RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 F2Z2F3 143 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 CHKB-CPT1BH3BT56 60 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 H7BZZ5 65 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 ACYP1P07311 99 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 EDDM3BP56851 147 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 KRTAP10-12P60413 245 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 Q8N6K4 173 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 ORMDL1Q9P0S3 153 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 PRO0461Q9UI25 63 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 KDM6BO15054 1643 aa2.59□□□□□ -1.99
HMGB3P21-201ENST00000452483 CASP8AP2Q9UKL3 1982 aa2.59□□□□□ -2
HMGB3P21-201ENST00000452483 PPRC1Q5VV67 1664 aaKnown RBP2.59□□□□□ -2
HMGB3P21-201ENST00000452483 BLMP54132 1417 aaPredicted RBP2.59□□□□□ -2
HMGB3P21-201ENST00000452483 CUL9Q8IWT3 2517 aa2.59□□□□□ -2
HMGB3P21-201ENST00000452483 IQGAP3Q86VI3 1631 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 PTPN23Q9H3S7 1636 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 HEATR5BQ9P2D3 2071 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 BCE1O60756 84 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 COX6CP09669 75 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 DSCR10P59022 87 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 UBE2D3P61077 147 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 CNBPP62633 177 aaKnown RBP2.58□□□□□ -2
HMGB3P21-201ENST00000452483 UBE2D2P62837 147 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 SFTA2Q6UW10 78 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 DMAC1Q96GE9 116 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 ODF3Q96PU9 254 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 LIMD2Q9BT23 127 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 MRPL36Q9P0J6 103 aaKnown RBP2.58□□□□□ -2
HMGB3P21-201ENST00000452483 CCL26Q9Y258 94 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 ABCA10Q8WWZ4 1543 aa2.58□□□□□ -2
HMGB3P21-201ENST00000452483 ABCA8O94911 1581 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 CFAP74Q9C0B2 1584 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 LAMB4A4D0S4 1761 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 LAMB2P55268 1798 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 PLXNA1Q9UIW2 1896 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 TRAV22A0A0B4J277 110 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 SMIM13P0DJ93 91 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 UBE2D1P51668 147 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 VMO1Q7Z5L0 202 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 LINC00643Q86TS7 51 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 Q8N9L7 120 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 SLIT3O75094 1523 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 ABCC1P33527 1531 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.57□□□□□ -2
HMGB3P21-201ENST00000452483 DUOX2Q9NRD8 1548 aa2.57□□□□□ -2
HMGB3P21-201ENST00000452483 MYO5CQ9NQX4 1742 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 DOCK2Q92608 1830 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 NUMA1Q14980 2115 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 IGLV4-60A0A075B6I1 120 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 IGKV2D-24A0A075B6R9 120 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 TRBV6-8A0A0A6YYG3 113 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 NUPR2A6NF83 97 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 SDHAF1A6NFY7 115 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 EFNA4P52798 201 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 KLKP1Q107X0 134 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 TMEM170BQ5T4T1 132 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 CFAP126Q5VTH2 177 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 FAM223AQ8IWN6 122 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 BPESC1Q9GZL8 116 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 IQSEC2Q5JU85 1478 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 MYO3AQ8NEV4 1616 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 KNDC1Q76NI1 1749 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 MICAL3Q7RTP6 2002 aa2.56□□□□□ -2
HMGB3P21-201ENST00000452483 TMEM131LA2VDJ0 1609 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 C7orf77A4D0Y5 90 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 SLIT2O94813 1529 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 ZNF56Q15929 161 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 Q5VV11 94 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 ABCC2Q92887 1545 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 LINC01600Q96MT4 127 aa2.55□□□□□ -2
HMGB3P21-201ENST00000452483 EXPH5Q8NEV8 1989 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 TOP2BQ02880 1626 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 SETBP1Q9Y6X0 1596 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 KCPQ6ZWJ8 1503 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 TRBV25-1A0A075B6N4 114 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 A0A087WWC5 75 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 A0A1W2PNU3 283 aaPredicted RBP2.54□□□□□ -2
HMGB3P21-201ENST00000452483 UMAD1C9J7I0 102 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 PATE1Q8WXA2 126 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 DYNLRB1Q9NP97 96 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 CACNA1DQ01668 2161 aa2.54□□□□□ -2
HMGB3P21-201ENST00000452483 CDK13Q14004 1512 aaKnown RBP2.53□□□□□ -2
HMGB3P21-201ENST00000452483 A0A0G2JQZ4 141 aa2.53□□□□□ -2
HMGB3P21-201ENST00000452483 ZNF815PA8K554 130 aa2.53□□□□□ -2
HMGB3P21-201ENST00000452483 TMEM14DPA8MWL7 114 aa2.53□□□□□ -2
HMGB3P21-201ENST00000452483 RTL8CO15255 209 aa2.53□□□□□ -2
HMGB3P21-201ENST00000452483 MADDQ8WXG6 1647 aa2.53□□□□□ -2
HMGB3P21-201ENST00000452483 HEATR1Q9H583 2144 aaKnown RBP2.53□□□□□ -2.01
HMGB3P21-201ENST00000452483 EFCAB5A4FU69 1503 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 NRXN1Q9ULB1 1477 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 RP1P56715 2156 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 A0A087WXM4 84 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 A0A0J9YY99 117 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 ELOF1P60002 83 aaKnown RBP2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 PSMG4Q5JS54 123 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 TVP23CQ96ET8 276 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 MYOFQ9NZM1 2061 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 CUX1P39880 1505 aa2.52□□□□□ -2.01
HMGB3P21-201ENST00000452483 KIF21AQ7Z4S6 1674 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms