RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 OBSL1O75147 1896 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 TMEM256-PLSCR3K7ERE1 68 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 TP53TG3Q9ULZ0 132 aa13.73□□□□□ -0.21
COL5A3-201ENST00000264828 H3BT86 120 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 SPATA12Q7Z6I5 190 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 MED14OSP0DP75 135 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 C10orf105Q8TEF2 133 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 SIRPDQ9H106 197 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
COL5A3-201ENST00000264828 FANCD2OSQ96PS1 177 aa13.71□□□□□ -0.21
COL5A3-201ENST00000264828 Q6ZSR3 168 aa13.71□□□□□ -0.21
COL5A3-201ENST00000264828 CXCL5P42830 114 aa13.71□□□□□ -0.22
COL5A3-201ENST00000264828 UPK3BQ9BT76 320 aa13.71□□□□□ -0.22
COL5A3-201ENST00000264828 C19orf71A6NCJ1 209 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 CHD3Q12873 2000 aaKnown RBP13.7□□□□□ -0.22
COL5A3-201ENST00000264828 C4orf3Q8WVX3 66 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 ABCA4P78363 2273 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 COL4A3Q01955 1670 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 COX7BP24311 80 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 MIAQ16674 131 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
COL5A3-201ENST00000264828 K7EMT4 169 aa13.69□□□□□ -0.22
COL5A3-201ENST00000264828 ZNF80P51504 273 aaPredicted RBP13.69□□□□□ -0.22
COL5A3-201ENST00000264828 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
COL5A3-201ENST00000264828 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
COL5A3-201ENST00000264828 TP73-AS1Q9UF72 201 aa13.69□□□□□ -0.22
COL5A3-201ENST00000264828 CACNA1BQ00975 2339 aa13.68□□□□□ -0.22
COL5A3-201ENST00000264828 GPHB5Q86YW7 130 aa13.68□□□□□ -0.22
COL5A3-201ENST00000264828 MPLKIPQ8TAP9 179 aa13.68□□□□□ -0.22
COL5A3-201ENST00000264828 C4orf48Q5BLP8 95 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 LINC00322Q6ZN03 302 aaPredicted RBP13.67□□□□□ -0.22
COL5A3-201ENST00000264828 NCOR1O75376 2440 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 IGKV4-1P06312 121 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 SDIM1Q6ZPB5 146 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 ADAMTS9Q9P2N4 1935 aa13.67□□□□□ -0.22
COL5A3-201ENST00000264828 A0A0J9YXY3 114 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 IGLV1-47P01700 117 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 SPTSSBQ8NFR3 76 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 A0A0J9YX75 114 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 SCXQ7RTU7 201 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 TMEM263Q8WUH6 116 aaKnown RBP13.66□□□□□ -0.22
COL5A3-201ENST00000264828 MT-ATP8P03928 68 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 GDF5OSQ5U4N7 250 aa13.66□□□□□ -0.22
COL5A3-201ENST00000264828 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 IGKV1D-37A0A075B6S9 117 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 IGKV2-24A0A0C4DH68 120 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 ACACAQ13085 2346 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
COL5A3-201ENST00000264828 SLPIP03973 132 aa13.64□□□□□ -0.23
COL5A3-201ENST00000264828 SEC61GP60059 68 aa13.64□□□□□ -0.23
COL5A3-201ENST00000264828 LINC00643Q86TS7 51 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 C11orf1Q9H5F2 150 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 LINC00269Q8N2A0 174 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 SPRY4Q9C004 299 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 MSMPQ1L6U9 139 aa13.63□□□□□ -0.23
COL5A3-201ENST00000264828 A0A1B0GXF2 115 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 BPY2O14599 106 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 CCDC140Q96MF4 163 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 A0A096LNI7 61 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 DAZAP2Q15038 168 aaPredicted RBP13.62□□□□□ -0.23
COL5A3-201ENST00000264828 ZFAND2AQ8N6M9 145 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 B9D2Q9BPU9 175 aa13.62□□□□□ -0.23
COL5A3-201ENST00000264828 IGLV2-8P01709 118 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 MYCNOSP40205 109 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 PRO0255Q9UI72 69 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 WISP2O76076 250 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 NDUFV3P56181 108 aaKnown RBP13.61□□□□□ -0.23
COL5A3-201ENST00000264828 Q6ZTI0 123 aa13.61□□□□□ -0.23
COL5A3-201ENST00000264828 LINC00467Q9BRT7 94 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 IGLC6P0CF74 106 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 C20orf197Q8N268 126 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 HIGD2AQ9BW72 106 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 NACAE9PAV3 2078 aa13.6□□□□□ -0.23
COL5A3-201ENST00000264828 HIST2H2BDQ6DRA6 164 aa13.59□□□□□ -0.23
COL5A3-201ENST00000264828 MALRD1Q5VYJ5 2156 aa13.59□□□□□ -0.23
COL5A3-201ENST00000264828 A6NDX4 124 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 MLST8Q9BVC4 326 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 TMEM131Q92545 1883 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 ZNF106Q9H2Y7 1883 aaKnown RBP13.58□□□□□ -0.24
COL5A3-201ENST00000264828 REG3AQ06141 175 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 ENHOQ6UWT2 76 aa13.58□□□□□ -0.24
COL5A3-201ENST00000264828 MED13Q9UHV7 2174 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 CACNA1GO43497 2377 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 IGF1P05019 195 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 PRORYQ9H606 182 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 SMAD5-AS1Q9Y6J3 95 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 C20orf173Q96LM9 149 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 Q8NA96 180 aa13.57□□□□□ -0.24
COL5A3-201ENST00000264828 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
COL5A3-201ENST00000264828 NOTCH3Q9UM47 2321 aa13.56□□□□□ -0.24
COL5A3-201ENST00000264828 PDE6GP18545 87 aa13.56□□□□□ -0.24
COL5A3-201ENST00000264828 SPANXB1Q9NS25 103 aaPredicted RBP13.55□□□□□ -0.24
COL5A3-201ENST00000264828 TMEM89A2RUT3 159 aa13.55□□□□□ -0.24
COL5A3-201ENST00000264828 DNAJC9-AS1A6NH13 148 aa13.55□□□□□ -0.24
COL5A3-201ENST00000264828 PIK3CD-AS1Q5SR53 167 aa13.55□□□□□ -0.24
COL5A3-201ENST00000264828 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms