RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TMEM8BA6NDV4 472 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 C19orf84I3L1E1 186 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 ATP5J2P56134 94 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 TM4SF20Q53R12 229 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 ZC2HC1BQ5TFG8 222 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 POM121L12Q8N7R1 296 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 TOMM6Q96B49 74 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 RHPN1-AS1Q9BWJ2 59 aa9.9□□□□□ -0.82
CPSF7-223ENST00000544669 ABCA4P78363 2273 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 F8VRH5 84 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 LINC01619G3V211 115 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 UNQ9165/PRO28630Q6UXU0 137 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 BRD3OSQ6XYD6 125 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 ARHGAP32A7KAX9 2087 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 J3QLI3 93 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 NXPH4O95158 308 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 FABP2P12104 132 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 ERASQ7Z444 233 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 PCP2Q8IVA1 136 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 C20orf173Q96LM9 149 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 SPOCK3Q9BQ16 436 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 TM2D2Q9BX73 214 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 TMEM160Q9NX00 188 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 TP73-AS1Q9UF72 201 aa9.89□□□□□ -0.83
CPSF7-223ENST00000544669 TRAV8-6A0A0B4J262 113 aa9.88□□□□□ -0.83
CPSF7-223ENST00000544669 K7EP34 96 aa9.88□□□□□ -0.83
CPSF7-223ENST00000544669 GATA1P15976 413 aaPredicted RBP9.88□□□□□ -0.83
CPSF7-223ENST00000544669 FAM159AQ6UWV7 190 aa9.88□□□□□ -0.83
CPSF7-223ENST00000544669 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
CPSF7-223ENST00000544669 IGHV4OR15-8A0A075B7B6 117 aa9.87□□□□□ -0.83
CPSF7-223ENST00000544669 A0A087WW49 117 aa9.87□□□□□ -0.83
CPSF7-223ENST00000544669 RNASE4P34096 147 aaKnown RBP9.87□□□□□ -0.83
CPSF7-223ENST00000544669 ANXA2RQ3ZCQ2 193 aa9.87□□□□□ -0.83
CPSF7-223ENST00000544669 WFDC3Q8IUB2 231 aa9.87□□□□□ -0.83
CPSF7-223ENST00000544669 MRPL35Q9NZE8 188 aaKnown RBP9.87□□□□□ -0.83
CPSF7-223ENST00000544669 LINC00527Q9UJ94 153 aa9.87□□□□□ -0.83
CPSF7-223ENST00000544669 IGHV3OR16-10A0A075B7F0 116 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 KLLNB2CW77 178 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 GAS8-AS1O95177 125 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 IGHV4-38-2P0DP08 117 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 UQCRFS1P47985 274 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 RBX1P62877 108 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 CFHR3Q02985 330 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 LY6EQ16553 131 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 OCIAD2Q56VL3 154 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 RNASE8Q8TDE3 154 aaKnown RBP9.86□□□□□ -0.83
CPSF7-223ENST00000544669 CHTOPQ9Y3Y2 248 aaKnown RBP9.86□□□□□ -0.83
CPSF7-223ENST00000544669 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 A0A1W2PPM0 123 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 H3BUT2 72 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 SNRPD3P62318 126 aaKnown RBP9.86□□□□□ -0.83
CPSF7-223ENST00000544669 UFSP1Q6NVU6 142 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 CEND1Q8N111 149 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 ASPMQ8IZT6 3477 aa9.86□□□□□ -0.83
CPSF7-223ENST00000544669 SPTA1P02549 2419 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 OR11H12B2RN74 326 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 GCSHP23434 173 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 PRR9Q5T870 116 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 SYT8Q8NBV8 401 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 OR11H1Q8NG94 326 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 OR11H2Q8NH07 326 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 RASL10AQ92737 203 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 BSNQ9UPA5 3926 aa9.85□□□□□ -0.83
CPSF7-223ENST00000544669 TRAV26-2A0A0B4J265 109 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 VCYO14598 125 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 TRBV12-3P01733 135 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 IGHV3-11P01762 117 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
CPSF7-223ENST00000544669 TMEM141Q96I45 108 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 CYSLTR1Q9Y271 337 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 DUSP14O95147 198 aaKnown RBP9.84□□□□□ -0.83
CPSF7-223ENST00000544669 SAMD5Q5TGI4 173 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 LINC01356Q8N9X3 169 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 NEXN-AS1Q8NBZ9 246 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 SPCS1Q9Y6A9 102 aa9.84□□□□□ -0.83
CPSF7-223ENST00000544669 IGHV4-30-2A0A087WSY4 118 aa9.83□□□□□ -0.84
CPSF7-223ENST00000544669 MGPP08493 103 aa9.83□□□□□ -0.84
CPSF7-223ENST00000544669 HERVK_113P61574 105 aa9.83□□□□□ -0.84
CPSF7-223ENST00000544669 BLCAPP62952 87 aa9.83□□□□□ -0.84
CPSF7-223ENST00000544669 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
CPSF7-223ENST00000544669 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 A6NJY4 79 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 LGALS9O00182 355 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 RNASE3P12724 160 aaKnown RBP9.82□□□□□ -0.84
CPSF7-223ENST00000544669 PSMB8P28062 276 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 ADGRG4Q8IZF6 3080 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 TRBV6-5A0A0K0K1A5 114 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 MYMXA0A1B0GTQ4 84 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 PCP4P48539 62 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 DCANP1Q8TF63 244 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 CSTL1Q9H114 145 aa9.82□□□□□ -0.84
CPSF7-223ENST00000544669 E9PLD3 99 aa9.81□□□□□ -0.84
CPSF7-223ENST00000544669 J3KRW8 73 aa9.81□□□□□ -0.84
CPSF7-223ENST00000544669 ELANEP08246 267 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms