RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PTPN23Q9H3S7 1636 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 TRPM2O94759 1503 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 KIAA1107Q9UPP5 1409 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 TCRBV4S1A1TA0A5B7 111 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 E7EUB6 86 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 C17orf112F2Z3M2 114 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 IFNA4P05014 189 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 OR10J4P0C629 311 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 DSCR4P56555 118 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-221ENST00000556534 TMEM14EPQ6UXP3 125 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 OR5D14Q8NGL3 314 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 OR9Q1Q8NGQ5 310 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 Q8TAT8 98 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 HYLS1Q96M11 299 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 C19orf12Q9NSK7 152 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 MED9Q9NWA0 146 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 CEP250Q9BV73 2442 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 FAM186AA6NE01 2351 aa1.27□□□□□ -2.21
SCFD1-221ENST00000556534 SIP14410 1827 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 RBBP6Q7Z6E9 1792 aaKnown RBP1.26□□□□□ -2.21
SCFD1-221ENST00000556534 IGSF10Q6WRI0 2623 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 LMTK2Q8IWU2 1503 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 ATP7BP35670 1465 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 CACNA1HO95180 2353 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 A0A087WSZ3 146 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 ZNF736B4DX44 427 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-221ENST00000556534 M0R233 179 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 KPNA4O00629 521 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-221ENST00000556534 HYPMO75409 117 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 ARL14EPLP0DKL9 152 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 FABP2P12104 132 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 ZNF93P35789 620 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-221ENST00000556534 RAB5CP51148 216 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 KRTAP26-1Q6PEX3 210 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 C4orf22Q6V702 233 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 ZNF833PQ6ZTB9 187 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 PYDC1Q8WXC3 89 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 RAB37Q96AX2 223 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 GGACTQ9BVM4 153 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 HSPB11Q9Y547 144 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 NOTCH1P46531 2555 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 SBF2Q86WG5 1849 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 PAPPA2Q9BXP8 1791 aa1.26□□□□□ -2.21
SCFD1-221ENST00000556534 PKD1L1Q8TDX9 2849 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 CCDC18Q5T9S5 1454 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 TNS3Q68CZ2 1445 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 SPG11Q96JI7 2443 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 A0A087WX48 190 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 TRAV10A0A0B4J240 114 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 IGHV1-58A0A0C4DH39 117 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 CCDC160A6NGH7 325 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 FAM107AO95990 144 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 CD2P06729 351 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 SDC2P34741 201 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 CDK6Q00534 326 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 FAM216BQ8N7L0 139 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 SKA2Q8WVK7 121 aaPredicted RBP1.25□□□□□ -2.21
SCFD1-221ENST00000556534 PATE1Q8WXA2 126 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 NIT2Q9NQR4 276 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 NBEAL2Q6ZNJ1 2754 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 LRRIQ1Q96JM4 1722 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 CEP295Q9C0D2 2601 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 CSMD1Q96PZ7 3565 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 DMXL2Q8TDJ6 3036 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 ARHGAP5Q13017 1502 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 SPTBN2O15020 2390 aa1.25□□□□□ -2.21
SCFD1-221ENST00000556534 BOD1L1Q8NFC6 3051 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 CASKIN1Q8WXD9 1431 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 COL14A1Q05707 1796 aaKnown RBP1.24□□□□□ -2.21
SCFD1-221ENST00000556534 LRRK2Q5S007 2527 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 TLN1Q9Y490 2541 aaKnown RBP1.24□□□□□ -2.21
SCFD1-221ENST00000556534 MYO5CQ9NQX4 1742 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 CREBBPQ92793 2442 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 IGKV3D-7A0A0C4DH55 119 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 IGKV3OR2-268A0A0C4DH90 116 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 hDV103S1A0JD37 113 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 OR2T8A6NH00 312 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 MT-ND6P03923 174 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 ALX1Q15699 326 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 TEX261Q6UWH6 196 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 TEX29Q8N6K0 151 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 TMEM35BQ8NCS4 154 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 DIRC1Q969H9 104 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 MUCL1Q96DR8 90 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 TP53RKQ96S44 253 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 TCEAL2Q9H3H9 227 aaPredicted RBP1.24□□□□□ -2.21
SCFD1-221ENST00000556534 RASL12Q9NYN1 266 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 TAS2R7Q9NYW3 318 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 KLK9Q9UKQ9 250 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 U3KQ87 197 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 DNHD1Q96M86 4753 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 MED13Q9UHV7 2174 aa1.24□□□□□ -2.21
SCFD1-221ENST00000556534 KNDC1Q76NI1 1749 aa1.23□□□□□ -2.21
SCFD1-221ENST00000556534 CHD3Q12873 2000 aaKnown RBP1.23□□□□□ -2.21
SCFD1-221ENST00000556534 ARHGEF10O15013 1369 aa1.23□□□□□ -2.21
SCFD1-221ENST00000556534 RFX7Q2KHR2 1363 aa1.23□□□□□ -2.21
SCFD1-221ENST00000556534 USP54Q70EL1 1684 aa1.23□□□□□ -2.21
SCFD1-221ENST00000556534 QRICH2Q9H0J4 1663 aa1.23□□□□□ -2.21
SCFD1-221ENST00000556534 PDZD2O15018 2839 aa1.23□□□□□ -2.21
SCFD1-221ENST00000556534 MYH1P12882 1939 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 253.9 ms