202ENST00000554365 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
SPTLC2-202ENST00000554365 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
SPTLC2-202ENST00000554365 GYPEP15421 78 aa9.57□□□□□ -0.88
SPTLC2-202ENST00000554365 SRIP30626 198 aa9.57□□□□□ -0.88
SPTLC2-202ENST00000554365 OR10J3Q5JRS4 329 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms